RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 SCTRP47872 440 aa6.97□□□□□ -1.29
KDM3A-213ENST00000488971 RETREG2Q8NC44 543 aa6.97□□□□□ -1.29
KDM3A-213ENST00000488971 ARHGEF10LQ9HCE6 1279 aa6.97□□□□□ -1.29
KDM3A-213ENST00000488971 DNMT3AQ9Y6K1 912 aaPredicted RBP6.97□□□□□ -1.29
KDM3A-213ENST00000488971 CLN3Q13286 438 aa6.96□□□□□ -1.3
KDM3A-213ENST00000488971 NBPF10Q6P3W6 841 aaKnown RBP6.96□□□□□ -1.3
KDM3A-213ENST00000488971 NBPF15Q8N660 670 aa6.96□□□□□ -1.3
KDM3A-213ENST00000488971 NEDD1Q8NHV4 660 aa6.96□□□□□ -1.3
KDM3A-213ENST00000488971 CALR3Q96L12 384 aaKnown RBP6.96□□□□□ -1.3
KDM3A-213ENST00000488971 GRIP2Q9C0E4 1043 aa6.96□□□□□ -1.3
KDM3A-213ENST00000488971 TIMMDC1Q9NPL8 285 aa6.96□□□□□ -1.3
KDM3A-213ENST00000488971 TBC1D2BQ9UPU7 963 aa6.96□□□□□ -1.3
KDM3A-213ENST00000488971 ABL2P42684 1182 aa6.95□□□□□ -1.3
KDM3A-213ENST00000488971 GLMNQ92990 594 aa6.95□□□□□ -1.3
KDM3A-213ENST00000488971 OSBPL3Q9H4L5 887 aa6.95□□□□□ -1.3
KDM3A-213ENST00000488971 NDUFB9Q9Y6M9 179 aa6.95□□□□□ -1.3
KDM3A-213ENST00000488971 POM121CA8CG34 1229 aa6.94□□□□□ -1.3
KDM3A-213ENST00000488971 PHF20L1A8MW92 1017 aa6.94□□□□□ -1.3
KDM3A-213ENST00000488971 WASLO00401 505 aaPredicted RBP6.94□□□□□ -1.3
KDM3A-213ENST00000488971 IGHA1P01876 353 aa6.94□□□□□ -1.3
KDM3A-213ENST00000488971 BCRP11274 1271 aa6.94□□□□□ -1.3
KDM3A-213ENST00000488971 FOXK2Q01167 660 aa6.94□□□□□ -1.3
KDM3A-213ENST00000488971 TAS1R3Q7RTX0 852 aa6.94□□□□□ -1.3
KDM3A-213ENST00000488971 PODNQ7Z5L7 613 aa6.94□□□□□ -1.3
KDM3A-213ENST00000488971 NUCKS1Q9H1E3 243 aaKnown RBP6.94□□□□□ -1.3
KDM3A-213ENST00000488971 RAB6BQ9NRW1 208 aa6.94□□□□□ -1.3
KDM3A-213ENST00000488971 NSFL1CQ9UNZ2 370 aaKnown RBP6.94□□□□□ -1.3
KDM3A-213ENST00000488971 SPATA31C2B4DYI2 1134 aa6.93□□□□□ -1.3
KDM3A-213ENST00000488971 MYCP01106 439 aaPredicted RBP6.93□□□□□ -1.3
KDM3A-213ENST00000488971 F11P03951 625 aa6.93□□□□□ -1.3
KDM3A-213ENST00000488971 MX2P20592 715 aa6.93□□□□□ -1.3
KDM3A-213ENST00000488971 WDR44Q5JSH3 913 aa6.93□□□□□ -1.3
KDM3A-213ENST00000488971 CNTNAP5Q8WYK1 1306 aa6.93□□□□□ -1.3
KDM3A-213ENST00000488971 GNRH1P01148 92 aa6.92□□□□□ -1.3
KDM3A-213ENST00000488971 GTF2E1P29083 439 aaPredicted RBP6.92□□□□□ -1.3
KDM3A-213ENST00000488971 PDE4CQ08493 712 aa6.92□□□□□ -1.3
KDM3A-213ENST00000488971 BEND7Q8N7W2 519 aaPredicted RBP6.92□□□□□ -1.3
KDM3A-213ENST00000488971 ACDQ96AP0 544 aa6.92□□□□□ -1.3
KDM3A-213ENST00000488971 PHKA2P46019 1235 aa6.91□□□□□ -1.3
KDM3A-213ENST00000488971 IRF5Q13568 498 aa6.91□□□□□ -1.3
KDM3A-213ENST00000488971 AEBP1Q8IUX7 1158 aa6.91□□□□□ -1.3
KDM3A-213ENST00000488971 CNKSR1Q969H4 720 aa6.91□□□□□ -1.3
KDM3A-213ENST00000488971 ZSCAN10Q96SZ4 725 aaPredicted RBP6.91□□□□□ -1.3
KDM3A-213ENST00000488971 ESYT1Q9BSJ8 1104 aa6.91□□□□□ -1.3
KDM3A-213ENST00000488971 GPAMQ9HCL2 828 aa6.91□□□□□ -1.3
KDM3A-213ENST00000488971 ACIN1Q9UKV3 1341 aaKnown RBP6.91□□□□□ -1.3
KDM3A-213ENST00000488971 CENPCQ03188 943 aa6.9□□□□□ -1.3
KDM3A-213ENST00000488971 WASHC4Q2M389 1173 aa6.9□□□□□ -1.3
KDM3A-213ENST00000488971 GNASQ5JWF2 1037 aa6.9□□□□□ -1.3
KDM3A-213ENST00000488971 GPR37L1O60883 481 aa6.89□□□□□ -1.31
KDM3A-213ENST00000488971 IL2RAP01589 272 aa6.89□□□□□ -1.31
KDM3A-213ENST00000488971 MAP2K3P46734 347 aa6.89□□□□□ -1.31
KDM3A-213ENST00000488971 TMEM214Q6NUQ4 689 aaKnown RBP6.89□□□□□ -1.31
KDM3A-213ENST00000488971 PBXIP1Q96AQ6 731 aa6.89□□□□□ -1.31
KDM3A-213ENST00000488971 CCDC85AQ96PX6 553 aaPredicted RBP6.89□□□□□ -1.31
KDM3A-213ENST00000488971 CEP126Q9P2H0 1117 aa6.89□□□□□ -1.31
KDM3A-213ENST00000488971 PHF24Q9UPV7 400 aa6.89□□□□□ -1.31
KDM3A-213ENST00000488971 CSB-PGBD3P0DP91 1061 aa6.88□□□□□ -1.31
KDM3A-213ENST00000488971 ESCO1Q5FWF5 840 aa6.88□□□□□ -1.31
KDM3A-213ENST00000488971 HDGFL1Q5TGJ6 251 aa6.88□□□□□ -1.31
KDM3A-213ENST00000488971 PGBD3Q8N328 593 aa6.88□□□□□ -1.31
KDM3A-213ENST00000488971 ADAMTS19Q8TE59 1207 aa6.88□□□□□ -1.31
KDM3A-213ENST00000488971 DCAF5Q96JK2 942 aa6.88□□□□□ -1.31
KDM3A-213ENST00000488971 CDCA7Q9BWT1 371 aaPredicted RBP6.88□□□□□ -1.31
KDM3A-213ENST00000488971 CFHR5Q9BXR6 569 aa6.88□□□□□ -1.31
KDM3A-213ENST00000488971 OXCT2Q9BYC2 517 aaPredicted RBP6.88□□□□□ -1.31
KDM3A-213ENST00000488971 A0A1B0GTH6 734 aa6.87□□□□□ -1.31
KDM3A-213ENST00000488971 MSTNO14793 375 aa6.87□□□□□ -1.31
KDM3A-213ENST00000488971 PLA2G4EQ3MJ16 856 aa6.87□□□□□ -1.31
KDM3A-213ENST00000488971 XAGE2Q96GT9 111 aa6.87□□□□□ -1.31
KDM3A-213ENST00000488971 PATL2C9JE40 543 aaKnown RBP6.86□□□□□ -1.31
KDM3A-213ENST00000488971 OIP5O43482 229 aa6.86□□□□□ -1.31
KDM3A-213ENST00000488971 EIF4G2P78344 907 aaKnown RBP eCLIP6.86□□□□□ -1.31
KDM3A-213ENST00000488971 SRPK2P78362 688 aaKnown RBP6.86□□□□□ -1.31
KDM3A-213ENST00000488971 CFAP70Q5T0N1 1121 aa6.86□□□□□ -1.31
KDM3A-213ENST00000488971 LRRC4BQ9NT99 713 aa6.86□□□□□ -1.31
KDM3A-213ENST00000488971 DOLKQ9UPQ8 538 aa6.86□□□□□ -1.31
KDM3A-213ENST00000488971 USTQ9Y2C2 406 aa6.86□□□□□ -1.31
KDM3A-213ENST00000488971 USP4Q13107 963 aa6.85□□□□□ -1.31
KDM3A-213ENST00000488971 SLFNL1Q499Z3 407 aa6.85□□□□□ -1.31
KDM3A-213ENST00000488971 C4orf17Q53FE4 359 aa6.85□□□□□ -1.31
KDM3A-213ENST00000488971 EFHC2Q5JST6 749 aa6.85□□□□□ -1.31
KDM3A-213ENST00000488971 RUBCNLQ9H714 662 aa6.85□□□□□ -1.31
KDM3A-213ENST00000488971 RRAGCQ9HB90 399 aa6.85□□□□□ -1.31
KDM3A-213ENST00000488971 MSX1P28360 303 aa6.84□□□□□ -1.31
KDM3A-213ENST00000488971 LBRQ14739 615 aaKnown RBP6.84□□□□□ -1.31
KDM3A-213ENST00000488971 TMCO4Q5TGY1 634 aa6.84□□□□□ -1.31
KDM3A-213ENST00000488971 GALNT6Q8NCL4 622 aa6.84□□□□□ -1.31
KDM3A-213ENST00000488971 KLRG1Q96E93 195 aa6.84□□□□□ -1.31
KDM3A-213ENST00000488971 FHDC1Q9C0D6 1143 aaPredicted RBP6.84□□□□□ -1.31
KDM3A-213ENST00000488971 ALG2Q9H553 416 aa6.84□□□□□ -1.31
KDM3A-213ENST00000488971 HRH3Q9Y5N1 445 aa6.84□□□□□ -1.31
KDM3A-213ENST00000488971 THBS1P07996 1170 aa6.83□□□□□ -1.32
KDM3A-213ENST00000488971 BMP4P12644 408 aa6.83□□□□□ -1.32
KDM3A-213ENST00000488971 TSGA10IPQ3SY00 556 aa6.83□□□□□ -1.32
KDM3A-213ENST00000488971 OXLD1Q5BKU9 147 aa6.83□□□□□ -1.32
KDM3A-213ENST00000488971 RNF135Q8IUD6 432 aa6.83□□□□□ -1.32
KDM3A-213ENST00000488971 PPP1R12CQ9BZL4 782 aa6.83□□□□□ -1.32
KDM3A-213ENST00000488971 GZF1Q9H116 711 aaPredicted RBP6.83□□□□□ -1.32
KDM3A-213ENST00000488971 GDF2Q9UK05 429 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms