RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 RAPGEF4Q8WZA2 1011 aa21.01■□□□□ 0.95
SDHAF3-204ENST00000489852 PCDH11XQ9BZA7 1347 aa21.01■□□□□ 0.95
SDHAF3-204ENST00000489852 PCDH11YQ9BZA8 1340 aa21.01■□□□□ 0.95
SDHAF3-204ENST00000489852 HOXC9P31274 260 aa21■□□□□ 0.95
SDHAF3-204ENST00000489852 LBX1P52954 281 aa21■□□□□ 0.95
SDHAF3-204ENST00000489852 PARP3Q9Y6F1 533 aa21■□□□□ 0.95
SDHAF3-204ENST00000489852 RAB3GAP2Q9H2M9 1393 aa20.99■□□□□ 0.95
SDHAF3-204ENST00000489852 C4AP0C0L4 1744 aa20.99■□□□□ 0.95
SDHAF3-204ENST00000489852 AMPHP49418 695 aa20.99■□□□□ 0.95
SDHAF3-204ENST00000489852 RGS19P49795 217 aa20.99■□□□□ 0.95
SDHAF3-204ENST00000489852 TATP17735 454 aaPredicted RBP20.98■□□□□ 0.95
SDHAF3-204ENST00000489852 TRAPPC3LQ5T215 181 aa20.98■□□□□ 0.95
SDHAF3-204ENST00000489852 PIGBQ92521 554 aa20.98■□□□□ 0.95
SDHAF3-204ENST00000489852 ITGB4P16144 1822 aa20.98■□□□□ 0.95
SDHAF3-204ENST00000489852 MAP2P11137 1827 aaKnown RBP20.97■□□□□ 0.95
SDHAF3-204ENST00000489852 CCDC85CA6NKD9 419 aa20.97■□□□□ 0.95
SDHAF3-204ENST00000489852 ITPK1Q13572 414 aa20.97■□□□□ 0.95
SDHAF3-204ENST00000489852 NBPF6Q5VWK0 638 aa20.97■□□□□ 0.95
SDHAF3-204ENST00000489852 USHBP1Q8N6Y0 703 aa20.97■□□□□ 0.95
SDHAF3-204ENST00000489852 NBPF4Q96M43 638 aa20.97■□□□□ 0.95
SDHAF3-204ENST00000489852 CNTNAP1P78357 1384 aa20.97■□□□□ 0.95
SDHAF3-204ENST00000489852 MAP3K19Q56UN5 1328 aa20.96■□□□□ 0.95
SDHAF3-204ENST00000489852 ATP6V1AP38606 617 aa20.95■□□□□ 0.94
SDHAF3-204ENST00000489852 RASSF7Q02833 373 aa20.95■□□□□ 0.94
SDHAF3-204ENST00000489852 HDGFL2Q7Z4V5 671 aaPredicted RBP20.95■□□□□ 0.94
SDHAF3-204ENST00000489852 RTCBQ9Y3I0 505 aaKnown RBP20.95■□□□□ 0.94
SDHAF3-204ENST00000489852 CD163L1Q9NR16 1453 aa20.94■□□□□ 0.94
SDHAF3-204ENST00000489852 EDC4Q6P2E9 1401 aaKnown RBP20.94■□□□□ 0.94
SDHAF3-204ENST00000489852 CYP27B1O15528 508 aa20.93■□□□□ 0.94
SDHAF3-204ENST00000489852 LMNB1P20700 586 aa20.93■□□□□ 0.94
SDHAF3-204ENST00000489852 WBP1LQ9NX94 342 aa20.93■□□□□ 0.94
SDHAF3-204ENST00000489852 KDM6AO15550 1401 aaPredicted RBP20.93■□□□□ 0.94
SDHAF3-204ENST00000489852 POTECB2RU33 542 aa20.92■□□□□ 0.94
SDHAF3-204ENST00000489852 GYS1P13807 737 aa20.92■□□□□ 0.94
SDHAF3-204ENST00000489852 TMC1Q8TDI8 760 aa20.92■□□□□ 0.94
SDHAF3-204ENST00000489852 CHRNA5P30532 468 aa20.91■□□□□ 0.94
SDHAF3-204ENST00000489852 CHADLQ6NUI6 762 aa20.91■□□□□ 0.94
SDHAF3-204ENST00000489852 ARHGEF1Q92888 912 aaKnown RBP20.91■□□□□ 0.94
SDHAF3-204ENST00000489852 FBLN1P23142 703 aa20.9■□□□□ 0.94
SDHAF3-204ENST00000489852 RFC4P35249 363 aa20.9■□□□□ 0.94
SDHAF3-204ENST00000489852 VEGFBP49765 207 aa20.9■□□□□ 0.94
SDHAF3-204ENST00000489852 HSPA8P11142 646 aaKnown RBP20.89■□□□□ 0.93
SDHAF3-204ENST00000489852 ASAP1Q9ULH1 1129 aa20.89■□□□□ 0.93
SDHAF3-204ENST00000489852 ADRA2BP18089 450 aa20.88■□□□□ 0.93
SDHAF3-204ENST00000489852 DPY19L2Q6NUT2 758 aa20.88■□□□□ 0.93
SDHAF3-204ENST00000489852 SLC12A5Q9H2X9 1139 aa20.87■□□□□ 0.93
SDHAF3-204ENST00000489852 TMOD3Q9NYL9 352 aa20.87■□□□□ 0.93
SDHAF3-204ENST00000489852 COG3Q96JB2 828 aa20.86■□□□□ 0.93
SDHAF3-204ENST00000489852 TERF2IPQ9NYB0 399 aa20.86■□□□□ 0.93
SDHAF3-204ENST00000489852 SMG6Q86US8 1419 aaKnown RBP20.86■□□□□ 0.93
SDHAF3-204ENST00000489852 TIAM2Q8IVF5 1701 aa20.85■□□□□ 0.93
SDHAF3-204ENST00000489852 NKX1-1Q15270 411 aaPredicted RBP20.84■□□□□ 0.93
SDHAF3-204ENST00000489852 RTL1A6NKG5 1358 aa20.84■□□□□ 0.93
SDHAF3-204ENST00000489852 VIRMAQ69YN4 1812 aaKnown RBP20.83■□□□□ 0.93
SDHAF3-204ENST00000489852 A0A1W2PP64 1363 aa20.83■□□□□ 0.92
SDHAF3-204ENST00000489852 POTEIP0CG38 1075 aa20.82■□□□□ 0.92
SDHAF3-204ENST00000489852 POTEJP0CG39 1038 aa20.82■□□□□ 0.92
SDHAF3-204ENST00000489852 RC3H1Q5TC82 1133 aaKnown RBP20.82■□□□□ 0.92
SDHAF3-204ENST00000489852 CFAP44Q96MT7 982 aa20.82■□□□□ 0.92
SDHAF3-204ENST00000489852 CCDC88AQ3V6T2 1871 aa20.81■□□□□ 0.92
SDHAF3-204ENST00000489852 ATG3Q9NT62 314 aa20.81■□□□□ 0.92
SDHAF3-204ENST00000489852 PASKQ96RG2 1323 aa20.8■□□□□ 0.92
SDHAF3-204ENST00000489852 TMEM88BA6NKF7 163 aa20.8■□□□□ 0.92
SDHAF3-204ENST00000489852 RPS6KA4O75676 772 aa20.8■□□□□ 0.92
SDHAF3-204ENST00000489852 MAP2K1Q02750 393 aaPredicted RBP20.8■□□□□ 0.92
SDHAF3-204ENST00000489852 DDR1Q08345 913 aa20.8■□□□□ 0.92
SDHAF3-204ENST00000489852 RRS1Q15050 365 aaKnown RBP20.8■□□□□ 0.92
SDHAF3-204ENST00000489852 FKBP8Q14318 412 aa20.78■□□□□ 0.92
SDHAF3-204ENST00000489852 TNRC18O15417 2968 aaPredicted RBP20.77■□□□□ 0.92
SDHAF3-204ENST00000489852 CNTNAP4Q9C0A0 1308 aa20.77■□□□□ 0.91
SDHAF3-204ENST00000489852 ROCK2O75116 1388 aaKnown RBP20.76■□□□□ 0.91
SDHAF3-204ENST00000489852 KDRP35968 1356 aa20.76■□□□□ 0.91
SDHAF3-204ENST00000489852 SLC4A9Q96Q91 983 aa20.76■□□□□ 0.91
SDHAF3-204ENST00000489852 RBM42Q9BTD8 480 aaKnown RBP20.76■□□□□ 0.91
SDHAF3-204ENST00000489852 SRP68Q9UHB9 627 aaKnown RBP20.76■□□□□ 0.91
SDHAF3-204ENST00000489852 SPG7Q9UQ90 795 aa20.76■□□□□ 0.91
SDHAF3-204ENST00000489852 NFKBIEO00221 500 aa20.75■□□□□ 0.91
SDHAF3-204ENST00000489852 DEFB115Q30KQ5 88 aa20.74■□□□□ 0.91
SDHAF3-204ENST00000489852 ERFEQ4G0M1 354 aa20.74■□□□□ 0.91
SDHAF3-204ENST00000489852 HSP90AB2PQ58FF8 381 aa20.74■□□□□ 0.91
SDHAF3-204ENST00000489852 TTLL6Q8N841 843 aa20.74■□□□□ 0.91
SDHAF3-204ENST00000489852 RASSF10A6NK89 507 aa20.73■□□□□ 0.91
SDHAF3-204ENST00000489852 POLRMTO00411 1230 aaKnown RBP20.73■□□□□ 0.91
SDHAF3-204ENST00000489852 LDHDQ86WU2 507 aa20.73■□□□□ 0.91
SDHAF3-204ENST00000489852 WDR33Q9C0J8 1336 aaKnown RBP20.73■□□□□ 0.91
SDHAF3-204ENST00000489852 INSRP06213 1382 aa20.72■□□□□ 0.91
SDHAF3-204ENST00000489852 COL5A3P25940 1745 aaPredicted RBP20.72■□□□□ 0.91
SDHAF3-204ENST00000489852 USP42Q9H9J4 1324 aaKnown RBP20.72■□□□□ 0.91
SDHAF3-204ENST00000489852 ITGBL1O95965 494 aaPredicted RBP20.71■□□□□ 0.91
SDHAF3-204ENST00000489852 ZNF831Q5JPB2 1677 aa20.7■□□□□ 0.91
SDHAF3-204ENST00000489852 DDNO94850 711 aaPredicted RBP20.7■□□□□ 0.9
SDHAF3-204ENST00000489852 TM4SF1P30408 202 aa20.7■□□□□ 0.9
SDHAF3-204ENST00000489852 BEGAINQ9BUH8 593 aa20.7■□□□□ 0.9
SDHAF3-204ENST00000489852 PDE4DIPQ5VU43 2346 aa20.69■□□□□ 0.9
SDHAF3-204ENST00000489852 MYH14Q7Z406 1995 aaKnown RBP20.69■□□□□ 0.9
SDHAF3-204ENST00000489852 IQCA1LA6NCM1 817 aa20.68■□□□□ 0.9
SDHAF3-204ENST00000489852 IFNL2Q8IZJ0 200 aa20.68■□□□□ 0.9
SDHAF3-204ENST00000489852 L3MBTL2Q969R5 705 aa20.68■□□□□ 0.9
SDHAF3-204ENST00000489852 DICER1Q9UPY3 1922 aaKnown RBP20.67■□□□□ 0.9
SDHAF3-204ENST00000489852 PHKG2P15735 406 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms