RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 SPRYD3Q8NCJ5 442 aa7.97□□□□□ -1.13
CNOT9-207ENST00000489687 ZCRB1Q8TBF4 217 aaKnown RBP7.97□□□□□ -1.13
CNOT9-207ENST00000489687 RAPGEF4Q8WZA2 1011 aa7.97□□□□□ -1.13
CNOT9-207ENST00000489687 QSER1Q2KHR3 1735 aa7.96□□□□□ -1.14
CNOT9-207ENST00000489687 CGNL1Q0VF96 1302 aa7.96□□□□□ -1.14
CNOT9-207ENST00000489687 TAF1LQ8IZX4 1826 aa7.96□□□□□ -1.14
CNOT9-207ENST00000489687 NCAPD2Q15021 1401 aa7.95□□□□□ -1.14
CNOT9-207ENST00000489687 RIOK3O14730 519 aaKnown RBP7.95□□□□□ -1.14
CNOT9-207ENST00000489687 CYP27B1O15528 508 aa7.95□□□□□ -1.14
CNOT9-207ENST00000489687 TATP17735 454 aaPredicted RBP7.95□□□□□ -1.14
CNOT9-207ENST00000489687 NUBP1P53384 320 aa7.95□□□□□ -1.14
CNOT9-207ENST00000489687 EIF4G2P78344 907 aaKnown RBP eCLIP7.95□□□□□ -1.14
CNOT9-207ENST00000489687 FHDC1Q9C0D6 1143 aaPredicted RBP7.95□□□□□ -1.14
CNOT9-207ENST00000489687 CREBZFQ9NS37 354 aa7.95□□□□□ -1.14
CNOT9-207ENST00000489687 PNPLA7Q6ZV29 1317 aa7.95□□□□□ -1.14
CNOT9-207ENST00000489687 PCDH11XQ9BZA7 1347 aa7.95□□□□□ -1.14
CNOT9-207ENST00000489687 PCDH11YQ9BZA8 1340 aa7.95□□□□□ -1.14
CNOT9-207ENST00000489687 DIEXFQ68CQ4 756 aaKnown RBP7.94□□□□□ -1.14
CNOT9-207ENST00000489687 MSL1Q68DK7 614 aa7.94□□□□□ -1.14
CNOT9-207ENST00000489687 SMIM5Q71RC9 77 aa7.94□□□□□ -1.14
CNOT9-207ENST00000489687 HS6ST3Q8IZP7 471 aa7.94□□□□□ -1.14
CNOT9-207ENST00000489687 SGIP1Q9BQI5 828 aa7.94□□□□□ -1.14
CNOT9-207ENST00000489687 MTFR1LQ9H019 292 aa7.94□□□□□ -1.14
CNOT9-207ENST00000489687 PANK3Q9H999 370 aa7.94□□□□□ -1.14
CNOT9-207ENST00000489687 CCNL1Q9UK58 526 aaPredicted RBP7.94□□□□□ -1.14
CNOT9-207ENST00000489687 TIMELESSQ9UNS1 1208 aa7.94□□□□□ -1.14
CNOT9-207ENST00000489687 PALLDQ8WX93 1383 aa7.94□□□□□ -1.14
CNOT9-207ENST00000489687 C4BP0C0L5 1744 aa7.93□□□□□ -1.14
CNOT9-207ENST00000489687 PITPNM1O00562 1244 aa7.93□□□□□ -1.14
CNOT9-207ENST00000489687 EIF4A2Q14240 407 aaKnown RBP7.93□□□□□ -1.14
CNOT9-207ENST00000489687 MPRIPQ6WCQ1 1025 aa7.93□□□□□ -1.14
CNOT9-207ENST00000489687 AMIGO3Q86WK7 504 aa7.93□□□□□ -1.14
CNOT9-207ENST00000489687 EYA1Q99502 592 aa7.93□□□□□ -1.14
CNOT9-207ENST00000489687 TFCP2L1Q9NZI6 479 aa7.93□□□□□ -1.14
CNOT9-207ENST00000489687 POLKQ9UBT6 870 aa7.93□□□□□ -1.14
CNOT9-207ENST00000489687 KIF24Q5T7B8 1368 aa7.93□□□□□ -1.14
CNOT9-207ENST00000489687 UBR3Q6ZT12 1888 aa7.92□□□□□ -1.14
CNOT9-207ENST00000489687 RGL2O15211 777 aa7.92□□□□□ -1.14
CNOT9-207ENST00000489687 CNGB1Q14028 1251 aaPredicted RBP7.92□□□□□ -1.14
CNOT9-207ENST00000489687 AEBP1Q8IUX7 1158 aa7.92□□□□□ -1.14
CNOT9-207ENST00000489687 UBE2Q2Q8WVN8 375 aa7.92□□□□□ -1.14
CNOT9-207ENST00000489687 COL24A1Q17RW2 1714 aa7.92□□□□□ -1.14
CNOT9-207ENST00000489687 YY1P25490 414 aa7.91□□□□□ -1.14
CNOT9-207ENST00000489687 SLC27A3Q5K4L6 730 aa7.91□□□□□ -1.14
CNOT9-207ENST00000489687 ARXQ96QS3 562 aa7.91□□□□□ -1.14
CNOT9-207ENST00000489687 KIF7Q2M1P5 1343 aa7.91□□□□□ -1.14
CNOT9-207ENST00000489687 WASHC2AQ641Q2 1341 aa7.91□□□□□ -1.14
CNOT9-207ENST00000489687 CEP350Q5VT06 3117 aa7.91□□□□□ -1.14
CNOT9-207ENST00000489687 KDM6AO15550 1401 aaPredicted RBP7.9□□□□□ -1.14
CNOT9-207ENST00000489687 PHF14O94880 888 aa7.9□□□□□ -1.14
CNOT9-207ENST00000489687 ZNF467Q7Z7K2 595 aaPredicted RBP7.9□□□□□ -1.14
CNOT9-207ENST00000489687 NLGN2Q8NFZ4 835 aa7.9□□□□□ -1.14
CNOT9-207ENST00000489687 PIGBQ92521 554 aa7.9□□□□□ -1.14
CNOT9-207ENST00000489687 SYT17Q9BSW7 474 aa7.9□□□□□ -1.14
CNOT9-207ENST00000489687 IGSF1Q8N6C5 1336 aa7.89□□□□□ -1.15
CNOT9-207ENST00000489687 PAXIP1Q6ZW49 1069 aaPredicted RBP7.89□□□□□ -1.15
CNOT9-207ENST00000489687 MORC1Q86VD1 984 aa7.89□□□□□ -1.15
CNOT9-207ENST00000489687 COL23A1Q86Y22 540 aaPredicted RBP7.89□□□□□ -1.15
CNOT9-207ENST00000489687 TSHZ2Q9NRE2 1034 aa7.89□□□□□ -1.15
CNOT9-207ENST00000489687 WWC3Q9ULE0 1092 aa7.89□□□□□ -1.15
CNOT9-207ENST00000489687 CHD4Q14839 1912 aa7.89□□□□□ -1.15
CNOT9-207ENST00000489687 VIRMAQ69YN4 1812 aaKnown RBP7.88□□□□□ -1.15
CNOT9-207ENST00000489687 PHKG2P15735 406 aa7.88□□□□□ -1.15
CNOT9-207ENST00000489687 LINC00116Q8NCU8 138 aa7.88□□□□□ -1.15
CNOT9-207ENST00000489687 TMOD3Q9NYL9 352 aa7.88□□□□□ -1.15
CNOT9-207ENST00000489687 ASAP1Q9ULH1 1129 aa7.88□□□□□ -1.15
CNOT9-207ENST00000489687 SPG7Q9UQ90 795 aa7.88□□□□□ -1.15
CNOT9-207ENST00000489687 COL5A3P25940 1745 aaPredicted RBP7.88□□□□□ -1.15
CNOT9-207ENST00000489687 KDRP35968 1356 aa7.87□□□□□ -1.15
CNOT9-207ENST00000489687 C4AP0C0L4 1744 aa7.87□□□□□ -1.15
CNOT9-207ENST00000489687 POLD1P28340 1107 aa7.87□□□□□ -1.15
CNOT9-207ENST00000489687 ITPK1Q13572 414 aa7.87□□□□□ -1.15
CNOT9-207ENST00000489687 CC2D1BQ5T0F9 858 aaKnown RBP7.87□□□□□ -1.15
CNOT9-207ENST00000489687 ZNF530Q6P9A1 599 aaPredicted RBP7.87□□□□□ -1.15
CNOT9-207ENST00000489687 AK7Q96M32 723 aa7.87□□□□□ -1.15
CNOT9-207ENST00000489687 KNSTRNQ9Y448 316 aa7.87□□□□□ -1.15
CNOT9-207ENST00000489687 TJP1Q07157 1748 aa7.86□□□□□ -1.15
CNOT9-207ENST00000489687 MAP3K5Q99683 1374 aa7.86□□□□□ -1.15
CNOT9-207ENST00000489687 MYH14Q7Z406 1995 aaKnown RBP7.86□□□□□ -1.15
CNOT9-207ENST00000489687 LOC102724428A0A0B4J2F2 783 aa7.86□□□□□ -1.15
CNOT9-207ENST00000489687 MNX1P50219 401 aaPredicted RBP7.86□□□□□ -1.15
CNOT9-207ENST00000489687 SIK1P57059 783 aa7.86□□□□□ -1.15
CNOT9-207ENST00000489687 CFAP44Q96MT7 982 aa7.86□□□□□ -1.15
CNOT9-207ENST00000489687 SCN11AQ9UI33 1791 aa7.86□□□□□ -1.15
CNOT9-207ENST00000489687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.85□□□□□ -1.15
CNOT9-207ENST00000489687 GNPATO15228 680 aa7.85□□□□□ -1.15
CNOT9-207ENST00000489687 HMOX1P09601 288 aa7.85□□□□□ -1.15
CNOT9-207ENST00000489687 YBX3P16989 372 aaKnown RBP eCLIP7.85□□□□□ -1.15
CNOT9-207ENST00000489687 NKX1-1Q15270 411 aaPredicted RBP7.85□□□□□ -1.15
CNOT9-207ENST00000489687 GPR162Q16538 588 aa7.85□□□□□ -1.15
CNOT9-207ENST00000489687 SULT6B1Q6IMI4 303 aa7.85□□□□□ -1.15
CNOT9-207ENST00000489687 IFNL2Q8IZJ0 200 aa7.85□□□□□ -1.15
CNOT9-207ENST00000489687 SLC4A9Q96Q91 983 aa7.85□□□□□ -1.15
CNOT9-207ENST00000489687 ATG3Q9NT62 314 aa7.85□□□□□ -1.15
CNOT9-207ENST00000489687 COL3A1P02461 1466 aaPredicted RBP7.85□□□□□ -1.15
CNOT9-207ENST00000489687 CICQ96RK0 1608 aaPredicted RBP7.85□□□□□ -1.15
CNOT9-207ENST00000489687 SLC16A10Q8TF71 515 aa7.84□□□□□ -1.15
CNOT9-207ENST00000489687 SMARCC1Q92922 1105 aaPredicted RBP7.84□□□□□ -1.15
CNOT9-207ENST00000489687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.84□□□□□ -1.15
CNOT9-207ENST00000489687 FARP1Q9Y4F1 1045 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms