RNA–Protein interactions for RNA: ENST00000488428.1

TRAF5-206, Transcript of TNF receptor associated factor 5, humanhuman

TSL 5

Gene TRAF5, Length 905 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5-206ENST00000488428 NPC1L1Q9UHC9 1359 aa23.09■■□□□ 1.29
TRAF5-206ENST00000488428 DIAPH1O60610 1272 aaKnown RBP23.08■■□□□ 1.29
TRAF5-206ENST00000488428 POLD1P28340 1107 aa23.08■■□□□ 1.29
TRAF5-206ENST00000488428 ATP6V1AP38606 617 aa23.08■■□□□ 1.29
TRAF5-206ENST00000488428 DCAF8L1A6NGE4 600 aa23.07■■□□□ 1.28
TRAF5-206ENST00000488428 PHF14O94880 888 aa23.07■■□□□ 1.28
TRAF5-206ENST00000488428 CABP4P57796 275 aa23.07■■□□□ 1.28
TRAF5-206ENST00000488428 UBR3Q6ZT12 1888 aa23.07■■□□□ 1.28
TRAF5-206ENST00000488428 RBM42Q9BTD8 480 aaKnown RBP23.05■■□□□ 1.28
TRAF5-206ENST00000488428 SLC4A9Q96Q91 983 aa23.04■■□□□ 1.28
TRAF5-206ENST00000488428 COL3A1P02461 1466 aaPredicted RBP23.04■■□□□ 1.28
TRAF5-206ENST00000488428 NFATC2IPQ8NCF5 419 aa23.03■■□□□ 1.28
TRAF5-206ENST00000488428 SCN11AQ9UI33 1791 aa23.02■■□□□ 1.28
TRAF5-206ENST00000488428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.02■■□□□ 1.28
TRAF5-206ENST00000488428 U2SURPO15042 1029 aaKnown RBP23.02■■□□□ 1.28
TRAF5-206ENST00000488428 HMGB2P26583 209 aaKnown RBP23.02■■□□□ 1.28
TRAF5-206ENST00000488428 FLAD1Q8NFF5 587 aa23.02■■□□□ 1.28
TRAF5-206ENST00000488428 GNPATO15228 680 aa23.01■■□□□ 1.27
TRAF5-206ENST00000488428 LGR6Q9HBX8 967 aa23.01■■□□□ 1.27
TRAF5-206ENST00000488428 MTHFSDQ2M296 383 aaKnown RBP23■■□□□ 1.27
TRAF5-206ENST00000488428 AKAP4Q5JQC9 854 aa23■■□□□ 1.27
TRAF5-206ENST00000488428 VIRMAQ69YN4 1812 aaKnown RBP23■■□□□ 1.27
TRAF5-206ENST00000488428 MAP3K5Q99683 1374 aa23■■□□□ 1.27
TRAF5-206ENST00000488428 PTCD1O75127 700 aaKnown RBP22.99■■□□□ 1.27
TRAF5-206ENST00000488428 YY1P25490 414 aa22.99■■□□□ 1.27
TRAF5-206ENST00000488428 NLGN2Q8NFZ4 835 aa22.99■■□□□ 1.27
TRAF5-206ENST00000488428 SSFA2P28290 1259 aa22.97■■□□□ 1.27
TRAF5-206ENST00000488428 RNMTO43148 476 aaKnown RBP22.96■■□□□ 1.27
TRAF5-206ENST00000488428 COL5A3P25940 1745 aaPredicted RBP22.95■■□□□ 1.26
TRAF5-206ENST00000488428 MYH14Q7Z406 1995 aaKnown RBP22.94■■□□□ 1.26
TRAF5-206ENST00000488428 ZNF831Q5JPB2 1677 aa22.94■■□□□ 1.26
TRAF5-206ENST00000488428 PPP2R1AP30153 589 aa22.94■■□□□ 1.26
TRAF5-206ENST00000488428 PELP1Q8IZL8 1130 aaKnown RBP22.94■■□□□ 1.26
TRAF5-206ENST00000488428 SLC52A2Q9HAB3 445 aa22.94■■□□□ 1.26
TRAF5-206ENST00000488428 GPR162Q16538 588 aa22.93■■□□□ 1.26
TRAF5-206ENST00000488428 SLC39A6Q13433 755 aa22.92■■□□□ 1.26
TRAF5-206ENST00000488428 CFAP53Q96M91 514 aa22.92■■□□□ 1.26
TRAF5-206ENST00000488428 RTCBQ9Y3I0 505 aaKnown RBP22.92■■□□□ 1.26
TRAF5-206ENST00000488428 UTRNP46939 3433 aa22.91■■□□□ 1.26
TRAF5-206ENST00000488428 TRAPPC3LQ5T215 181 aa22.9■■□□□ 1.26
TRAF5-206ENST00000488428 RC3H1Q5TC82 1133 aaKnown RBP22.9■■□□□ 1.26
TRAF5-206ENST00000488428 TJP1Q07157 1748 aa22.9■■□□□ 1.26
TRAF5-206ENST00000488428 CNTNAP4Q9C0A0 1308 aa22.89■■□□□ 1.26
TRAF5-206ENST00000488428 ARHGEF1Q92888 912 aaKnown RBP22.89■■□□□ 1.25
TRAF5-206ENST00000488428 MRC1P22897 1456 aa22.89■■□□□ 1.25
TRAF5-206ENST00000488428 ADAMTS7Q9UKP4 1686 aa22.89■■□□□ 1.25
TRAF5-206ENST00000488428 RPS6KA4O75676 772 aa22.88■■□□□ 1.25
TRAF5-206ENST00000488428 PRKAR2BP31323 418 aa22.88■■□□□ 1.25
TRAF5-206ENST00000488428 CRKLP46109 303 aaKnown RBP22.88■■□□□ 1.25
TRAF5-206ENST00000488428 PHACTR3Q96KR7 559 aa22.88■■□□□ 1.25
TRAF5-206ENST00000488428 DNAJC10Q8IXB1 793 aa22.87■■□□□ 1.25
TRAF5-206ENST00000488428 RSPH6AQ9H0K4 717 aa22.87■■□□□ 1.25
TRAF5-206ENST00000488428 CHD4Q14839 1912 aa22.86■■□□□ 1.25
TRAF5-206ENST00000488428 U2AF1L5P0DN76 240 aaPredicted RBP22.85■■□□□ 1.25
TRAF5-206ENST00000488428 U2AF1Q01081 240 aaKnown RBP eCLIP22.85■■□□□ 1.25
TRAF5-206ENST00000488428 IL17REQ8NFR9 667 aa22.85■■□□□ 1.25
TRAF5-206ENST00000488428 GAS2L2Q8NHY3 880 aa22.85■■□□□ 1.25
TRAF5-206ENST00000488428 NUDCQ9Y266 331 aa22.85■■□□□ 1.25
TRAF5-206ENST00000488428 CD2APQ9Y5K6 639 aa22.85■■□□□ 1.25
TRAF5-206ENST00000488428 C4AP0C0L4 1744 aa22.85■■□□□ 1.25
TRAF5-206ENST00000488428 GNAT3A8MTJ3 354 aa22.84■■□□□ 1.25
TRAF5-206ENST00000488428 MMP10P09238 476 aa22.84■■□□□ 1.25
TRAF5-206ENST00000488428 YBX3P16989 372 aaKnown RBP eCLIP22.84■■□□□ 1.25
TRAF5-206ENST00000488428 RFC4P35249 363 aa22.84■■□□□ 1.25
TRAF5-206ENST00000488428 KCPQ6ZWJ8 1503 aa22.83■■□□□ 1.25
TRAF5-206ENST00000488428 INTS5Q6P9B9 1019 aaKnown RBP22.83■■□□□ 1.25
TRAF5-206ENST00000488428 WWC3Q9ULE0 1092 aa22.83■■□□□ 1.25
TRAF5-206ENST00000488428 GOLGB1Q14789 3259 aaKnown RBP22.83■■□□□ 1.24
TRAF5-206ENST00000488428 ADRA2BP18089 450 aa22.82■■□□□ 1.24
TRAF5-206ENST00000488428 SRP68Q9UHB9 627 aaKnown RBP22.82■■□□□ 1.24
TRAF5-206ENST00000488428 CICQ96RK0 1608 aaPredicted RBP22.82■■□□□ 1.24
TRAF5-206ENST00000488428 GYS1P13807 737 aa22.81■■□□□ 1.24
TRAF5-206ENST00000488428 TEFQ10587 303 aa22.8■■□□□ 1.24
TRAF5-206ENST00000488428 CCDC87Q9NVE4 849 aa22.8■■□□□ 1.24
TRAF5-206ENST00000488428 SIPA1L3O60292 1781 aaPredicted RBP22.79■■□□□ 1.24
TRAF5-206ENST00000488428 UBR2Q8IWV8 1755 aa22.79■■□□□ 1.24
TRAF5-206ENST00000488428 CYP19A1P11511 503 aaPredicted RBP22.79■■□□□ 1.24
TRAF5-206ENST00000488428 NLGN1Q8N2Q7 840 aa22.79■■□□□ 1.24
TRAF5-206ENST00000488428 FCHSD2O94868 740 aa22.77■■□□□ 1.24
TRAF5-206ENST00000488428 TTC5Q8N0Z6 440 aa22.77■■□□□ 1.24
TRAF5-206ENST00000488428 DDX10Q13206 875 aaKnown RBP22.76■■□□□ 1.23
TRAF5-206ENST00000488428 ZNF784Q8NCA9 323 aaPredicted RBP22.76■■□□□ 1.23
TRAF5-206ENST00000488428 ZNF496Q96IT1 587 aaPredicted RBP22.76■■□□□ 1.23
TRAF5-206ENST00000488428 ZBTB1Q9Y2K1 713 aa22.76■■□□□ 1.23
TRAF5-206ENST00000488428 KCNQ3O43525 872 aa22.75■■□□□ 1.23
TRAF5-206ENST00000488428 FKBP8Q14318 412 aa22.75■■□□□ 1.23
TRAF5-206ENST00000488428 SOS1Q07889 1333 aaPredicted RBP22.75■■□□□ 1.23
TRAF5-206ENST00000488428 USP42Q9H9J4 1324 aaKnown RBP22.75■■□□□ 1.23
TRAF5-206ENST00000488428 CEMIPQ8WUJ3 1361 aa22.75■■□□□ 1.23
TRAF5-206ENST00000488428 ZNF790Q6PG37 636 aa22.74■■□□□ 1.23
TRAF5-206ENST00000488428 MCM10Q7L590 875 aa22.74■■□□□ 1.23
TRAF5-206ENST00000488428 VSIG10Q8N0Z9 540 aa22.74■■□□□ 1.23
TRAF5-206ENST00000488428 PARP3Q9Y6F1 533 aa22.74■■□□□ 1.23
TRAF5-206ENST00000488428 GRIN3BO60391 1043 aa22.73■■□□□ 1.23
TRAF5-206ENST00000488428 CANXP27824 592 aaKnown RBP22.73■■□□□ 1.23
TRAF5-206ENST00000488428 DCTN1Q14203 1278 aa22.73■■□□□ 1.23
TRAF5-206ENST00000488428 N4BP2Q86UW6 1770 aaPredicted RBP22.73■■□□□ 1.23
TRAF5-206ENST00000488428 KIF13BQ9NQT8 1826 aa22.72■■□□□ 1.23
TRAF5-206ENST00000488428 BTBD11A6QL63 1104 aa22.71■■□□□ 1.23
TRAF5-206ENST00000488428 USPL1Q5W0Q7 1092 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms