RNA–Protein interactions for RNA: ENST00000490359.2

LRCH4-208, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-208ENST00000490359 CABP4P57796 275 aa22.47■■□□□ 1.19
LRCH4-208ENST00000490359 PNPLA7Q6ZV29 1317 aa22.47■■□□□ 1.19
LRCH4-208ENST00000490359 MTHFSDQ2M296 383 aaKnown RBP22.46■■□□□ 1.19
LRCH4-208ENST00000490359 ATG3Q9NT62 314 aa22.46■■□□□ 1.19
LRCH4-208ENST00000490359 GRIN3BO60391 1043 aa22.45■■□□□ 1.18
LRCH4-208ENST00000490359 U2AF1L5P0DN76 240 aaPredicted RBP22.45■■□□□ 1.18
LRCH4-208ENST00000490359 U2AF1Q01081 240 aaKnown RBP eCLIP22.45■■□□□ 1.18
LRCH4-208ENST00000490359 SGIP1Q9BQI5 828 aa22.45■■□□□ 1.18
LRCH4-208ENST00000490359 LOC102724428A0A0B4J2F2 783 aa22.44■■□□□ 1.18
LRCH4-208ENST00000490359 SIK1P57059 783 aa22.44■■□□□ 1.18
LRCH4-208ENST00000490359 MAP3K5Q99683 1374 aa22.44■■□□□ 1.18
LRCH4-208ENST00000490359 RALBP1Q15311 655 aa22.43■■□□□ 1.18
LRCH4-208ENST00000490359 PRKAR2BP31323 418 aa22.42■■□□□ 1.18
LRCH4-208ENST00000490359 NFATC2IPQ8NCF5 419 aa22.42■■□□□ 1.18
LRCH4-208ENST00000490359 GAS2L2Q8NHY3 880 aa22.42■■□□□ 1.18
LRCH4-208ENST00000490359 RSPH6AQ9H0K4 717 aa22.42■■□□□ 1.18
LRCH4-208ENST00000490359 RNMTO43148 476 aaKnown RBP22.41■■□□□ 1.18
LRCH4-208ENST00000490359 COL23A1Q86Y22 540 aaPredicted RBP22.41■■□□□ 1.18
LRCH4-208ENST00000490359 C5P01031 1676 aa22.4■■□□□ 1.18
LRCH4-208ENST00000490359 LGR6Q9HBX8 967 aa22.4■■□□□ 1.18
LRCH4-208ENST00000490359 ATP6V1AP38606 617 aa22.39■■□□□ 1.17
LRCH4-208ENST00000490359 RBM42Q9BTD8 480 aaKnown RBP22.39■■□□□ 1.17
LRCH4-208ENST00000490359 ITPK1Q13572 414 aa22.38■■□□□ 1.17
LRCH4-208ENST00000490359 PHACTR3Q96KR7 559 aa22.38■■□□□ 1.17
LRCH4-208ENST00000490359 SLC52A2Q9HAB3 445 aa22.38■■□□□ 1.17
LRCH4-208ENST00000490359 SCN11AQ9UI33 1791 aa22.38■■□□□ 1.17
LRCH4-208ENST00000490359 FCHSD2O94868 740 aa22.37■■□□□ 1.17
LRCH4-208ENST00000490359 PHF14O94880 888 aa22.37■■□□□ 1.17
LRCH4-208ENST00000490359 LINC00116Q8NCU8 138 aa22.37■■□□□ 1.17
LRCH4-208ENST00000490359 CD2APQ9Y5K6 639 aa22.37■■□□□ 1.17
LRCH4-208ENST00000490359 QSER1Q2KHR3 1735 aa22.37■■□□□ 1.17
LRCH4-208ENST00000490359 TAF1LQ8IZX4 1826 aa22.36■■□□□ 1.17
LRCH4-208ENST00000490359 TUBGCP6Q96RT7 1819 aa22.36■■□□□ 1.17
LRCH4-208ENST00000490359 GNAT3A8MTJ3 354 aa22.36■■□□□ 1.17
LRCH4-208ENST00000490359 SSFA2P28290 1259 aa22.36■■□□□ 1.17
LRCH4-208ENST00000490359 MSL1Q68DK7 614 aa22.36■■□□□ 1.17
LRCH4-208ENST00000490359 C4BP0C0L5 1744 aa22.35■■□□□ 1.17
LRCH4-208ENST00000490359 MRC1P22897 1456 aa22.34■■□□□ 1.17
LRCH4-208ENST00000490359 MYBBP1AQ9BQG0 1328 aaKnown RBP22.34■■□□□ 1.17
LRCH4-208ENST00000490359 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.34■■□□□ 1.17
LRCH4-208ENST00000490359 PTCD1O75127 700 aaKnown RBP22.34■■□□□ 1.17
LRCH4-208ENST00000490359 SLC4A9Q96Q91 983 aa22.34■■□□□ 1.17
LRCH4-208ENST00000490359 GNPATO15228 680 aa22.33■■□□□ 1.17
LRCH4-208ENST00000490359 TRAPPC3LQ5T215 181 aa22.33■■□□□ 1.17
LRCH4-208ENST00000490359 RTCBQ9Y3I0 505 aaKnown RBP22.33■■□□□ 1.17
LRCH4-208ENST00000490359 ADAMTS7Q9UKP4 1686 aa22.32■■□□□ 1.16
LRCH4-208ENST00000490359 ZNF784Q8NCA9 323 aaPredicted RBP22.31■■□□□ 1.16
LRCH4-208ENST00000490359 IL17REQ8NFR9 667 aa22.31■■□□□ 1.16
LRCH4-208ENST00000490359 TEFQ10587 303 aa22.3■■□□□ 1.16
LRCH4-208ENST00000490359 SLC39A6Q13433 755 aa22.3■■□□□ 1.16
LRCH4-208ENST00000490359 ZNF316A6NFI3 1004 aaPredicted RBP22.29■■□□□ 1.16
LRCH4-208ENST00000490359 NEFMP07197 916 aa22.29■■□□□ 1.16
LRCH4-208ENST00000490359 SMIM5Q71RC9 77 aa22.29■■□□□ 1.16
LRCH4-208ENST00000490359 AMIGO3Q86WK7 504 aa22.29■■□□□ 1.16
LRCH4-208ENST00000490359 NLGN1Q8N2Q7 840 aa22.29■■□□□ 1.16
LRCH4-208ENST00000490359 ZNF831Q5JPB2 1677 aa22.28■■□□□ 1.16
LRCH4-208ENST00000490359 RFC4P35249 363 aa22.28■■□□□ 1.16
LRCH4-208ENST00000490359 VIRMAQ69YN4 1812 aaKnown RBP22.28■■□□□ 1.16
LRCH4-208ENST00000490359 ADRA2BP18089 450 aa22.27■■□□□ 1.16
LRCH4-208ENST00000490359 RTF1Q92541 710 aaKnown RBP22.27■■□□□ 1.16
LRCH4-208ENST00000490359 PRKRIP1Q9H875 184 aaPredicted RBP22.27■■□□□ 1.16
LRCH4-208ENST00000490359 RC3H1Q5TC82 1133 aaKnown RBP22.26■■□□□ 1.15
LRCH4-208ENST00000490359 NLGN2Q8NFZ4 835 aa22.26■■□□□ 1.15
LRCH4-208ENST00000490359 CNTNAP4Q9C0A0 1308 aa22.26■■□□□ 1.15
LRCH4-208ENST00000490359 UBR3Q6ZT12 1888 aa22.26■■□□□ 1.15
LRCH4-208ENST00000490359 CEMIPQ8WUJ3 1361 aa22.25■■□□□ 1.15
LRCH4-208ENST00000490359 TTC5Q8N0Z6 440 aa22.25■■□□□ 1.15
LRCH4-208ENST00000490359 PNNQ9H307 717 aaKnown RBP22.25■■□□□ 1.15
LRCH4-208ENST00000490359 PLEKHF1Q96S99 279 aa22.24■■□□□ 1.15
LRCH4-208ENST00000490359 KCPQ6ZWJ8 1503 aa22.23■■□□□ 1.15
LRCH4-208ENST00000490359 GIGYF1O75420 1035 aaPredicted RBP22.23■■□□□ 1.15
LRCH4-208ENST00000490359 CRKLP46109 303 aaKnown RBP22.23■■□□□ 1.15
LRCH4-208ENST00000490359 MCM10Q7L590 875 aa22.23■■□□□ 1.15
LRCH4-208ENST00000490359 DNAJC10Q8IXB1 793 aa22.23■■□□□ 1.15
LRCH4-208ENST00000490359 MAPK8IP3Q9UPT6 1336 aa22.23■■□□□ 1.15
LRCH4-208ENST00000490359 COL5A3P25940 1745 aaPredicted RBP22.23■■□□□ 1.15
LRCH4-208ENST00000490359 HTATSF1O43719 755 aaKnown RBP22.22■■□□□ 1.15
LRCH4-208ENST00000490359 RPS6KA4O75676 772 aa22.21■■□□□ 1.15
LRCH4-208ENST00000490359 DCTN1Q14203 1278 aa22.21■■□□□ 1.15
LRCH4-208ENST00000490359 ZNF790Q6PG37 636 aa22.21■■□□□ 1.15
LRCH4-208ENST00000490359 PARP3Q9Y6F1 533 aa22.21■■□□□ 1.15
LRCH4-208ENST00000490359 TJP1Q07157 1748 aa22.2■■□□□ 1.14
LRCH4-208ENST00000490359 NFE2L2Q16236 605 aa22.2■■□□□ 1.14
LRCH4-208ENST00000490359 CCDC87Q9NVE4 849 aa22.2■■□□□ 1.14
LRCH4-208ENST00000490359 COL24A1Q17RW2 1714 aa22.2■■□□□ 1.14
LRCH4-208ENST00000490359 BTBD11A6QL63 1104 aa22.19■■□□□ 1.14
LRCH4-208ENST00000490359 WDR43Q15061 677 aaKnown RBP eCLIP22.19■■□□□ 1.14
LRCH4-208ENST00000490359 NPM2Q86SE8 214 aaKnown RBP22.19■■□□□ 1.14
LRCH4-208ENST00000490359 VSIG10Q8N0Z9 540 aa22.19■■□□□ 1.14
LRCH4-208ENST00000490359 CICQ96RK0 1608 aaPredicted RBP22.19■■□□□ 1.14
LRCH4-208ENST00000490359 SIPA1L3O60292 1781 aaPredicted RBP22.18■■□□□ 1.14
LRCH4-208ENST00000490359 MMP10P09238 476 aa22.18■■□□□ 1.14
LRCH4-208ENST00000490359 ZNF496Q96IT1 587 aaPredicted RBP22.18■■□□□ 1.14
LRCH4-208ENST00000490359 CYP19A1P11511 503 aaPredicted RBP22.17■■□□□ 1.14
LRCH4-208ENST00000490359 INTS5Q6P9B9 1019 aaKnown RBP22.17■■□□□ 1.14
LRCH4-208ENST00000490359 ARHGEF1Q92888 912 aaKnown RBP22.17■■□□□ 1.14
LRCH4-208ENST00000490359 MYH14Q7Z406 1995 aaKnown RBP22.17■■□□□ 1.14
LRCH4-208ENST00000490359 KCNQ3O43525 872 aa22.16■■□□□ 1.14
LRCH4-208ENST00000490359 ZPR1O75312 459 aa22.16■■□□□ 1.14
LRCH4-208ENST00000490359 TGFB2P61812 414 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms