RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 ADRA2BP18089 450 aa16.04■□□□□ 0.16
SEMA6C-208ENST00000489944 YY1P25490 414 aa16.04■□□□□ 0.16
SEMA6C-208ENST00000489944 ATP6V1AP38606 617 aa16.04■□□□□ 0.16
SEMA6C-208ENST00000489944 ASAP1Q9ULH1 1129 aa16.04■□□□□ 0.16
SEMA6C-208ENST00000489944 CD2APQ9Y5K6 639 aa16.03■□□□□ 0.16
SEMA6C-208ENST00000489944 KDM6AO15550 1401 aaPredicted RBP16.02■□□□□ 0.16
SEMA6C-208ENST00000489944 AEBP1Q8IUX7 1158 aa16.02■□□□□ 0.16
SEMA6C-208ENST00000489944 UBR3Q6ZT12 1888 aa16.01■□□□□ 0.15
SEMA6C-208ENST00000489944 CNTNAP4Q9C0A0 1308 aa16.01■□□□□ 0.15
SEMA6C-208ENST00000489944 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.01■□□□□ 0.15
SEMA6C-208ENST00000489944 CC2D1BQ5T0F9 858 aaKnown RBP16.01■□□□□ 0.15
SEMA6C-208ENST00000489944 CFAP53Q96M91 514 aa16.01■□□□□ 0.15
SEMA6C-208ENST00000489944 CICQ96RK0 1608 aaPredicted RBP16.01■□□□□ 0.15
SEMA6C-208ENST00000489944 LINC00116Q8NCU8 138 aa16■□□□□ 0.15
SEMA6C-208ENST00000489944 RTCBQ9Y3I0 505 aaKnown RBP16■□□□□ 0.15
SEMA6C-208ENST00000489944 GRIN3BO60391 1043 aa15.99■□□□□ 0.15
SEMA6C-208ENST00000489944 MRC1P22897 1456 aa15.98■□□□□ 0.15
SEMA6C-208ENST00000489944 SCN11AQ9UI33 1791 aa15.98■□□□□ 0.15
SEMA6C-208ENST00000489944 GNPATO15228 680 aa15.98■□□□□ 0.15
SEMA6C-208ENST00000489944 ITPK1Q13572 414 aa15.98■□□□□ 0.15
SEMA6C-208ENST00000489944 NLGN1Q8N2Q7 840 aa15.98■□□□□ 0.15
SEMA6C-208ENST00000489944 GAS2L2Q8NHY3 880 aa15.98■□□□□ 0.15
SEMA6C-208ENST00000489944 NUDCQ9Y266 331 aa15.98■□□□□ 0.15
SEMA6C-208ENST00000489944 RPS6KA4O75676 772 aa15.97■□□□□ 0.15
SEMA6C-208ENST00000489944 GPR162Q16538 588 aa15.97■□□□□ 0.15
SEMA6C-208ENST00000489944 TRAPPC3LQ5T215 181 aa15.97■□□□□ 0.15
SEMA6C-208ENST00000489944 NFATC2IPQ8NCF5 419 aa15.97■□□□□ 0.15
SEMA6C-208ENST00000489944 RBM42Q9BTD8 480 aaKnown RBP15.97■□□□□ 0.15
SEMA6C-208ENST00000489944 SLC52A2Q9HAB3 445 aa15.97■□□□□ 0.15
SEMA6C-208ENST00000489944 COL3A1P02461 1466 aaPredicted RBP15.97■□□□□ 0.15
SEMA6C-208ENST00000489944 ADAMTS7Q9UKP4 1686 aa15.96■□□□□ 0.15
SEMA6C-208ENST00000489944 VSIG10Q8N0Z9 540 aa15.96■□□□□ 0.15
SEMA6C-208ENST00000489944 CHD4Q14839 1912 aa15.96■□□□□ 0.14
SEMA6C-208ENST00000489944 COL5A3P25940 1745 aaPredicted RBP15.95■□□□□ 0.14
SEMA6C-208ENST00000489944 RNMTO43148 476 aaKnown RBP15.94■□□□□ 0.14
SEMA6C-208ENST00000489944 PHF14O94880 888 aa15.94■□□□□ 0.14
SEMA6C-208ENST00000489944 HMOX1P09601 288 aa15.93■□□□□ 0.14
SEMA6C-208ENST00000489944 MTHFSDQ2M296 383 aaKnown RBP15.93■□□□□ 0.14
SEMA6C-208ENST00000489944 SLC4A9Q96Q91 983 aa15.93■□□□□ 0.14
SEMA6C-208ENST00000489944 RFC4P35249 363 aa15.92■□□□□ 0.14
SEMA6C-208ENST00000489944 MSL1Q68DK7 614 aa15.92■□□□□ 0.14
SEMA6C-208ENST00000489944 KLHL34Q8N239 644 aa15.92■□□□□ 0.14
SEMA6C-208ENST00000489944 GNAT3A8MTJ3 354 aa15.91■□□□□ 0.14
SEMA6C-208ENST00000489944 U2SURPO15042 1029 aaKnown RBP15.91■□□□□ 0.14
SEMA6C-208ENST00000489944 PTCD1O75127 700 aaKnown RBP15.91■□□□□ 0.14
SEMA6C-208ENST00000489944 FCHSD2O94868 740 aa15.91■□□□□ 0.14
SEMA6C-208ENST00000489944 TEX13AQ9BXU3 409 aaPredicted RBP15.91■□□□□ 0.14
SEMA6C-208ENST00000489944 CRKLP46109 303 aaKnown RBP15.9■□□□□ 0.14
SEMA6C-208ENST00000489944 AMIGO3Q86WK7 504 aa15.9■□□□□ 0.14
SEMA6C-208ENST00000489944 NLGN2Q8NFZ4 835 aa15.9■□□□□ 0.14
SEMA6C-208ENST00000489944 ARHGEF1Q92888 912 aaKnown RBP15.9■□□□□ 0.14
SEMA6C-208ENST00000489944 PPP2R1AP30153 589 aa15.89■□□□□ 0.13
SEMA6C-208ENST00000489944 TGFB2P61812 414 aa15.89■□□□□ 0.13
SEMA6C-208ENST00000489944 TEFQ10587 303 aa15.89■□□□□ 0.13
SEMA6C-208ENST00000489944 LGR6Q9HBX8 967 aa15.89■□□□□ 0.13
SEMA6C-208ENST00000489944 HTATSF1O43719 755 aaKnown RBP15.88■□□□□ 0.13
SEMA6C-208ENST00000489944 TTC5Q8N0Z6 440 aa15.88■□□□□ 0.13
SEMA6C-208ENST00000489944 CCDC87Q9NVE4 849 aa15.88■□□□□ 0.13
SEMA6C-208ENST00000489944 CEMIPQ8WUJ3 1361 aa15.87■□□□□ 0.13
SEMA6C-208ENST00000489944 MMP10P09238 476 aa15.87■□□□□ 0.13
SEMA6C-208ENST00000489944 GYS1P13807 737 aa15.87■□□□□ 0.13
SEMA6C-208ENST00000489944 RSPH6AQ9H0K4 717 aa15.87■□□□□ 0.13
SEMA6C-208ENST00000489944 PNNQ9H307 717 aaKnown RBP15.87■□□□□ 0.13
SEMA6C-208ENST00000489944 TJP1Q07157 1748 aa15.87■□□□□ 0.13
SEMA6C-208ENST00000489944 UTRNP46939 3433 aa15.87■□□□□ 0.13
SEMA6C-208ENST00000489944 STARD3NLO95772 234 aa15.86■□□□□ 0.13
SEMA6C-208ENST00000489944 CYP19A1P11511 503 aaPredicted RBP15.86■□□□□ 0.13
SEMA6C-208ENST00000489944 ZNF784Q8NCA9 323 aaPredicted RBP15.86■□□□□ 0.13
SEMA6C-208ENST00000489944 PARP3Q9Y6F1 533 aa15.86■□□□□ 0.13
SEMA6C-208ENST00000489944 KIF13BQ9NQT8 1826 aa15.86■□□□□ 0.13
SEMA6C-208ENST00000489944 USP42Q9H9J4 1324 aaKnown RBP15.86■□□□□ 0.13
SEMA6C-208ENST00000489944 MYH14Q7Z406 1995 aaKnown RBP15.86■□□□□ 0.13
SEMA6C-208ENST00000489944 VIRMAQ69YN4 1812 aaKnown RBP15.85■□□□□ 0.13
SEMA6C-208ENST00000489944 KCPQ6ZWJ8 1503 aa15.85■□□□□ 0.13
SEMA6C-208ENST00000489944 NEFMP07197 916 aa15.85■□□□□ 0.13
SEMA6C-208ENST00000489944 INTS5Q6P9B9 1019 aaKnown RBP15.85■□□□□ 0.13
SEMA6C-208ENST00000489944 UBR2Q8IWV8 1755 aa15.85■□□□□ 0.13
SEMA6C-208ENST00000489944 A0A087WZG4 1122 aa15.84■□□□□ 0.13
SEMA6C-208ENST00000489944 ZPR1O75312 459 aa15.84■□□□□ 0.13
SEMA6C-208ENST00000489944 U2AF1L5P0DN76 240 aaPredicted RBP15.84■□□□□ 0.13
SEMA6C-208ENST00000489944 PRKAR2BP31323 418 aa15.84■□□□□ 0.13
SEMA6C-208ENST00000489944 U2AF1Q01081 240 aaKnown RBP eCLIP15.84■□□□□ 0.13
SEMA6C-208ENST00000489944 ZNF790Q6PG37 636 aa15.84■□□□□ 0.13
SEMA6C-208ENST00000489944 PELP1Q8IZL8 1130 aaKnown RBP15.84■□□□□ 0.13
SEMA6C-208ENST00000489944 RTF1Q92541 710 aaKnown RBP15.84■□□□□ 0.13
SEMA6C-208ENST00000489944 SOS1Q07889 1333 aaPredicted RBP15.84■□□□□ 0.13
SEMA6C-208ENST00000489944 C10orf71Q711Q0 1435 aa15.84■□□□□ 0.13
SEMA6C-208ENST00000489944 C4AP0C0L4 1744 aa15.83■□□□□ 0.13
SEMA6C-208ENST00000489944 YBX3P16989 372 aaKnown RBP eCLIP15.83■□□□□ 0.12
SEMA6C-208ENST00000489944 DNAJC10Q8IXB1 793 aa15.83■□□□□ 0.12
SEMA6C-208ENST00000489944 IL17REQ8NFR9 667 aa15.83■□□□□ 0.12
SEMA6C-208ENST00000489944 FMNL2Q96PY5 1086 aa15.82■□□□□ 0.12
SEMA6C-208ENST00000489944 NARFQ9UHQ1 456 aa15.82■□□□□ 0.12
SEMA6C-208ENST00000489944 SLC39A6Q13433 755 aa15.81■□□□□ 0.12
SEMA6C-208ENST00000489944 RALBP1Q15311 655 aa15.81■□□□□ 0.12
SEMA6C-208ENST00000489944 HEG1Q9ULI3 1381 aa15.81■□□□□ 0.12
SEMA6C-208ENST00000489944 SIPA1L3O60292 1781 aaPredicted RBP15.8■□□□□ 0.12
SEMA6C-208ENST00000489944 GOLGB1Q14789 3259 aaKnown RBP15.8■□□□□ 0.12
SEMA6C-208ENST00000489944 COL15A1P39059 1388 aa15.8■□□□□ 0.12
SEMA6C-208ENST00000489944 RGL2O15211 777 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms