RNA–Protein interactions for RNA: ENST00000488625.6

ZEB1-206, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,026 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-206ENST00000488625 PDCP20941 246 aa11.73□□□□□ -0.53
ZEB1-206ENST00000488625 TRIM29Q14134 588 aa11.73□□□□□ -0.53
ZEB1-206ENST00000488625 CLTCL1P53675 1640 aa11.73□□□□□ -0.53
ZEB1-206ENST00000488625 VAMP4O75379 141 aa11.73□□□□□ -0.53
ZEB1-206ENST00000488625 TNMDQ9H2S6 317 aa11.73□□□□□ -0.53
ZEB1-206ENST00000488625 PLA2R1Q13018 1463 aa11.73□□□□□ -0.53
ZEB1-206ENST00000488625 ZNF530Q6P9A1 599 aaPredicted RBP11.73□□□□□ -0.53
ZEB1-206ENST00000488625 TTC21BQ7Z4L5 1316 aa11.73□□□□□ -0.53
ZEB1-206ENST00000488625 LARP1BQ659C4 914 aaKnown RBP11.73□□□□□ -0.53
ZEB1-206ENST00000488625 UPF3BQ9BZI7 483 aaKnown RBP11.73□□□□□ -0.53
ZEB1-206ENST00000488625 TET3O43151 1660 aa11.73□□□□□ -0.53
ZEB1-206ENST00000488625 CEBPZQ03701 1054 aaKnown RBP11.73□□□□□ -0.53
ZEB1-206ENST00000488625 SPG7Q9UQ90 795 aa11.73□□□□□ -0.53
ZEB1-206ENST00000488625 YTHDC2Q9H6S0 1430 aaKnown RBP11.72□□□□□ -0.53
ZEB1-206ENST00000488625 NUTM2BA6NNL0 878 aaPredicted RBP11.72□□□□□ -0.53
ZEB1-206ENST00000488625 NUTM2EB1AL46 878 aaPredicted RBP11.72□□□□□ -0.53
ZEB1-206ENST00000488625 NUTM2AQ8IVF1 878 aaPredicted RBP11.72□□□□□ -0.53
ZEB1-206ENST00000488625 KIF1BPQ96EK5 621 aa11.72□□□□□ -0.53
ZEB1-206ENST00000488625 LAMC1P11047 1609 aa11.72□□□□□ -0.53
ZEB1-206ENST00000488625 MADDQ8WXG6 1647 aa11.72□□□□□ -0.53
ZEB1-206ENST00000488625 NAT10Q9H0A0 1025 aaKnown RBP11.72□□□□□ -0.53
ZEB1-206ENST00000488625 ZRANB1Q9UGI0 708 aa11.72□□□□□ -0.53
ZEB1-206ENST00000488625 APPP05067 770 aa11.72□□□□□ -0.53
ZEB1-206ENST00000488625 CCDC83Q8IWF9 413 aa11.72□□□□□ -0.53
ZEB1-206ENST00000488625 PRKCSHP14314 528 aaPredicted RBP11.72□□□□□ -0.53
ZEB1-206ENST00000488625 CCDC183Q5T5S1 534 aa11.72□□□□□ -0.53
ZEB1-206ENST00000488625 MEIS3Q99687 375 aa11.72□□□□□ -0.53
ZEB1-206ENST00000488625 KRT85P78386 507 aa11.72□□□□□ -0.53
ZEB1-206ENST00000488625 USHBP1Q8N6Y0 703 aa11.72□□□□□ -0.53
ZEB1-206ENST00000488625 ANKRD44Q8N8A2 993 aa11.72□□□□□ -0.53
ZEB1-206ENST00000488625 PRDM11Q9NQV5 511 aa11.72□□□□□ -0.53
ZEB1-206ENST00000488625 ZBTB7BO15156 539 aaPredicted RBP11.71□□□□□ -0.53
ZEB1-206ENST00000488625 SYNE3Q6ZMZ3 975 aa11.71□□□□□ -0.53
ZEB1-206ENST00000488625 RIMS2Q9UQ26 1411 aa11.71□□□□□ -0.53
ZEB1-206ENST00000488625 CLCN1P35523 988 aa11.71□□□□□ -0.53
ZEB1-206ENST00000488625 XPCQ01831 940 aaPredicted RBP11.71□□□□□ -0.53
ZEB1-206ENST00000488625 FLIIQ13045 1269 aa11.71□□□□□ -0.53
ZEB1-206ENST00000488625 TAF7Q15545 349 aaPredicted RBP11.71□□□□□ -0.53
ZEB1-206ENST00000488625 WASHC4Q2M389 1173 aa11.71□□□□□ -0.53
ZEB1-206ENST00000488625 PHACTR3Q96KR7 559 aa11.71□□□□□ -0.53
ZEB1-206ENST00000488625 TULP1O00294 542 aaPredicted RBP11.71□□□□□ -0.54
ZEB1-206ENST00000488625 PRPF40BQ6NWY9 871 aaKnown RBP11.71□□□□□ -0.54
ZEB1-206ENST00000488625 NFXL1Q6ZNB6 911 aa11.71□□□□□ -0.54
ZEB1-206ENST00000488625 MYL6BP14649 208 aa11.71□□□□□ -0.54
ZEB1-206ENST00000488625 RBM25P49756 843 aaKnown RBP11.71□□□□□ -0.54
ZEB1-206ENST00000488625 HMGN5P82970 282 aaKnown RBP11.7□□□□□ -0.54
ZEB1-206ENST00000488625 TRDNQ13061 729 aa11.7□□□□□ -0.54
ZEB1-206ENST00000488625 SPATA32Q96LK8 384 aa11.7□□□□□ -0.54
ZEB1-206ENST00000488625 HOMER1Q86YM7 354 aa11.7□□□□□ -0.54
ZEB1-206ENST00000488625 ACEP12821 1306 aa11.7□□□□□ -0.54
ZEB1-206ENST00000488625 PLEKHM2Q8IWE5 1019 aa11.7□□□□□ -0.54
ZEB1-206ENST00000488625 ZNF396Q96N95 335 aaPredicted RBP11.7□□□□□ -0.54
ZEB1-206ENST00000488625 ZMYM3Q14202 1370 aa11.7□□□□□ -0.54
ZEB1-206ENST00000488625 MAP3K4Q9Y6R4 1608 aa11.69□□□□□ -0.54
ZEB1-206ENST00000488625 BLOC1S2Q6QNY1 142 aa11.69□□□□□ -0.54
ZEB1-206ENST00000488625 TMX3Q96JJ7 454 aa11.69□□□□□ -0.54
ZEB1-206ENST00000488625 NOL10Q9BSC4 688 aaKnown RBP11.69□□□□□ -0.54
ZEB1-206ENST00000488625 NUP62CLQ9H1M0 184 aa11.69□□□□□ -0.54
ZEB1-206ENST00000488625 CFAP65Q6ZU64 1925 aaKnown RBP11.69□□□□□ -0.54
ZEB1-206ENST00000488625 CEP85Q6P2H3 762 aa11.69□□□□□ -0.54
ZEB1-206ENST00000488625 TOM1L2Q6ZVM7 507 aa11.69□□□□□ -0.54
ZEB1-206ENST00000488625 RASSF8Q8NHQ8 419 aa11.69□□□□□ -0.54
ZEB1-206ENST00000488625 NPATQ14207 1427 aa11.69□□□□□ -0.54
ZEB1-206ENST00000488625 CPLX2Q6PUV4 134 aaKnown RBP11.69□□□□□ -0.54
ZEB1-206ENST00000488625 LRSAM1Q6UWE0 723 aa11.69□□□□□ -0.54
ZEB1-206ENST00000488625 LARP6Q9BRS8 491 aaKnown RBP11.69□□□□□ -0.54
ZEB1-206ENST00000488625 ZFYVE16Q7Z3T8 1539 aa11.69□□□□□ -0.54
ZEB1-206ENST00000488625 CAMK4Q16566 473 aa11.69□□□□□ -0.54
ZEB1-206ENST00000488625 KDM4AO75164 1064 aa11.69□□□□□ -0.54
ZEB1-206ENST00000488625 DCTPP1Q9H773 170 aa11.69□□□□□ -0.54
ZEB1-206ENST00000488625 KINO60870 393 aaKnown RBP11.68□□□□□ -0.54
ZEB1-206ENST00000488625 EIF4A2Q14240 407 aaKnown RBP11.68□□□□□ -0.54
ZEB1-206ENST00000488625 GDPD2Q9HCC8 539 aa11.68□□□□□ -0.54
ZEB1-206ENST00000488625 AKAP17AQ02040 695 aaKnown RBP11.68□□□□□ -0.54
ZEB1-206ENST00000488625 RALYLQ86SE5 291 aaKnown RBP11.68□□□□□ -0.54
ZEB1-206ENST00000488625 GLRX3O76003 335 aaKnown RBP11.68□□□□□ -0.54
ZEB1-206ENST00000488625 PDE1AP54750 535 aa11.68□□□□□ -0.54
ZEB1-206ENST00000488625 HOOK1Q9UJC3 728 aaKnown RBP11.68□□□□□ -0.54
ZEB1-206ENST00000488625 CCAR2Q8N163 923 aaKnown RBP11.68□□□□□ -0.54
ZEB1-206ENST00000488625 SMC2O95347 1197 aa11.68□□□□□ -0.54
ZEB1-206ENST00000488625 ESYT1Q9BSJ8 1104 aa11.68□□□□□ -0.54
ZEB1-206ENST00000488625 PIK3R4Q99570 1358 aa11.67□□□□□ -0.54
ZEB1-206ENST00000488625 NCBP3Q53F19 620 aaKnown RBP11.67□□□□□ -0.54
ZEB1-206ENST00000488625 RRAGDQ9NQL2 400 aaPredicted RBP11.67□□□□□ -0.54
ZEB1-206ENST00000488625 STRN4Q9NRL3 753 aa11.67□□□□□ -0.54
ZEB1-206ENST00000488625 LIMCH1Q9UPQ0 1083 aa11.67□□□□□ -0.54
ZEB1-206ENST00000488625 E9PCH4 1651 aa11.67□□□□□ -0.54
ZEB1-206ENST00000488625 TTC39AQ5SRH9 613 aa11.67□□□□□ -0.54
ZEB1-206ENST00000488625 SDF4Q9BRK5 362 aa11.67□□□□□ -0.54
ZEB1-206ENST00000488625 USP26Q9BXU7 913 aa11.67□□□□□ -0.54
ZEB1-206ENST00000488625 AMOTL1Q8IY63 956 aa11.67□□□□□ -0.54
ZEB1-206ENST00000488625 CLASP1Q7Z460 1538 aa11.66□□□□□ -0.54
ZEB1-206ENST00000488625 GJB2P29033 226 aa11.66□□□□□ -0.54
ZEB1-206ENST00000488625 MAP3K11Q16584 847 aa11.66□□□□□ -0.54
ZEB1-206ENST00000488625 DNAAF4Q8WXU2 420 aa11.66□□□□□ -0.54
ZEB1-206ENST00000488625 AMOTL2Q9Y2J4 779 aa11.66□□□□□ -0.54
ZEB1-206ENST00000488625 OLFM4Q6UX06 510 aa11.66□□□□□ -0.54
ZEB1-206ENST00000488625 DDX54Q8TDD1 881 aaKnown RBP11.66□□□□□ -0.54
ZEB1-206ENST00000488625 KRT24Q2M2I5 525 aa11.66□□□□□ -0.54
ZEB1-206ENST00000488625 HSP90AB2PQ58FF8 381 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms