RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 FCHSD2O94868 740 aa14.89□□□□□ -0.03
ARHGEF39-204ENST00000488918 TTC5Q8N0Z6 440 aa14.89□□□□□ -0.03
ARHGEF39-204ENST00000488918 ATG3Q9NT62 314 aa14.89□□□□□ -0.03
ARHGEF39-204ENST00000488918 LRP5O75197 1615 aa14.88□□□□□ -0.03
ARHGEF39-204ENST00000488918 PHF14O94880 888 aa14.88□□□□□ -0.03
ARHGEF39-204ENST00000488918 KLHL34Q8N239 644 aa14.88□□□□□ -0.03
ARHGEF39-204ENST00000488918 MAPK8IP3Q9UPT6 1336 aa14.88□□□□□ -0.03
ARHGEF39-204ENST00000488918 GNPATO15228 680 aa14.87□□□□□ -0.03
ARHGEF39-204ENST00000488918 RNMTO43148 476 aaKnown RBP14.87□□□□□ -0.03
ARHGEF39-204ENST00000488918 SLC52A2Q9HAB3 445 aa14.87□□□□□ -0.03
ARHGEF39-204ENST00000488918 MAP3K5Q99683 1374 aa14.86□□□□□ -0.03
ARHGEF39-204ENST00000488918 PDGFDQ9GZP0 370 aaPredicted RBP14.86□□□□□ -0.03
ARHGEF39-204ENST00000488918 PNPLA7Q6ZV29 1317 aa14.86□□□□□ -0.03
ARHGEF39-204ENST00000488918 KDM6AO15550 1401 aaPredicted RBP14.85□□□□□ -0.03
ARHGEF39-204ENST00000488918 WDR43Q15061 677 aaKnown RBP eCLIP14.85□□□□□ -0.03
ARHGEF39-204ENST00000488918 NPM2Q86SE8 214 aaKnown RBP14.85□□□□□ -0.03
ARHGEF39-204ENST00000488918 ARXQ96QS3 562 aa14.85□□□□□ -0.03
ARHGEF39-204ENST00000488918 RSPH6AQ9H0K4 717 aa14.85□□□□□ -0.03
ARHGEF39-204ENST00000488918 LGR6Q9HBX8 967 aa14.85□□□□□ -0.03
ARHGEF39-204ENST00000488918 RTCBQ9Y3I0 505 aaKnown RBP14.85□□□□□ -0.03
ARHGEF39-204ENST00000488918 MYBBP1AQ9BQG0 1328 aaKnown RBP14.85□□□□□ -0.03
ARHGEF39-204ENST00000488918 COL3A1P02461 1466 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF39-204ENST00000488918 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.83□□□□□ -0.04
ARHGEF39-204ENST00000488918 SSFA2P28290 1259 aa14.83□□□□□ -0.04
ARHGEF39-204ENST00000488918 TRAPPC3LQ5T215 181 aa14.83□□□□□ -0.04
ARHGEF39-204ENST00000488918 LINC00116Q8NCU8 138 aa14.83□□□□□ -0.04
ARHGEF39-204ENST00000488918 LY75O60449 1722 aa14.83□□□□□ -0.04
ARHGEF39-204ENST00000488918 TOGARAM1Q9Y4F4 1720 aa14.83□□□□□ -0.04
ARHGEF39-204ENST00000488918 ITGB4P16144 1822 aa14.82□□□□□ -0.04
ARHGEF39-204ENST00000488918 ZNF316A6NFI3 1004 aaPredicted RBP14.82□□□□□ -0.04
ARHGEF39-204ENST00000488918 RFC4P35249 363 aa14.82□□□□□ -0.04
ARHGEF39-204ENST00000488918 COL23A1Q86Y22 540 aaPredicted RBP14.82□□□□□ -0.04
ARHGEF39-204ENST00000488918 PAPPAQ13219 1627 aa14.81□□□□□ -0.04
ARHGEF39-204ENST00000488918 ITPK1Q13572 414 aa14.81□□□□□ -0.04
ARHGEF39-204ENST00000488918 MSL1Q68DK7 614 aa14.81□□□□□ -0.04
ARHGEF39-204ENST00000488918 PHACTR3Q96KR7 559 aa14.81□□□□□ -0.04
ARHGEF39-204ENST00000488918 BTBD11A6QL63 1104 aa14.8□□□□□ -0.04
ARHGEF39-204ENST00000488918 PTGER2P43116 358 aa14.8□□□□□ -0.04
ARHGEF39-204ENST00000488918 SLC39A6Q13433 755 aa14.8□□□□□ -0.04
ARHGEF39-204ENST00000488918 RC3H1Q5TC82 1133 aaKnown RBP14.8□□□□□ -0.04
ARHGEF39-204ENST00000488918 HTATSF1O43719 755 aaKnown RBP14.79□□□□□ -0.04
ARHGEF39-204ENST00000488918 STARD3NLO95772 234 aa14.79□□□□□ -0.04
ARHGEF39-204ENST00000488918 C5P01031 1676 aa14.79□□□□□ -0.04
ARHGEF39-204ENST00000488918 ADRA2BP18089 450 aa14.79□□□□□ -0.04
ARHGEF39-204ENST00000488918 TEX13AQ9BXU3 409 aaPredicted RBP14.79□□□□□ -0.04
ARHGEF39-204ENST00000488918 FHDC1Q9C0D6 1143 aaPredicted RBP14.79□□□□□ -0.04
ARHGEF39-204ENST00000488918 CNTNAP4Q9C0A0 1308 aa14.78□□□□□ -0.04
ARHGEF39-204ENST00000488918 CRKLP46109 303 aaKnown RBP14.78□□□□□ -0.04
ARHGEF39-204ENST00000488918 CASZ1Q86V15 1759 aa14.78□□□□□ -0.04
ARHGEF39-204ENST00000488918 C4BP0C0L5 1744 aa14.78□□□□□ -0.04
ARHGEF39-204ENST00000488918 ANP32CO43423 234 aa14.77□□□□□ -0.05
ARHGEF39-204ENST00000488918 ZPR1O75312 459 aa14.77□□□□□ -0.05
ARHGEF39-204ENST00000488918 RPS6KA4O75676 772 aa14.77□□□□□ -0.05
ARHGEF39-204ENST00000488918 ZNF790Q6PG37 636 aa14.77□□□□□ -0.05
ARHGEF39-204ENST00000488918 MCM10Q7L590 875 aa14.77□□□□□ -0.05
ARHGEF39-204ENST00000488918 PELP1Q8IZL8 1130 aaKnown RBP14.77□□□□□ -0.05
ARHGEF39-204ENST00000488918 VSIG10Q8N0Z9 540 aa14.77□□□□□ -0.05
ARHGEF39-204ENST00000488918 IL17REQ8NFR9 667 aa14.77□□□□□ -0.05
ARHGEF39-204ENST00000488918 FMNL2Q96PY5 1086 aa14.77□□□□□ -0.05
ARHGEF39-204ENST00000488918 PRKRIP1Q9H875 184 aaPredicted RBP14.77□□□□□ -0.05
ARHGEF39-204ENST00000488918 LMOD3Q0VAK6 560 aa14.76□□□□□ -0.05
ARHGEF39-204ENST00000488918 NLGN1Q8N2Q7 840 aa14.76□□□□□ -0.05
ARHGEF39-204ENST00000488918 SYT17Q9BSW7 474 aa14.76□□□□□ -0.05
ARHGEF39-204ENST00000488918 CCDC87Q9NVE4 849 aa14.76□□□□□ -0.05
ARHGEF39-204ENST00000488918 NFE2L2Q16236 605 aa14.75□□□□□ -0.05
ARHGEF39-204ENST00000488918 DNAJC10Q8IXB1 793 aa14.75□□□□□ -0.05
ARHGEF39-204ENST00000488918 PNISRQ8TF01 805 aaKnown RBP14.75□□□□□ -0.05
ARHGEF39-204ENST00000488918 ZNF330Q9Y3S2 320 aaPredicted RBP14.75□□□□□ -0.05
ARHGEF39-204ENST00000488918 TAF7Q15545 349 aaPredicted RBP14.74□□□□□ -0.05
ARHGEF39-204ENST00000488918 GPR162Q16538 588 aa14.74□□□□□ -0.05
ARHGEF39-204ENST00000488918 ARHGEF1Q92888 912 aaKnown RBP14.74□□□□□ -0.05
ARHGEF39-204ENST00000488918 SLC4A9Q96Q91 983 aa14.74□□□□□ -0.05
ARHGEF39-204ENST00000488918 SCN11AQ9UI33 1791 aa14.74□□□□□ -0.05
ARHGEF39-204ENST00000488918 RIPK4P57078 832 aa14.73□□□□□ -0.05
ARHGEF39-204ENST00000488918 SMIM5Q71RC9 77 aa14.73□□□□□ -0.05
ARHGEF39-204ENST00000488918 SGIP1Q9BQI5 828 aa14.73□□□□□ -0.05
ARHGEF39-204ENST00000488918 PARP3Q9Y6F1 533 aa14.73□□□□□ -0.05
ARHGEF39-204ENST00000488918 MRC1P22897 1456 aa14.73□□□□□ -0.05
ARHGEF39-204ENST00000488918 QSER1Q2KHR3 1735 aa14.72□□□□□ -0.05
ARHGEF39-204ENST00000488918 A0A087WZG4 1122 aa14.72□□□□□ -0.05
ARHGEF39-204ENST00000488918 CANXP27824 592 aaKnown RBP14.72□□□□□ -0.05
ARHGEF39-204ENST00000488918 DCTN1Q14203 1278 aa14.72□□□□□ -0.05
ARHGEF39-204ENST00000488918 NEUROD2Q15784 382 aa14.72□□□□□ -0.05
ARHGEF39-204ENST00000488918 CEMIPQ8WUJ3 1361 aa14.72□□□□□ -0.05
ARHGEF39-204ENST00000488918 CYP19A1P11511 503 aaPredicted RBP14.71□□□□□ -0.05
ARHGEF39-204ENST00000488918 RUNDC1Q96C34 613 aa14.71□□□□□ -0.05
ARHGEF39-204ENST00000488918 ZNF496Q96IT1 587 aaPredicted RBP14.71□□□□□ -0.05
ARHGEF39-204ENST00000488918 TAF1LQ8IZX4 1826 aa14.71□□□□□ -0.06
ARHGEF39-204ENST00000488918 MMP10P09238 476 aa14.7□□□□□ -0.06
ARHGEF39-204ENST00000488918 SNRPA1P09661 255 aaKnown RBP14.7□□□□□ -0.06
ARHGEF39-204ENST00000488918 CCDC146Q8IYE0 955 aa14.7□□□□□ -0.06
ARHGEF39-204ENST00000488918 PLEKHF1Q96S99 279 aa14.7□□□□□ -0.06
ARHGEF39-204ENST00000488918 CD2APQ9Y5K6 639 aa14.7□□□□□ -0.06
ARHGEF39-204ENST00000488918 HEG1Q9ULI3 1381 aa14.7□□□□□ -0.06
ARHGEF39-204ENST00000488918 NPHP1O15259 732 aa14.69□□□□□ -0.06
ARHGEF39-204ENST00000488918 INTS5Q6P9B9 1019 aaKnown RBP14.69□□□□□ -0.06
ARHGEF39-204ENST00000488918 AMIGO3Q86WK7 504 aa14.68□□□□□ -0.06
ARHGEF39-204ENST00000488918 ZNF831Q5JPB2 1677 aa14.68□□□□□ -0.06
ARHGEF39-204ENST00000488918 SRCAPQ6ZRS2 3230 aa14.68□□□□□ -0.06
ARHGEF39-204ENST00000488918 TMPOP42166 694 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms