RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 ASAP1Q9ULH1 1129 aa27.36■■□□□ 1.97
UPK3B-205ENST00000490360 APLP1P51693 650 aa27.35■■□□□ 1.97
UPK3B-205ENST00000490360 ITPK1Q13572 414 aa27.35■■□□□ 1.97
UPK3B-205ENST00000490360 PHKG2P15735 406 aa27.34■■□□□ 1.97
UPK3B-205ENST00000490360 EYA1Q99502 592 aa27.34■■□□□ 1.97
UPK3B-205ENST00000490360 CARD14Q9BXL6 1004 aa27.34■■□□□ 1.97
UPK3B-205ENST00000490360 TRAPPC3LQ5T215 181 aa27.33■■□□□ 1.97
UPK3B-205ENST00000490360 RTCBQ9Y3I0 505 aaKnown RBP27.33■■□□□ 1.97
UPK3B-205ENST00000490360 TOMM70O94826 608 aa27.32■■□□□ 1.96
UPK3B-205ENST00000490360 ADRA2BP18089 450 aa27.32■■□□□ 1.96
UPK3B-205ENST00000490360 ATG3Q9NT62 314 aa27.32■■□□□ 1.96
UPK3B-205ENST00000490360 PXDNLA1KZ92 1463 aa27.32■■□□□ 1.96
UPK3B-205ENST00000490360 ZNF831Q5JPB2 1677 aa27.31■■□□□ 1.96
UPK3B-205ENST00000490360 RC3H1Q5TC82 1133 aaKnown RBP27.29■■□□□ 1.96
UPK3B-205ENST00000490360 ERVV-2B6SEH9 535 aa27.28■■□□□ 1.96
UPK3B-205ENST00000490360 CCDC87Q9NVE4 849 aa27.28■■□□□ 1.96
UPK3B-205ENST00000490360 BCS1LQ9Y276 419 aa27.28■■□□□ 1.96
UPK3B-205ENST00000490360 C10orf71Q711Q0 1435 aa27.27■■□□□ 1.96
UPK3B-205ENST00000490360 HSP90AB1P08238 724 aaKnown RBP27.27■■□□□ 1.96
UPK3B-205ENST00000490360 KIAA1551Q9HCM1 1747 aa27.27■■□□□ 1.96
UPK3B-205ENST00000490360 KDRP35968 1356 aa27.26■■□□□ 1.95
UPK3B-205ENST00000490360 N4BP2Q86UW6 1770 aaPredicted RBP27.26■■□□□ 1.95
UPK3B-205ENST00000490360 ARHGAP27Q6ZUM4 889 aa27.25■■□□□ 1.95
UPK3B-205ENST00000490360 POLKQ9UBT6 870 aa27.25■■□□□ 1.95
UPK3B-205ENST00000490360 CNTNAP4Q9C0A0 1308 aa27.24■■□□□ 1.95
UPK3B-205ENST00000490360 A0A0G2JLW4 131 aa27.24■■□□□ 1.95
UPK3B-205ENST00000490360 RFC4P35249 363 aa27.24■■□□□ 1.95
UPK3B-205ENST00000490360 DCAF5Q96JK2 942 aa27.24■■□□□ 1.95
UPK3B-205ENST00000490360 PARP3Q9Y6F1 533 aa27.24■■□□□ 1.95
UPK3B-205ENST00000490360 ARHGEF1Q92888 912 aaKnown RBP27.23■■□□□ 1.95
UPK3B-205ENST00000490360 C4AP0C0L4 1744 aa27.22■■□□□ 1.95
UPK3B-205ENST00000490360 RPS6KA4O75676 772 aa27.22■■□□□ 1.95
UPK3B-205ENST00000490360 FCHSD2O94868 740 aa27.21■■□□□ 1.95
UPK3B-205ENST00000490360 DNAJC5GQ8N7S2 189 aa27.21■■□□□ 1.95
UPK3B-205ENST00000490360 RBM42Q9BTD8 480 aaKnown RBP27.21■■□□□ 1.95
UPK3B-205ENST00000490360 COL5A3P25940 1745 aaPredicted RBP27.21■■□□□ 1.95
UPK3B-205ENST00000490360 GYS1P13807 737 aa27.2■■□□□ 1.94
UPK3B-205ENST00000490360 DPEP1P16444 411 aa27.2■■□□□ 1.94
UPK3B-205ENST00000490360 BRCA1P38398 1863 aaKnown RBP27.2■■□□□ 1.94
UPK3B-205ENST00000490360 EIF4A2Q14240 407 aaKnown RBP27.2■■□□□ 1.94
UPK3B-205ENST00000490360 RBM46Q8TBY0 533 aaKnown RBP27.19■■□□□ 1.94
UPK3B-205ENST00000490360 ARFGEF1Q9Y6D6 1849 aa27.18■■□□□ 1.94
UPK3B-205ENST00000490360 PLEKHO1Q53GL0 409 aaPredicted RBP27.18■■□□□ 1.94
UPK3B-205ENST00000490360 SLC4A9Q96Q91 983 aa27.18■■□□□ 1.94
UPK3B-205ENST00000490360 AMOTQ4VCS5 1084 aa27.17■■□□□ 1.94
UPK3B-205ENST00000490360 C16orf71Q8IYS4 520 aaPredicted RBP27.17■■□□□ 1.94
UPK3B-205ENST00000490360 NMRK2Q9NPI5 230 aa27.16■■□□□ 1.94
UPK3B-205ENST00000490360 PIM2Q9P1W9 311 aa27.16■■□□□ 1.94
UPK3B-205ENST00000490360 CABP4P57796 275 aa27.15■■□□□ 1.94
UPK3B-205ENST00000490360 FSTL1Q12841 308 aa27.14■■□□□ 1.94
UPK3B-205ENST00000490360 KDM2BQ8NHM5 1336 aa27.14■■□□□ 1.93
UPK3B-205ENST00000490360 C9orf131Q5VYM1 1079 aa27.13■■□□□ 1.93
UPK3B-205ENST00000490360 MYH14Q7Z406 1995 aaKnown RBP27.13■■□□□ 1.93
UPK3B-205ENST00000490360 KCNA3P22001 575 aa27.12■■□□□ 1.93
UPK3B-205ENST00000490360 DALRD3Q5D0E6 543 aaKnown RBP27.12■■□□□ 1.93
UPK3B-205ENST00000490360 WDR90Q96KV7 1748 aa27.12■■□□□ 1.93
UPK3B-205ENST00000490360 ZNF530Q6P9A1 599 aaPredicted RBP27.11■■□□□ 1.93
UPK3B-205ENST00000490360 TIMELESSQ9UNS1 1208 aa27.1■■□□□ 1.93
UPK3B-205ENST00000490360 TNNT2P45379 298 aaPredicted RBP27.09■■□□□ 1.93
UPK3B-205ENST00000490360 MTHFSP49914 203 aa27.09■■□□□ 1.93
UPK3B-205ENST00000490360 KDM6AO15550 1401 aaPredicted RBP27.08■■□□□ 1.93
UPK3B-205ENST00000490360 CRKLP46109 303 aaKnown RBP27.08■■□□□ 1.93
UPK3B-205ENST00000490360 C1orf141Q5JVX7 400 aa27.08■■□□□ 1.93
UPK3B-205ENST00000490360 KLRG1Q96E93 195 aa27.07■■□□□ 1.92
UPK3B-205ENST00000490360 USP42Q9H9J4 1324 aaKnown RBP27.07■■□□□ 1.92
UPK3B-205ENST00000490360 PTCD1O75127 700 aaKnown RBP27.06■■□□□ 1.92
UPK3B-205ENST00000490360 JMYQ8N9B5 988 aa27.05■■□□□ 1.92
UPK3B-205ENST00000490360 RNF181Q9P0P0 153 aa27.05■■□□□ 1.92
UPK3B-205ENST00000490360 FKBP8Q14318 412 aa27.04■■□□□ 1.92
UPK3B-205ENST00000490360 ZC3H4Q9UPT8 1303 aaKnown RBP27.04■■□□□ 1.92
UPK3B-205ENST00000490360 NFATC2IPQ8NCF5 419 aa27.03■■□□□ 1.92
UPK3B-205ENST00000490360 TNRC6CQ9HCJ0 1690 aaKnown RBP27.03■■□□□ 1.92
UPK3B-205ENST00000490360 KCPQ6ZWJ8 1503 aa27.01■■□□□ 1.91
UPK3B-205ENST00000490360 DDR1Q08345 913 aa27.01■■□□□ 1.91
UPK3B-205ENST00000490360 SRP68Q9UHB9 627 aaKnown RBP27.01■■□□□ 1.91
UPK3B-205ENST00000490360 SBF1O95248 1867 aa27.01■■□□□ 1.91
UPK3B-205ENST00000490360 ZPR1O75312 459 aa27■■□□□ 1.91
UPK3B-205ENST00000490360 POLR3GLQ9BT43 218 aa27■■□□□ 1.91
UPK3B-205ENST00000490360 TM4SF1P30408 202 aa26.99■■□□□ 1.91
UPK3B-205ENST00000490360 SMC1BQ8NDV3 1235 aa26.99■■□□□ 1.91
UPK3B-205ENST00000490360 RRAGCQ9HB90 399 aa26.99■■□□□ 1.91
UPK3B-205ENST00000490360 TJP1Q07157 1748 aa26.99■■□□□ 1.91
UPK3B-205ENST00000490360 POLRMTO00411 1230 aaKnown RBP26.98■■□□□ 1.91
UPK3B-205ENST00000490360 INTS5Q6P9B9 1019 aaKnown RBP26.97■■□□□ 1.91
UPK3B-205ENST00000490360 SCN11AQ9UI33 1791 aa26.97■■□□□ 1.91
UPK3B-205ENST00000490360 CHRNA5P30532 468 aa26.96■■□□□ 1.91
UPK3B-205ENST00000490360 SULT6B1Q6IMI4 303 aa26.94■■□□□ 1.9
UPK3B-205ENST00000490360 AEBP1Q8IUX7 1158 aa26.94■■□□□ 1.9
UPK3B-205ENST00000490360 PANK3Q9H999 370 aa26.94■■□□□ 1.9
UPK3B-205ENST00000490360 ADAMTS7Q9UKP4 1686 aa26.94■■□□□ 1.9
UPK3B-205ENST00000490360 MORC1Q86VD1 984 aa26.93■■□□□ 1.9
UPK3B-205ENST00000490360 LMNB1P20700 586 aa26.92■■□□□ 1.9
UPK3B-205ENST00000490360 HTRA3P83110 453 aa26.92■■□□□ 1.9
UPK3B-205ENST00000490360 AKAP4Q5JQC9 854 aa26.92■■□□□ 1.9
UPK3B-205ENST00000490360 USPL1Q5W0Q7 1092 aa26.92■■□□□ 1.9
UPK3B-205ENST00000490360 SOS1Q07889 1333 aaPredicted RBP26.91■■□□□ 1.9
UPK3B-205ENST00000490360 VEGFAP15692 232 aaPredicted RBP26.91■■□□□ 1.9
UPK3B-205ENST00000490360 NARFQ9UHQ1 456 aa26.91■■□□□ 1.9
UPK3B-205ENST00000490360 PCNTO95613 3336 aa26.91■■□□□ 1.9
UPK3B-205ENST00000490360 COL13A1Q5TAT6 717 aaPredicted RBP26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms