RNA–Protein interactions for RNA: ENST00000488675.5

TSC2-214, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-214ENST00000488675 PRIM1P49642 420 aaKnown RBP23.31■■□□□ 1.32
TSC2-214ENST00000488675 FLT4P35916 1363 aa23.3■■□□□ 1.32
TSC2-214ENST00000488675 SYTL4Q96C24 671 aaPredicted RBP23.3■■□□□ 1.32
TSC2-214ENST00000488675 ATP10DQ9P241 1426 aa23.3■■□□□ 1.32
TSC2-214ENST00000488675 TUBGCP6Q96RT7 1819 aa23.29■■□□□ 1.32
TSC2-214ENST00000488675 MTHFSP49914 203 aa23.29■■□□□ 1.32
TSC2-214ENST00000488675 EMILIN1Q9Y6C2 1016 aa23.29■■□□□ 1.32
TSC2-214ENST00000488675 INSRP06213 1382 aa23.28■■□□□ 1.32
TSC2-214ENST00000488675 AMPHP49418 695 aa23.28■■□□□ 1.32
TSC2-214ENST00000488675 IP6K1Q92551 441 aa23.28■■□□□ 1.32
TSC2-214ENST00000488675 COL23A1Q86Y22 540 aaPredicted RBP23.27■■□□□ 1.32
TSC2-214ENST00000488675 RTN4Q9NQC3 1192 aaKnown RBP23.27■■□□□ 1.32
TSC2-214ENST00000488675 CCNL1Q9UK58 526 aaPredicted RBP23.27■■□□□ 1.32
TSC2-214ENST00000488675 KAT6BQ8WYB5 2073 aa23.27■■□□□ 1.32
TSC2-214ENST00000488675 LY75O60449 1722 aa23.26■■□□□ 1.31
TSC2-214ENST00000488675 HOXC9P31274 260 aa23.26■■□□□ 1.31
TSC2-214ENST00000488675 GPBP1L1Q9HC44 474 aaPredicted RBP23.26■■□□□ 1.31
TSC2-214ENST00000488675 HSPA6P17066 643 aa23.25■■□□□ 1.31
TSC2-214ENST00000488675 PPM1GO15355 546 aaPredicted RBP23.24■■□□□ 1.31
TSC2-214ENST00000488675 CD2APQ9Y5K6 639 aa23.24■■□□□ 1.31
TSC2-214ENST00000488675 LTV1Q96GA3 475 aaPredicted RBP23.23■■□□□ 1.31
TSC2-214ENST00000488675 CFAP53Q96M91 514 aa23.23■■□□□ 1.31
TSC2-214ENST00000488675 ZCRB1Q8TBF4 217 aaKnown RBP23.22■■□□□ 1.31
TSC2-214ENST00000488675 ADCY9O60503 1353 aa23.22■■□□□ 1.31
TSC2-214ENST00000488675 COL3A1P02461 1466 aaPredicted RBP23.22■■□□□ 1.31
TSC2-214ENST00000488675 FAM208AQ9UK61 1670 aaKnown RBP23.22■■□□□ 1.31
TSC2-214ENST00000488675 DOT1LQ8TEK3 1739 aa23.22■■□□□ 1.31
TSC2-214ENST00000488675 HSP90AB2PQ58FF8 381 aa23.21■■□□□ 1.31
TSC2-214ENST00000488675 MSL1Q68DK7 614 aa23.21■■□□□ 1.31
TSC2-214ENST00000488675 CCER2I3L3R5 266 aa23.17■■□□□ 1.3
TSC2-214ENST00000488675 HMGB2P26583 209 aaKnown RBP23.17■■□□□ 1.3
TSC2-214ENST00000488675 FLAD1Q8NFF5 587 aa23.17■■□□□ 1.3
TSC2-214ENST00000488675 MEGF6O75095 1541 aa23.15■■□□□ 1.3
TSC2-214ENST00000488675 DIAPH1O60610 1272 aaKnown RBP23.15■■□□□ 1.3
TSC2-214ENST00000488675 ZNF526Q8TF50 670 aaPredicted RBP23.15■■□□□ 1.3
TSC2-214ENST00000488675 IL13P35225 146 aa23.14■■□□□ 1.29
TSC2-214ENST00000488675 EIF4A2Q14240 407 aaKnown RBP23.14■■□□□ 1.29
TSC2-214ENST00000488675 ZBTB47Q9UFB7 747 aaPredicted RBP23.14■■□□□ 1.29
TSC2-214ENST00000488675 RGPD2P0DJD1 1756 aa23.12■■□□□ 1.29
TSC2-214ENST00000488675 MRS2Q9HD23 443 aa23.11■■□□□ 1.29
TSC2-214ENST00000488675 NUDCQ9Y266 331 aa23.11■■□□□ 1.29
TSC2-214ENST00000488675 NCAPD2Q15021 1401 aa23.1■■□□□ 1.29
TSC2-214ENST00000488675 C5P01031 1676 aa23.09■■□□□ 1.29
TSC2-214ENST00000488675 CCDC184Q52MB2 194 aa23.09■■□□□ 1.29
TSC2-214ENST00000488675 SPOCK2Q92563 424 aa23.09■■□□□ 1.29
TSC2-214ENST00000488675 IGSF1Q8N6C5 1336 aa23.08■■□□□ 1.29
TSC2-214ENST00000488675 KIF3CO14782 793 aa23.08■■□□□ 1.29
TSC2-214ENST00000488675 NBPF6Q5VWK0 638 aa23.08■■□□□ 1.29
TSC2-214ENST00000488675 NBPF4Q96M43 638 aa23.08■■□□□ 1.29
TSC2-214ENST00000488675 PALLDQ8WX93 1383 aa23.07■■□□□ 1.28
TSC2-214ENST00000488675 EYA1Q99502 592 aa23.07■■□□□ 1.28
TSC2-214ENST00000488675 CREBZFQ9NS37 354 aa23.07■■□□□ 1.28
TSC2-214ENST00000488675 RAPGEF4Q8WZA2 1011 aa23.06■■□□□ 1.28
TSC2-214ENST00000488675 KDRP35968 1356 aa23.04■■□□□ 1.28
TSC2-214ENST00000488675 PNISRQ8TF01 805 aaKnown RBP23.04■■□□□ 1.28
TSC2-214ENST00000488675 TATP17735 454 aaPredicted RBP23.03■■□□□ 1.28
TSC2-214ENST00000488675 APLP1P51693 650 aa23.03■■□□□ 1.28
TSC2-214ENST00000488675 MPRIPQ6WCQ1 1025 aa23.03■■□□□ 1.28
TSC2-214ENST00000488675 AMIGO3Q86WK7 504 aa23.03■■□□□ 1.28
TSC2-214ENST00000488675 USHBP1Q8N6Y0 703 aa23.03■■□□□ 1.28
TSC2-214ENST00000488675 AK7Q96M32 723 aa23.03■■□□□ 1.28
TSC2-214ENST00000488675 PCDH11XQ9BZA7 1347 aa23.03■■□□□ 1.28
TSC2-214ENST00000488675 PCDH11YQ9BZA8 1340 aa23.03■■□□□ 1.28
TSC2-214ENST00000488675 U2SURPO15042 1029 aaKnown RBP23.02■■□□□ 1.28
TSC2-214ENST00000488675 WDR43Q15061 677 aaKnown RBP eCLIP23.02■■□□□ 1.28
TSC2-214ENST00000488675 SMARCC1Q92922 1105 aaPredicted RBP23.02■■□□□ 1.28
TSC2-214ENST00000488675 WWC3Q9ULE0 1092 aa23.02■■□□□ 1.28
TSC2-214ENST00000488675 TAF1LQ8IZX4 1826 aa23.01■■□□□ 1.27
TSC2-214ENST00000488675 U2AF1L5P0DN76 240 aaPredicted RBP23.01■■□□□ 1.27
TSC2-214ENST00000488675 U2AF1Q01081 240 aaKnown RBP eCLIP23.01■■□□□ 1.27
TSC2-214ENST00000488675 C4BP0C0L5 1744 aa23.01■■□□□ 1.27
TSC2-214ENST00000488675 PLEKHG2Q9H7P9 1386 aa23.01■■□□□ 1.27
TSC2-214ENST00000488675 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23■■□□□ 1.27
TSC2-214ENST00000488675 PHF14O94880 888 aa22.99■■□□□ 1.27
TSC2-214ENST00000488675 SULT6B1Q6IMI4 303 aa22.99■■□□□ 1.27
TSC2-214ENST00000488675 DNAJC5GQ8N7S2 189 aa22.99■■□□□ 1.27
TSC2-214ENST00000488675 FCHSD2O94868 740 aa22.98■■□□□ 1.27
TSC2-214ENST00000488675 SSFA2P28290 1259 aa22.98■■□□□ 1.27
TSC2-214ENST00000488675 CHRDL2Q6WN34 429 aa22.98■■□□□ 1.27
TSC2-214ENST00000488675 TOGARAM1Q9Y4F4 1720 aa22.98■■□□□ 1.27
TSC2-214ENST00000488675 CICQ96RK0 1608 aaPredicted RBP22.97■■□□□ 1.27
TSC2-214ENST00000488675 CYP27B1O15528 508 aa22.97■■□□□ 1.27
TSC2-214ENST00000488675 TOMM70O94826 608 aa22.97■■□□□ 1.27
TSC2-214ENST00000488675 SMIM5Q71RC9 77 aa22.97■■□□□ 1.27
TSC2-214ENST00000488675 AEBP1Q8IUX7 1158 aa22.96■■□□□ 1.27
TSC2-214ENST00000488675 RSPH6AQ9H0K4 717 aa22.96■■□□□ 1.27
TSC2-214ENST00000488675 PNNQ9H307 717 aaKnown RBP22.96■■□□□ 1.27
TSC2-214ENST00000488675 ADAMTS8Q9UP79 889 aa22.96■■□□□ 1.27
TSC2-214ENST00000488675 HMOX1P09601 288 aa22.95■■□□□ 1.26
TSC2-214ENST00000488675 PIGBQ92521 554 aa22.94■■□□□ 1.26
TSC2-214ENST00000488675 UBR3Q6ZT12 1888 aa22.94■■□□□ 1.26
TSC2-214ENST00000488675 PKD1L3Q7Z443 1732 aa22.92■■□□□ 1.26
TSC2-214ENST00000488675 LOC102724428A0A0B4J2F2 783 aa22.91■■□□□ 1.26
TSC2-214ENST00000488675 SIK1P57059 783 aa22.91■■□□□ 1.26
TSC2-214ENST00000488675 NKX1-1Q15270 411 aaPredicted RBP22.91■■□□□ 1.26
TSC2-214ENST00000488675 LINC00116Q8NCU8 138 aa22.91■■□□□ 1.26
TSC2-214ENST00000488675 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.91■■□□□ 1.26
TSC2-214ENST00000488675 PRKAR2BP31323 418 aa22.9■■□□□ 1.26
TSC2-214ENST00000488675 PLEKHF1Q96S99 279 aa22.9■■□□□ 1.26
TSC2-214ENST00000488675 PXDNLA1KZ92 1463 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms