RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 DCAF5Q96JK2 942 aa26.5■■□□□ 1.83
TNFRSF1B-202ENST00000489921 AK7Q96M32 723 aa26.5■■□□□ 1.83
TNFRSF1B-202ENST00000489921 SLC4A9Q96Q91 983 aa26.5■■□□□ 1.83
TNFRSF1B-202ENST00000489921 ZNF831Q5JPB2 1677 aa26.5■■□□□ 1.83
TNFRSF1B-202ENST00000489921 AMOTQ4VCS5 1084 aa26.49■■□□□ 1.83
TNFRSF1B-202ENST00000489921 SULT6B1Q6IMI4 303 aa26.49■■□□□ 1.83
TNFRSF1B-202ENST00000489921 ZNF530Q6P9A1 599 aaPredicted RBP26.49■■□□□ 1.83
TNFRSF1B-202ENST00000489921 ATP6V1AP38606 617 aa26.48■■□□□ 1.83
TNFRSF1B-202ENST00000489921 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.47■■□□□ 1.83
TNFRSF1B-202ENST00000489921 HSP90AB1P08238 724 aaKnown RBP26.47■■□□□ 1.83
TNFRSF1B-202ENST00000489921 PHF14O94880 888 aa26.46■■□□□ 1.83
TNFRSF1B-202ENST00000489921 SSFA2P28290 1259 aa26.46■■□□□ 1.83
TNFRSF1B-202ENST00000489921 MTHFSP49914 203 aa26.46■■□□□ 1.83
TNFRSF1B-202ENST00000489921 COL5A3P25940 1745 aaPredicted RBP26.45■■□□□ 1.83
TNFRSF1B-202ENST00000489921 GPR162Q16538 588 aa26.45■■□□□ 1.82
TNFRSF1B-202ENST00000489921 SCN11AQ9UI33 1791 aa26.43■■□□□ 1.82
TNFRSF1B-202ENST00000489921 ZNF784Q8NCA9 323 aaPredicted RBP26.43■■□□□ 1.82
TNFRSF1B-202ENST00000489921 CC2D1BQ5T0F9 858 aaKnown RBP26.42■■□□□ 1.82
TNFRSF1B-202ENST00000489921 GNPATO15228 680 aa26.41■■□□□ 1.82
TNFRSF1B-202ENST00000489921 YBX3P16989 372 aaKnown RBP eCLIP26.41■■□□□ 1.82
TNFRSF1B-202ENST00000489921 CABP4P57796 275 aa26.41■■□□□ 1.82
TNFRSF1B-202ENST00000489921 MYH14Q7Z406 1995 aaKnown RBP26.4■■□□□ 1.82
TNFRSF1B-202ENST00000489921 CD2APQ9Y5K6 639 aa26.4■■□□□ 1.82
TNFRSF1B-202ENST00000489921 C1orf141Q5JVX7 400 aa26.39■■□□□ 1.82
TNFRSF1B-202ENST00000489921 NFATC2IPQ8NCF5 419 aa26.39■■□□□ 1.82
TNFRSF1B-202ENST00000489921 RBM42Q9BTD8 480 aaKnown RBP26.39■■□□□ 1.82
TNFRSF1B-202ENST00000489921 VIRMAQ69YN4 1812 aaKnown RBP26.39■■□□□ 1.81
TNFRSF1B-202ENST00000489921 NPC1L1Q9UHC9 1359 aa26.38■■□□□ 1.81
TNFRSF1B-202ENST00000489921 PELP1Q8IZL8 1130 aaKnown RBP26.37■■□□□ 1.81
TNFRSF1B-202ENST00000489921 HMOX1P09601 288 aa26.36■■□□□ 1.81
TNFRSF1B-202ENST00000489921 RC3H1Q5TC82 1133 aaKnown RBP26.36■■□□□ 1.81
TNFRSF1B-202ENST00000489921 COL3A1P02461 1466 aaPredicted RBP26.36■■□□□ 1.81
TNFRSF1B-202ENST00000489921 AKAP4Q5JQC9 854 aa26.35■■□□□ 1.81
TNFRSF1B-202ENST00000489921 LGR6Q9HBX8 967 aa26.35■■□□□ 1.81
TNFRSF1B-202ENST00000489921 CICQ96RK0 1608 aaPredicted RBP26.35■■□□□ 1.81
TNFRSF1B-202ENST00000489921 TJP1Q07157 1748 aa26.34■■□□□ 1.81
TNFRSF1B-202ENST00000489921 ADAMTS7Q9UKP4 1686 aa26.34■■□□□ 1.81
TNFRSF1B-202ENST00000489921 CNTNAP4Q9C0A0 1308 aa26.34■■□□□ 1.81
TNFRSF1B-202ENST00000489921 DIAPH1O60610 1272 aaKnown RBP26.33■■□□□ 1.81
TNFRSF1B-202ENST00000489921 RTCBQ9Y3I0 505 aaKnown RBP26.33■■□□□ 1.81
TNFRSF1B-202ENST00000489921 PTCD1O75127 700 aaKnown RBP26.32■■□□□ 1.8
TNFRSF1B-202ENST00000489921 TRAPPC3LQ5T215 181 aa26.32■■□□□ 1.8
TNFRSF1B-202ENST00000489921 ARHGEF1Q92888 912 aaKnown RBP26.32■■□□□ 1.8
TNFRSF1B-202ENST00000489921 C4AP0C0L4 1744 aa26.31■■□□□ 1.8
TNFRSF1B-202ENST00000489921 MRC1P22897 1456 aa26.3■■□□□ 1.8
TNFRSF1B-202ENST00000489921 RPS6KA4O75676 772 aa26.3■■□□□ 1.8
TNFRSF1B-202ENST00000489921 MTHFSDQ2M296 383 aaKnown RBP26.3■■□□□ 1.8
TNFRSF1B-202ENST00000489921 SLC52A2Q9HAB3 445 aa26.3■■□□□ 1.8
TNFRSF1B-202ENST00000489921 KIF13BQ9NQT8 1826 aa26.3■■□□□ 1.8
TNFRSF1B-202ENST00000489921 RNMTO43148 476 aaKnown RBP26.29■■□□□ 1.8
TNFRSF1B-202ENST00000489921 GRIN3BO60391 1043 aa26.29■■□□□ 1.8
TNFRSF1B-202ENST00000489921 ADRA2BP18089 450 aa26.28■■□□□ 1.8
TNFRSF1B-202ENST00000489921 CNGB1Q14028 1251 aaPredicted RBP26.28■■□□□ 1.8
TNFRSF1B-202ENST00000489921 KIAA1551Q9HCM1 1747 aa26.28■■□□□ 1.8
TNFRSF1B-202ENST00000489921 MMP10P09238 476 aa26.27■■□□□ 1.8
TNFRSF1B-202ENST00000489921 GYS1P13807 737 aa26.26■■□□□ 1.79
TNFRSF1B-202ENST00000489921 CRKLP46109 303 aaKnown RBP26.26■■□□□ 1.79
TNFRSF1B-202ENST00000489921 INTS5Q6P9B9 1019 aaKnown RBP26.24■■□□□ 1.79
TNFRSF1B-202ENST00000489921 NLGN1Q8N2Q7 840 aa26.24■■□□□ 1.79
TNFRSF1B-202ENST00000489921 KCPQ6ZWJ8 1503 aa26.24■■□□□ 1.79
TNFRSF1B-202ENST00000489921 SLC39A6Q13433 755 aa26.23■■□□□ 1.79
TNFRSF1B-202ENST00000489921 RFC4P35249 363 aa26.22■■□□□ 1.79
TNFRSF1B-202ENST00000489921 N4BP2Q86UW6 1770 aaPredicted RBP26.22■■□□□ 1.79
TNFRSF1B-202ENST00000489921 UBR2Q8IWV8 1755 aa26.2■■□□□ 1.79
TNFRSF1B-202ENST00000489921 DNAJC10Q8IXB1 793 aa26.2■■□□□ 1.78
TNFRSF1B-202ENST00000489921 WWC3Q9ULE0 1092 aa26.2■■□□□ 1.78
TNFRSF1B-202ENST00000489921 PXDNLA1KZ92 1463 aa26.19■■□□□ 1.78
TNFRSF1B-202ENST00000489921 SRP68Q9UHB9 627 aaKnown RBP26.19■■□□□ 1.78
TNFRSF1B-202ENST00000489921 U2SURPO15042 1029 aaKnown RBP26.18■■□□□ 1.78
TNFRSF1B-202ENST00000489921 C10orf71Q711Q0 1435 aa26.18■■□□□ 1.78
TNFRSF1B-202ENST00000489921 SIPA1L3O60292 1781 aaPredicted RBP26.18■■□□□ 1.78
TNFRSF1B-202ENST00000489921 CYP19A1P11511 503 aaPredicted RBP26.17■■□□□ 1.78
TNFRSF1B-202ENST00000489921 USP42Q9H9J4 1324 aaKnown RBP26.16■■□□□ 1.78
TNFRSF1B-202ENST00000489921 IL17REQ8NFR9 667 aa26.16■■□□□ 1.78
TNFRSF1B-202ENST00000489921 FKBP8Q14318 412 aa26.15■■□□□ 1.78
TNFRSF1B-202ENST00000489921 CCDC87Q9NVE4 849 aa26.15■■□□□ 1.78
TNFRSF1B-202ENST00000489921 BRCA1P38398 1863 aaKnown RBP26.15■■□□□ 1.78
TNFRSF1B-202ENST00000489921 TGFB2P61812 414 aa26.14■■□□□ 1.78
TNFRSF1B-202ENST00000489921 PHACTR3Q96KR7 559 aa26.14■■□□□ 1.78
TNFRSF1B-202ENST00000489921 SOS1Q07889 1333 aaPredicted RBP26.13■■□□□ 1.77
TNFRSF1B-202ENST00000489921 ADCY9O60503 1353 aa26.12■■□□□ 1.77
TNFRSF1B-202ENST00000489921 A0A0G2JLW4 131 aa26.12■■□□□ 1.77
TNFRSF1B-202ENST00000489921 PPP2R1AP30153 589 aa26.12■■□□□ 1.77
TNFRSF1B-202ENST00000489921 DDR1Q08345 913 aa26.12■■□□□ 1.77
TNFRSF1B-202ENST00000489921 VSIG10Q8N0Z9 540 aa26.12■■□□□ 1.77
TNFRSF1B-202ENST00000489921 RSPH6AQ9H0K4 717 aa26.12■■□□□ 1.77
TNFRSF1B-202ENST00000489921 GNAT3A8MTJ3 354 aa26.11■■□□□ 1.77
TNFRSF1B-202ENST00000489921 C1QTNF8P60827 252 aa26.11■■□□□ 1.77
TNFRSF1B-202ENST00000489921 PARP3Q9Y6F1 533 aa26.11■■□□□ 1.77
TNFRSF1B-202ENST00000489921 KCNA3P22001 575 aa26.1■■□□□ 1.77
TNFRSF1B-202ENST00000489921 TM4SF1P30408 202 aa26.1■■□□□ 1.77
TNFRSF1B-202ENST00000489921 GAS2L2Q8NHY3 880 aa26.1■■□□□ 1.77
TNFRSF1B-202ENST00000489921 ATP10DQ9P241 1426 aa26.1■■□□□ 1.77
TNFRSF1B-202ENST00000489921 ZBTB1Q9Y2K1 713 aa26.09■■□□□ 1.77
TNFRSF1B-202ENST00000489921 CEMIPQ8WUJ3 1361 aa26.08■■□□□ 1.77
TNFRSF1B-202ENST00000489921 DPEP1P16444 411 aa26.08■■□□□ 1.77
TNFRSF1B-202ENST00000489921 PRKAR2BP31323 418 aa26.08■■□□□ 1.77
TNFRSF1B-202ENST00000489921 USPL1Q5W0Q7 1092 aa26.08■■□□□ 1.77
TNFRSF1B-202ENST00000489921 CFAP53Q96M91 514 aa26.07■■□□□ 1.76
TNFRSF1B-202ENST00000489921 POLRMTO00411 1230 aaKnown RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms