RNA–Protein interactions for RNA: ENST00000488203.1

CIT-205, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 2

Gene CIT, Length 2,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-205ENST00000488203 ALS2Q96Q42 1657 aa12.08□□□□□ -0.48
CIT-205ENST00000488203 NCOA3Q9Y6Q9 1424 aa12.08□□□□□ -0.48
CIT-205ENST00000488203 PHRF1Q9P1Y6 1649 aaKnown RBP12.08□□□□□ -0.48
CIT-205ENST00000488203 TEFQ10587 303 aa12.08□□□□□ -0.48
CIT-205ENST00000488203 FLIIQ13045 1269 aa12.08□□□□□ -0.48
CIT-205ENST00000488203 C1orf141Q5JVX7 400 aa12.08□□□□□ -0.48
CIT-205ENST00000488203 BTBD11A6QL63 1104 aa12.07□□□□□ -0.48
CIT-205ENST00000488203 RNMTO43148 476 aaKnown RBP12.07□□□□□ -0.48
CIT-205ENST00000488203 EIF4A1P60842 406 aaKnown RBP12.07□□□□□ -0.48
CIT-205ENST00000488203 FKBP5Q13451 457 aaPredicted RBP12.07□□□□□ -0.48
CIT-205ENST00000488203 AMOTQ4VCS5 1084 aa12.07□□□□□ -0.48
CIT-205ENST00000488203 HDGFL1Q5TGJ6 251 aa12.07□□□□□ -0.48
CIT-205ENST00000488203 SPATA31A3Q5VYP0 1347 aa12.07□□□□□ -0.48
CIT-205ENST00000488203 CSB-PGBD3P0DP91 1061 aa12.07□□□□□ -0.48
CIT-205ENST00000488203 PHAXQ9H814 394 aaKnown RBP12.07□□□□□ -0.48
CIT-205ENST00000488203 STRCQ7RTU9 1775 aa12.06□□□□□ -0.48
CIT-205ENST00000488203 GCC1Q96CN9 775 aa12.06□□□□□ -0.48
CIT-205ENST00000488203 BABAM1Q9NWV8 329 aa12.06□□□□□ -0.48
CIT-205ENST00000488203 TNS3Q68CZ2 1445 aa12.06□□□□□ -0.48
CIT-205ENST00000488203 RGPD5Q99666 1765 aa12.06□□□□□ -0.48
CIT-205ENST00000488203 DDRGK1Q96HY6 314 aa12.06□□□□□ -0.48
CIT-205ENST00000488203 SLAIN2Q9P270 581 aa12.06□□□□□ -0.48
CIT-205ENST00000488203 NCAPD2Q15021 1401 aa12.05□□□□□ -0.48
CIT-205ENST00000488203 ANXA1P04083 346 aa12.05□□□□□ -0.48
CIT-205ENST00000488203 CEP85Q6P2H3 762 aa12.05□□□□□ -0.48
CIT-205ENST00000488203 ANKRD44Q8N8A2 993 aa12.05□□□□□ -0.48
CIT-205ENST00000488203 APBB1O00213 710 aa12.04□□□□□ -0.48
CIT-205ENST00000488203 FAM43AQ8N2R8 423 aa12.04□□□□□ -0.48
CIT-205ENST00000488203 RAPGEF4Q8WZA2 1011 aa12.04□□□□□ -0.48
CIT-205ENST00000488203 XIRP1Q702N8 1843 aaKnown RBP12.04□□□□□ -0.48
CIT-205ENST00000488203 ATP10DQ9P241 1426 aa12.04□□□□□ -0.48
CIT-205ENST00000488203 PRAMEF22A3QJZ6 481 aa12.04□□□□□ -0.48
CIT-205ENST00000488203 CCT4P50991 539 aaKnown RBP12.04□□□□□ -0.48
CIT-205ENST00000488203 C16orf71Q8IYS4 520 aaPredicted RBP12.04□□□□□ -0.48
CIT-205ENST00000488203 CHPF2Q9P2E5 772 aa12.04□□□□□ -0.48
CIT-205ENST00000488203 PKNOX2Q96KN3 472 aa12.03□□□□□ -0.48
CIT-205ENST00000488203 DCTPP1Q9H773 170 aa12.03□□□□□ -0.48
CIT-205ENST00000488203 SMARCA5O60264 1052 aaPredicted RBP12.02□□□□□ -0.49
CIT-205ENST00000488203 TATP17735 454 aaPredicted RBP12.02□□□□□ -0.49
CIT-205ENST00000488203 RPAP2Q8IXW5 612 aaPredicted RBP12.02□□□□□ -0.49
CIT-205ENST00000488203 LMO7Q8WWI1 1683 aa12.01□□□□□ -0.49
CIT-205ENST00000488203 MFAP1P55081 439 aaKnown RBP12.01□□□□□ -0.49
CIT-205ENST00000488203 SLC39A6Q13433 755 aa12.01□□□□□ -0.49
CIT-205ENST00000488203 NFKBIBQ15653 356 aa12.01□□□□□ -0.49
CIT-205ENST00000488203 OTUD7AQ8TE49 926 aaPredicted RBP12.01□□□□□ -0.49
CIT-205ENST00000488203 MEGF6O75095 1541 aa12.01□□□□□ -0.49
CIT-205ENST00000488203 SOS1Q07889 1333 aaPredicted RBP12□□□□□ -0.49
CIT-205ENST00000488203 FAM208AQ9UK61 1670 aaKnown RBP12□□□□□ -0.49
CIT-205ENST00000488203 CAMTA1Q9Y6Y1 1673 aa12□□□□□ -0.49
CIT-205ENST00000488203 GNAI2P04899 355 aa12□□□□□ -0.49
CIT-205ENST00000488203 PHKG2P15735 406 aa12□□□□□ -0.49
CIT-205ENST00000488203 PROSER3Q2NL68 480 aa12□□□□□ -0.49
CIT-205ENST00000488203 NFATC2IPQ8NCF5 419 aa12□□□□□ -0.49
CIT-205ENST00000488203 COL18A1P39060 1754 aa12□□□□□ -0.49
CIT-205ENST00000488203 GIGYF1O75420 1035 aaPredicted RBP11.99□□□□□ -0.49
CIT-205ENST00000488203 TBC1D32Q96NH3 1257 aa11.99□□□□□ -0.49
CIT-205ENST00000488203 PRDM11Q9NQV5 511 aa11.99□□□□□ -0.49
CIT-205ENST00000488203 DAXXQ9UER7 740 aaPredicted RBP11.99□□□□□ -0.49
CIT-205ENST00000488203 SPG7Q9UQ90 795 aa11.99□□□□□ -0.49
CIT-205ENST00000488203 VIRMAQ69YN4 1812 aaKnown RBP11.99□□□□□ -0.49
CIT-205ENST00000488203 SOS2Q07890 1332 aaPredicted RBP11.99□□□□□ -0.49
CIT-205ENST00000488203 USP44Q9H0E7 712 aa11.99□□□□□ -0.49
CIT-205ENST00000488203 UPF2Q9HAU5 1272 aaKnown RBP11.99□□□□□ -0.49
CIT-205ENST00000488203 LRRFIP2Q9Y608 721 aaKnown RBP11.99□□□□□ -0.49
CIT-205ENST00000488203 PI4KAP2A4QPH2 592 aa11.98□□□□□ -0.49
CIT-205ENST00000488203 CYP27B1O15528 508 aa11.98□□□□□ -0.49
CIT-205ENST00000488203 PLEKHM2Q8IWE5 1019 aa11.98□□□□□ -0.49
CIT-205ENST00000488203 PI4KAP1Q8N8J0 262 aa11.98□□□□□ -0.49
CIT-205ENST00000488203 KDM6AO15550 1401 aaPredicted RBP11.98□□□□□ -0.49
CIT-205ENST00000488203 PNMA6EA0A0J9YXQ4 647 aa11.98□□□□□ -0.49
CIT-205ENST00000488203 HOXB7P09629 217 aa11.98□□□□□ -0.49
CIT-205ENST00000488203 GLIPR1L2Q4G1C9 344 aa11.98□□□□□ -0.49
CIT-205ENST00000488203 BMP2KLQ5H9B9 411 aa11.98□□□□□ -0.49
CIT-205ENST00000488203 KDM3BQ7LBC6 1761 aa11.98□□□□□ -0.49
CIT-205ENST00000488203 CPDO75976 1380 aa11.97□□□□□ -0.49
CIT-205ENST00000488203 SLC52A2Q9HAB3 445 aa11.97□□□□□ -0.49
CIT-205ENST00000488203 EXOC6BQ9Y2D4 811 aa11.97□□□□□ -0.49
CIT-205ENST00000488203 GNAI3P08754 354 aa11.97□□□□□ -0.49
CIT-205ENST00000488203 GSPT1P15170 499 aaKnown RBP11.97□□□□□ -0.49
CIT-205ENST00000488203 TOM1L2Q6ZVM7 507 aa11.97□□□□□ -0.49
CIT-205ENST00000488203 IFNL2Q8IZJ0 200 aa11.97□□□□□ -0.49
CIT-205ENST00000488203 ZNF790Q6PG37 636 aa11.96□□□□□ -0.49
CIT-205ENST00000488203 C22orf23Q9BZE7 217 aa11.96□□□□□ -0.49
CIT-205ENST00000488203 SRCIN1Q9C0H9 1055 aa11.96□□□□□ -0.49
CIT-205ENST00000488203 STRN4Q9NRL3 753 aa11.96□□□□□ -0.49
CIT-205ENST00000488203 DBF4Q9UBU7 674 aaPredicted RBP11.96□□□□□ -0.49
CIT-205ENST00000488203 CRYBG1Q9Y4K1 1723 aa11.95□□□□□ -0.5
CIT-205ENST00000488203 OVOS2A0A0G2JMS6 1433 aa11.95□□□□□ -0.5
CIT-205ENST00000488203 HMMRO75330 724 aa11.95□□□□□ -0.5
CIT-205ENST00000488203 UBTFL1P0CB47 393 aaPredicted RBP11.95□□□□□ -0.5
CIT-205ENST00000488203 DNAAF4Q8WXU2 420 aa11.95□□□□□ -0.5
CIT-205ENST00000488203 HEG1Q9ULI3 1381 aa11.95□□□□□ -0.5
CIT-205ENST00000488203 NBPF7P0C2Y1 421 aaPredicted RBP11.95□□□□□ -0.5
CIT-205ENST00000488203 AIMP1Q12904 312 aaKnown RBP11.95□□□□□ -0.5
CIT-205ENST00000488203 BEND3Q5T5X7 828 aa11.95□□□□□ -0.5
CIT-205ENST00000488203 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.95□□□□□ -0.54e-6■■■■■ 27.4
CIT-205ENST00000488203 ADCY9O60503 1353 aa11.95□□□□□ -0.5
CIT-205ENST00000488203 ATP8B2P98198 1209 aa11.94□□□□□ -0.5
CIT-205ENST00000488203 TBC1D9Q6ZT07 1266 aa11.94□□□□□ -0.5
CIT-205ENST00000488203 MAP3K2Q9Y2U5 619 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms