RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 KDM3BQ7LBC6 1761 aa17.79■□□□□ 0.44
RPL13A-212ENST00000488946 N4BP2Q86UW6 1770 aaPredicted RBP17.79■□□□□ 0.44
RPL13A-212ENST00000488946 NBPF6Q5VWK0 638 aa17.79■□□□□ 0.44
RPL13A-212ENST00000488946 DDX17Q92841 729 aaKnown RBP17.79■□□□□ 0.44
RPL13A-212ENST00000488946 NBPF4Q96M43 638 aa17.79■□□□□ 0.44
RPL13A-212ENST00000488946 CACNA1FO60840 1977 aa17.79■□□□□ 0.44
RPL13A-212ENST00000488946 XPCQ01831 940 aaPredicted RBP17.78■□□□□ 0.44
RPL13A-212ENST00000488946 USHBP1Q8N6Y0 703 aa17.78■□□□□ 0.44
RPL13A-212ENST00000488946 RRAGDQ9NQL2 400 aaPredicted RBP17.78■□□□□ 0.44
RPL13A-212ENST00000488946 COL16A1Q07092 1604 aaPredicted RBP17.78■□□□□ 0.44
RPL13A-212ENST00000488946 IL17REQ8NFR9 667 aa17.78■□□□□ 0.44
RPL13A-212ENST00000488946 CRYBG1Q9Y4K1 1723 aa17.78■□□□□ 0.44
RPL13A-212ENST00000488946 MIS18AQ9NYP9 233 aa17.77■□□□□ 0.44
RPL13A-212ENST00000488946 ABCC6O95255 1503 aa17.77■□□□□ 0.44
RPL13A-212ENST00000488946 SOS2Q07890 1332 aaPredicted RBP17.77■□□□□ 0.43
RPL13A-212ENST00000488946 OVOS2A0A0G2JMS6 1433 aa17.76■□□□□ 0.43
RPL13A-212ENST00000488946 RGPD5Q99666 1765 aa17.76■□□□□ 0.43
RPL13A-212ENST00000488946 NUCB1Q02818 461 aa17.76■□□□□ 0.43
RPL13A-212ENST00000488946 LRRC59Q96AG4 307 aaKnown RBP17.76■□□□□ 0.43
RPL13A-212ENST00000488946 ADAMTS7Q9UKP4 1686 aa17.75■□□□□ 0.43
RPL13A-212ENST00000488946 HSP90AA1P07900 732 aaKnown RBP17.75■□□□□ 0.43
RPL13A-212ENST00000488946 ATP10DQ9P241 1426 aa17.75■□□□□ 0.43
RPL13A-212ENST00000488946 GCC1Q96CN9 775 aa17.75■□□□□ 0.43
RPL13A-212ENST00000488946 COL18A1P39060 1754 aa17.75■□□□□ 0.43
RPL13A-212ENST00000488946 PXDNQ92626 1479 aa17.74■□□□□ 0.43
RPL13A-212ENST00000488946 TAF7Q15545 349 aaPredicted RBP17.73■□□□□ 0.43
RPL13A-212ENST00000488946 SIRT2Q8IXJ6 389 aa17.73■□□□□ 0.43
RPL13A-212ENST00000488946 C1orf115Q9H7X2 142 aa17.73■□□□□ 0.43
RPL13A-212ENST00000488946 TNS3Q68CZ2 1445 aa17.73■□□□□ 0.43
RPL13A-212ENST00000488946 SLC4A2P04920 1241 aa17.72■□□□□ 0.43
RPL13A-212ENST00000488946 JCADQ9P266 1359 aa17.72■□□□□ 0.43
RPL13A-212ENST00000488946 ANKRD24Q8TF21 1146 aa17.72■□□□□ 0.43
RPL13A-212ENST00000488946 SIPA1L3O60292 1781 aaPredicted RBP17.71■□□□□ 0.43
RPL13A-212ENST00000488946 PDE4CQ08493 712 aa17.71■□□□□ 0.43
RPL13A-212ENST00000488946 ZBTB7CA1YPR0 619 aa17.71■□□□□ 0.43
RPL13A-212ENST00000488946 PXDNLA1KZ92 1463 aa17.71■□□□□ 0.42
RPL13A-212ENST00000488946 AMOTQ4VCS5 1084 aa17.7■□□□□ 0.42
RPL13A-212ENST00000488946 AKAP4Q5JQC9 854 aa17.7■□□□□ 0.42
RPL13A-212ENST00000488946 CHD1LQ86WJ1 897 aa17.7■□□□□ 0.42
RPL13A-212ENST00000488946 PLEKHO1Q53GL0 409 aaPredicted RBP17.7■□□□□ 0.42
RPL13A-212ENST00000488946 CCDC30Q5VVM6 783 aa17.7■□□□□ 0.42
RPL13A-212ENST00000488946 LMOD2Q6P5Q4 547 aa17.7■□□□□ 0.42
RPL13A-212ENST00000488946 ERBB3P21860 1342 aa17.69■□□□□ 0.42
RPL13A-212ENST00000488946 SEC24BO95487 1268 aa17.69■□□□□ 0.42
RPL13A-212ENST00000488946 G2E3Q7L622 706 aa17.69■□□□□ 0.42
RPL13A-212ENST00000488946 NAP1L5Q96NT1 182 aaPredicted RBP17.69■□□□□ 0.42
RPL13A-212ENST00000488946 STK31Q9BXU1 1019 aa17.69■□□□□ 0.42
RPL13A-212ENST00000488946 AXIN2Q9Y2T1 843 aa17.69■□□□□ 0.42
RPL13A-212ENST00000488946 PLEKHG2Q9H7P9 1386 aa17.68■□□□□ 0.42
RPL13A-212ENST00000488946 SPATA31A3Q5VYP0 1347 aa17.68■□□□□ 0.42
RPL13A-212ENST00000488946 ZNF530Q6P9A1 599 aaPredicted RBP17.67■□□□□ 0.42
RPL13A-212ENST00000488946 ANKRD44Q8N8A2 993 aa17.67■□□□□ 0.42
RPL13A-212ENST00000488946 CCT4P50991 539 aaKnown RBP17.67■□□□□ 0.42
RPL13A-212ENST00000488946 LNPKQ9C0E8 428 aa17.67■□□□□ 0.42
RPL13A-212ENST00000488946 HOXB7P09629 217 aa17.66■□□□□ 0.42
RPL13A-212ENST00000488946 RPAP2Q8IXW5 612 aaPredicted RBP17.66■□□□□ 0.42
RPL13A-212ENST00000488946 FLIIQ13045 1269 aa17.65■□□□□ 0.42
RPL13A-212ENST00000488946 BECN1Q14457 450 aa17.65■□□□□ 0.42
RPL13A-212ENST00000488946 LGR6Q9HBX8 967 aa17.65■□□□□ 0.42
RPL13A-212ENST00000488946 SPATA31A6Q5VVP1 1343 aa17.65■□□□□ 0.42
RPL13A-212ENST00000488946 CEP85Q6P2H3 762 aa17.65■□□□□ 0.42
RPL13A-212ENST00000488946 MEIS3Q99687 375 aa17.65■□□□□ 0.42
RPL13A-212ENST00000488946 DCTPP1Q9H773 170 aa17.65■□□□□ 0.42
RPL13A-212ENST00000488946 EIF4A1P60842 406 aaKnown RBP17.64■□□□□ 0.41
RPL13A-212ENST00000488946 CPDO75976 1380 aa17.63■□□□□ 0.41
RPL13A-212ENST00000488946 PKD1L3Q7Z443 1732 aa17.63■□□□□ 0.41
RPL13A-212ENST00000488946 SCN11AQ9UI33 1791 aa17.63■□□□□ 0.41
RPL13A-212ENST00000488946 RNMTO43148 476 aaKnown RBP17.63■□□□□ 0.41
RPL13A-212ENST00000488946 ANKRD45Q5TZF3 282 aa17.63■□□□□ 0.41
RPL13A-212ENST00000488946 TBC1D32Q96NH3 1257 aa17.63■□□□□ 0.41
RPL13A-212ENST00000488946 COL22A1Q8NFW1 1626 aaPredicted RBP17.63■□□□□ 0.41
RPL13A-212ENST00000488946 F6X3S4 739 aa17.62■□□□□ 0.41
RPL13A-212ENST00000488946 ZC3H6P61129 1189 aaKnown RBP17.62■□□□□ 0.41
RPL13A-212ENST00000488946 BMP2KLQ5H9B9 411 aa17.62■□□□□ 0.41
RPL13A-212ENST00000488946 C1orf141Q5JVX7 400 aa17.62■□□□□ 0.41
RPL13A-212ENST00000488946 UPF2Q9HAU5 1272 aaKnown RBP17.62■□□□□ 0.41
RPL13A-212ENST00000488946 PRDM4Q9UKN5 801 aa17.61■□□□□ 0.41
RPL13A-212ENST00000488946 TEFQ10587 303 aa17.61■□□□□ 0.41
RPL13A-212ENST00000488946 HDGFL1Q5TGJ6 251 aa17.61■□□□□ 0.41
RPL13A-212ENST00000488946 CHMP4AQ9BY43 222 aa17.61■□□□□ 0.41
RPL13A-212ENST00000488946 HEG1Q9ULI3 1381 aa17.6■□□□□ 0.41
RPL13A-212ENST00000488946 ABCA3Q99758 1704 aa17.6■□□□□ 0.41
RPL13A-212ENST00000488946 MEGF6O75095 1541 aa17.6■□□□□ 0.41
RPL13A-212ENST00000488946 FKBP5Q13451 457 aaPredicted RBP17.6■□□□□ 0.41
RPL13A-212ENST00000488946 MPRIPQ6WCQ1 1025 aa17.6■□□□□ 0.41
RPL13A-212ENST00000488946 SLKQ9H2G2 1235 aaPredicted RBP17.6■□□□□ 0.41
RPL13A-212ENST00000488946 NUTM2BA6NNL0 878 aaPredicted RBP17.59■□□□□ 0.41
RPL13A-212ENST00000488946 NUTM2EB1AL46 878 aaPredicted RBP17.59■□□□□ 0.41
RPL13A-212ENST00000488946 NUTM2AQ8IVF1 878 aaPredicted RBP17.59■□□□□ 0.41
RPL13A-212ENST00000488946 ANTXR1Q9H6X2 564 aa17.59■□□□□ 0.41
RPL13A-212ENST00000488946 MRC1P22897 1456 aa17.59■□□□□ 0.41
RPL13A-212ENST00000488946 SLC4A10Q6U841 1118 aa17.59■□□□□ 0.41
RPL13A-212ENST00000488946 PARP4Q9UKK3 1724 aaKnown RBP17.58■□□□□ 0.41
RPL13A-212ENST00000488946 BTBD11A6QL63 1104 aa17.58■□□□□ 0.41
RPL13A-212ENST00000488946 CLCN1P35523 988 aa17.58■□□□□ 0.41
RPL13A-212ENST00000488946 KDM6AO15550 1401 aaPredicted RBP17.57■□□□□ 0.4
RPL13A-212ENST00000488946 KCNQ3O43525 872 aa17.57■□□□□ 0.4
RPL13A-212ENST00000488946 NECTIN2Q92692 538 aa17.57■□□□□ 0.4
RPL13A-212ENST00000488946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.57■□□□□ 0.41e-40■□□□□ 10
RPL13A-212ENST00000488946 HMMRO75330 724 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms