RNA–Protein interactions for RNA: ENST00000489198.1

MSRB1-204, Transcript of methionine sulfoxide reductase B1, humanhuman

TSL 3

Gene MSRB1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-204ENST00000489198 ITPK1Q13572 414 aa16.29■□□□□ 0.2
MSRB1-204ENST00000489198 MTHFSDQ2M296 383 aaKnown RBP16.29■□□□□ 0.2
MSRB1-204ENST00000489198 COL23A1Q86Y22 540 aaPredicted RBP16.29■□□□□ 0.2
MSRB1-204ENST00000489198 LINC00116Q8NCU8 138 aa16.29■□□□□ 0.2
MSRB1-204ENST00000489198 ADAMTS7Q9UKP4 1686 aa16.29■□□□□ 0.2
MSRB1-204ENST00000489198 U2SURPO15042 1029 aaKnown RBP16.28■□□□□ 0.2
MSRB1-204ENST00000489198 ATP6V1AP38606 617 aa16.28■□□□□ 0.2
MSRB1-204ENST00000489198 IFFO2Q5TF58 517 aa16.28■□□□□ 0.2
MSRB1-204ENST00000489198 NFATC2IPQ8NCF5 419 aa16.28■□□□□ 0.2
MSRB1-204ENST00000489198 AK7Q96M32 723 aa16.28■□□□□ 0.2
MSRB1-204ENST00000489198 ARXQ96QS3 562 aa16.28■□□□□ 0.2
MSRB1-204ENST00000489198 NUDCQ9Y266 331 aa16.28■□□□□ 0.2
MSRB1-204ENST00000489198 SCN11AQ9UI33 1791 aa16.28■□□□□ 0.2
MSRB1-204ENST00000489198 SSFA2P28290 1259 aa16.27■□□□□ 0.2
MSRB1-204ENST00000489198 POLD1P28340 1107 aa16.27■□□□□ 0.2
MSRB1-204ENST00000489198 SLC4A9Q96Q91 983 aa16.27■□□□□ 0.2
MSRB1-204ENST00000489198 SLC52A2Q9HAB3 445 aa16.27■□□□□ 0.2
MSRB1-204ENST00000489198 UTRNP46939 3433 aa16.26■□□□□ 0.19
MSRB1-204ENST00000489198 RNMTO43148 476 aaKnown RBP16.26■□□□□ 0.19
MSRB1-204ENST00000489198 RC3H1Q5TC82 1133 aaKnown RBP16.26■□□□□ 0.19
MSRB1-204ENST00000489198 GAS2L2Q8NHY3 880 aa16.26■□□□□ 0.19
MSRB1-204ENST00000489198 RSPH6AQ9H0K4 717 aa16.26■□□□□ 0.19
MSRB1-204ENST00000489198 CICQ96RK0 1608 aaPredicted RBP16.26■□□□□ 0.19
MSRB1-204ENST00000489198 AMIGO3Q86WK7 504 aa16.25■□□□□ 0.19
MSRB1-204ENST00000489198 SYT17Q9BSW7 474 aa16.25■□□□□ 0.19
MSRB1-204ENST00000489198 FHDC1Q9C0D6 1143 aaPredicted RBP16.25■□□□□ 0.19
MSRB1-204ENST00000489198 LGR6Q9HBX8 967 aa16.25■□□□□ 0.19
MSRB1-204ENST00000489198 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
MSRB1-204ENST00000489198 CNTNAP4Q9C0A0 1308 aa16.24■□□□□ 0.19
MSRB1-204ENST00000489198 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.24■□□□□ 0.19
MSRB1-204ENST00000489198 FCHSD2O94868 740 aa16.23■□□□□ 0.19
MSRB1-204ENST00000489198 RBM42Q9BTD8 480 aaKnown RBP16.23■□□□□ 0.19
MSRB1-204ENST00000489198 GOLGB1Q14789 3259 aaKnown RBP16.23■□□□□ 0.19
MSRB1-204ENST00000489198 GNAT3A8MTJ3 354 aa16.22■□□□□ 0.19
MSRB1-204ENST00000489198 GNPATO15228 680 aa16.22■□□□□ 0.19
MSRB1-204ENST00000489198 MSH5O43196 834 aa16.22■□□□□ 0.19
MSRB1-204ENST00000489198 ADRA2BP18089 450 aa16.22■□□□□ 0.19
MSRB1-204ENST00000489198 PRKAR2BP31323 418 aa16.22■□□□□ 0.19
MSRB1-204ENST00000489198 COL5A3P25940 1745 aaPredicted RBP16.22■□□□□ 0.19
MSRB1-204ENST00000489198 PTCD1O75127 700 aaKnown RBP16.21■□□□□ 0.19
MSRB1-204ENST00000489198 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
MSRB1-204ENST00000489198 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
MSRB1-204ENST00000489198 RALBP1Q15311 655 aa16.21■□□□□ 0.19
MSRB1-204ENST00000489198 PHACTR3Q96KR7 559 aa16.21■□□□□ 0.19
MSRB1-204ENST00000489198 CEMIPQ8WUJ3 1361 aa16.21■□□□□ 0.19
MSRB1-204ENST00000489198 RTCBQ9Y3I0 505 aaKnown RBP16.2■□□□□ 0.18
MSRB1-204ENST00000489198 DCAF8L1A6NGE4 600 aa16.19■□□□□ 0.18
MSRB1-204ENST00000489198 RPS6KA4O75676 772 aa16.19■□□□□ 0.18
MSRB1-204ENST00000489198 PHF14O94880 888 aa16.19■□□□□ 0.18
MSRB1-204ENST00000489198 ZEB1P37275 1124 aaPredicted RBP16.19■□□□□ 0.18
MSRB1-204ENST00000489198 VSIG10Q8N0Z9 540 aa16.19■□□□□ 0.18
MSRB1-204ENST00000489198 IL17REQ8NFR9 667 aa16.19■□□□□ 0.18
MSRB1-204ENST00000489198 KCPQ6ZWJ8 1503 aa16.19■□□□□ 0.18
MSRB1-204ENST00000489198 MSL1Q68DK7 614 aa16.18■□□□□ 0.18
MSRB1-204ENST00000489198 TJP1Q07157 1748 aa16.18■□□□□ 0.18
MSRB1-204ENST00000489198 CRKLP46109 303 aaKnown RBP16.17■□□□□ 0.18
MSRB1-204ENST00000489198 DDX10Q13206 875 aaKnown RBP16.17■□□□□ 0.18
MSRB1-204ENST00000489198 TRAPPC3LQ5T215 181 aa16.17■□□□□ 0.18
MSRB1-204ENST00000489198 HTATSF1O43719 755 aaKnown RBP16.16■□□□□ 0.18
MSRB1-204ENST00000489198 TEFQ10587 303 aa16.16■□□□□ 0.18
MSRB1-204ENST00000489198 SLC39A6Q13433 755 aa16.16■□□□□ 0.18
MSRB1-204ENST00000489198 SMIM5Q71RC9 77 aa16.16■□□□□ 0.18
MSRB1-204ENST00000489198 UBR2Q8IWV8 1755 aa16.15■□□□□ 0.18
MSRB1-204ENST00000489198 VIRMAQ69YN4 1812 aaKnown RBP16.15■□□□□ 0.18
MSRB1-204ENST00000489198 ARHGEF1Q92888 912 aaKnown RBP16.15■□□□□ 0.18
MSRB1-204ENST00000489198 CD2APQ9Y5K6 639 aa16.15■□□□□ 0.18
MSRB1-204ENST00000489198 MYH14Q7Z406 1995 aaKnown RBP16.15■□□□□ 0.18
MSRB1-204ENST00000489198 SIPA1L3O60292 1781 aaPredicted RBP16.14■□□□□ 0.17
MSRB1-204ENST00000489198 CYP19A1P11511 503 aaPredicted RBP16.14■□□□□ 0.17
MSRB1-204ENST00000489198 INTS5Q6P9B9 1019 aaKnown RBP16.14■□□□□ 0.17
MSRB1-204ENST00000489198 ZNF790Q6PG37 636 aa16.14■□□□□ 0.17
MSRB1-204ENST00000489198 DNAJC10Q8IXB1 793 aa16.13■□□□□ 0.17
MSRB1-204ENST00000489198 TTC5Q8N0Z6 440 aa16.13■□□□□ 0.17
MSRB1-204ENST00000489198 NLGN1Q8N2Q7 840 aa16.13■□□□□ 0.17
MSRB1-204ENST00000489198 PLEKHF1Q96S99 279 aa16.13■□□□□ 0.17
MSRB1-204ENST00000489198 CCDC87Q9NVE4 849 aa16.13■□□□□ 0.17
MSRB1-204ENST00000489198 MYBBP1AQ9BQG0 1328 aaKnown RBP16.13■□□□□ 0.17
MSRB1-204ENST00000489198 RFC4P35249 363 aa16.12■□□□□ 0.17
MSRB1-204ENST00000489198 PNNQ9H307 717 aaKnown RBP16.12■□□□□ 0.17
MSRB1-204ENST00000489198 GYS1P13807 737 aa16.11■□□□□ 0.17
MSRB1-204ENST00000489198 NLGN2Q8NFZ4 835 aa16.11■□□□□ 0.17
MSRB1-204ENST00000489198 RTF1Q92541 710 aaKnown RBP16.11■□□□□ 0.17
MSRB1-204ENST00000489198 SOS1Q07889 1333 aaPredicted RBP16.11■□□□□ 0.17
MSRB1-204ENST00000489198 HEG1Q9ULI3 1381 aa16.11■□□□□ 0.17
MSRB1-204ENST00000489198 NEFMP07197 916 aa16.1■□□□□ 0.17
MSRB1-204ENST00000489198 KLHL34Q8N239 644 aa16.1■□□□□ 0.17
MSRB1-204ENST00000489198 ZNF496Q96IT1 587 aaPredicted RBP16.1■□□□□ 0.17
MSRB1-204ENST00000489198 TEX13AQ9BXU3 409 aaPredicted RBP16.1■□□□□ 0.17
MSRB1-204ENST00000489198 USP42Q9H9J4 1324 aaKnown RBP16.1■□□□□ 0.17
MSRB1-204ENST00000489198 C4AP0C0L4 1744 aa16.1■□□□□ 0.17
MSRB1-204ENST00000489198 STARD3NLO95772 234 aa16.09■□□□□ 0.17
MSRB1-204ENST00000489198 MMP10P09238 476 aa16.09■□□□□ 0.17
MSRB1-204ENST00000489198 FMNL2Q96PY5 1086 aa16.09■□□□□ 0.17
MSRB1-204ENST00000489198 BTBD11A6QL63 1104 aa16.08■□□□□ 0.16
MSRB1-204ENST00000489198 MCM10Q7L590 875 aa16.08■□□□□ 0.16
MSRB1-204ENST00000489198 ZBTB1Q9Y2K1 713 aa16.08■□□□□ 0.16
MSRB1-204ENST00000489198 NFE2L2Q16236 605 aa16.07■□□□□ 0.16
MSRB1-204ENST00000489198 PRKRIP1Q9H875 184 aaPredicted RBP16.07■□□□□ 0.16
MSRB1-204ENST00000489198 COL15A1P39059 1388 aa16.07■□□□□ 0.16
MSRB1-204ENST00000489198 YY1P25490 414 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms