RNA–Protein interactions for RNA: ENST00000488179.6

SSR2-212, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-212ENST00000488179 ATG3Q9NT62 314 aa11.25□□□□□ -0.61
SSR2-212ENST00000488179 C4BP0C0L5 1744 aa11.24□□□□□ -0.61
SSR2-212ENST00000488179 ERVV-2B6SEH9 535 aa11.24□□□□□ -0.61
SSR2-212ENST00000488179 PTCD1O75127 700 aaKnown RBP11.24□□□□□ -0.61
SSR2-212ENST00000488179 HMGB2P26583 209 aaKnown RBP11.24□□□□□ -0.61
SSR2-212ENST00000488179 NFATC2IPQ8NCF5 419 aa11.24□□□□□ -0.61
SSR2-212ENST00000488179 SGIP1Q9BQI5 828 aa11.24□□□□□ -0.61
SSR2-212ENST00000488179 VIRMAQ69YN4 1812 aaKnown RBP11.24□□□□□ -0.61
SSR2-212ENST00000488179 LINC00116Q8NCU8 138 aa11.23□□□□□ -0.61
SSR2-212ENST00000488179 GNPATO15228 680 aa11.23□□□□□ -0.61
SSR2-212ENST00000488179 ITPK1Q13572 414 aa11.23□□□□□ -0.61
SSR2-212ENST00000488179 FLAD1Q8NFF5 587 aa11.23□□□□□ -0.61
SSR2-212ENST00000488179 KDM6AO15550 1401 aaPredicted RBP11.22□□□□□ -0.61
SSR2-212ENST00000488179 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.22□□□□□ -0.61
SSR2-212ENST00000488179 YY1P25490 414 aa11.22□□□□□ -0.61
SSR2-212ENST00000488179 ZEB1P37275 1124 aaPredicted RBP11.22□□□□□ -0.61
SSR2-212ENST00000488179 AMIGO3Q86WK7 504 aa11.22□□□□□ -0.61
SSR2-212ENST00000488179 CFAP53Q96M91 514 aa11.22□□□□□ -0.61
SSR2-212ENST00000488179 KDRP35968 1356 aa11.22□□□□□ -0.61
SSR2-212ENST00000488179 UBR3Q6ZT12 1888 aa11.22□□□□□ -0.61
SSR2-212ENST00000488179 SCN11AQ9UI33 1791 aa11.21□□□□□ -0.61
SSR2-212ENST00000488179 AKAP4Q5JQC9 854 aa11.21□□□□□ -0.61
SSR2-212ENST00000488179 LGR6Q9HBX8 967 aa11.21□□□□□ -0.61
SSR2-212ENST00000488179 GPR162Q16538 588 aa11.21□□□□□ -0.62
SSR2-212ENST00000488179 MTHFSDQ2M296 383 aaKnown RBP11.21□□□□□ -0.62
SSR2-212ENST00000488179 PLEKHG2Q9H7P9 1386 aa11.2□□□□□ -0.62
SSR2-212ENST00000488179 NPC1L1Q9UHC9 1359 aa11.2□□□□□ -0.62
SSR2-212ENST00000488179 SLC4A9Q96Q91 983 aa11.19□□□□□ -0.62
SSR2-212ENST00000488179 RTCBQ9Y3I0 505 aaKnown RBP11.19□□□□□ -0.62
SSR2-212ENST00000488179 U2AF1L5P0DN76 240 aaPredicted RBP11.18□□□□□ -0.62
SSR2-212ENST00000488179 SSFA2P28290 1259 aa11.18□□□□□ -0.62
SSR2-212ENST00000488179 U2AF1Q01081 240 aaKnown RBP eCLIP11.18□□□□□ -0.62
SSR2-212ENST00000488179 SLC39A6Q13433 755 aa11.18□□□□□ -0.62
SSR2-212ENST00000488179 TRAPPC3LQ5T215 181 aa11.18□□□□□ -0.62
SSR2-212ENST00000488179 NLGN2Q8NFZ4 835 aa11.18□□□□□ -0.62
SSR2-212ENST00000488179 WWC3Q9ULE0 1092 aa11.18□□□□□ -0.62
SSR2-212ENST00000488179 NUDCQ9Y266 331 aa11.18□□□□□ -0.62
SSR2-212ENST00000488179 MYH14Q7Z406 1995 aaKnown RBP11.18□□□□□ -0.62
SSR2-212ENST00000488179 CHD4Q14839 1912 aa11.18□□□□□ -0.62
SSR2-212ENST00000488179 RNMTO43148 476 aaKnown RBP11.18□□□□□ -0.62
SSR2-212ENST00000488179 PPP2R1AP30153 589 aa11.18□□□□□ -0.62
SSR2-212ENST00000488179 SLC52A2Q9HAB3 445 aa11.18□□□□□ -0.62
SSR2-212ENST00000488179 RFC4P35249 363 aa11.17□□□□□ -0.62
SSR2-212ENST00000488179 PRKAR2BP31323 418 aa11.16□□□□□ -0.62
SSR2-212ENST00000488179 TEFQ10587 303 aa11.16□□□□□ -0.62
SSR2-212ENST00000488179 COL24A1Q17RW2 1714 aa11.16□□□□□ -0.62
SSR2-212ENST00000488179 COL3A1P02461 1466 aaPredicted RBP11.16□□□□□ -0.62
SSR2-212ENST00000488179 GNAT3A8MTJ3 354 aa11.15□□□□□ -0.62
SSR2-212ENST00000488179 GAS2L2Q8NHY3 880 aa11.15□□□□□ -0.62
SSR2-212ENST00000488179 COL5A3P25940 1745 aaPredicted RBP11.15□□□□□ -0.62
SSR2-212ENST00000488179 CRKLP46109 303 aaKnown RBP11.15□□□□□ -0.63
SSR2-212ENST00000488179 DDX10Q13206 875 aaKnown RBP11.15□□□□□ -0.63
SSR2-212ENST00000488179 TTC5Q8N0Z6 440 aa11.15□□□□□ -0.63
SSR2-212ENST00000488179 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.63
SSR2-212ENST00000488179 PHACTR3Q96KR7 559 aa11.15□□□□□ -0.63
SSR2-212ENST00000488179 MMP10P09238 476 aa11.14□□□□□ -0.63
SSR2-212ENST00000488179 DNAJC10Q8IXB1 793 aa11.14□□□□□ -0.63
SSR2-212ENST00000488179 MAP3K5Q99683 1374 aa11.14□□□□□ -0.63
SSR2-212ENST00000488179 RPS6KA4O75676 772 aa11.13□□□□□ -0.63
SSR2-212ENST00000488179 NEFMP07197 916 aa11.13□□□□□ -0.63
SSR2-212ENST00000488179 RC3H1Q5TC82 1133 aaKnown RBP11.13□□□□□ -0.63
SSR2-212ENST00000488179 RSPH6AQ9H0K4 717 aa11.13□□□□□ -0.63
SSR2-212ENST00000488179 RTF1Q92541 710 aaKnown RBP11.12□□□□□ -0.63
SSR2-212ENST00000488179 ZNF330Q9Y3S2 320 aaPredicted RBP11.12□□□□□ -0.63
SSR2-212ENST00000488179 CNTNAP4Q9C0A0 1308 aa11.12□□□□□ -0.63
SSR2-212ENST00000488179 ZNF831Q5JPB2 1677 aa11.12□□□□□ -0.63
SSR2-212ENST00000488179 NLGN1Q8N2Q7 840 aa11.12□□□□□ -0.63
SSR2-212ENST00000488179 IL17REQ8NFR9 667 aa11.12□□□□□ -0.63
SSR2-212ENST00000488179 SRP68Q9UHB9 627 aaKnown RBP11.12□□□□□ -0.63
SSR2-212ENST00000488179 CD2APQ9Y5K6 639 aa11.12□□□□□ -0.63
SSR2-212ENST00000488179 TJP1Q07157 1748 aa11.11□□□□□ -0.63
SSR2-212ENST00000488179 ZPR1O75312 459 aa11.11□□□□□ -0.63
SSR2-212ENST00000488179 ADRA2BP18089 450 aa11.11□□□□□ -0.63
SSR2-212ENST00000488179 CCDC87Q9NVE4 849 aa11.11□□□□□ -0.63
SSR2-212ENST00000488179 C4AP0C0L4 1744 aa11.11□□□□□ -0.63
SSR2-212ENST00000488179 FCHSD2O94868 740 aa11.1□□□□□ -0.63
SSR2-212ENST00000488179 GYS1P13807 737 aa11.1□□□□□ -0.63
SSR2-212ENST00000488179 YBX3P16989 372 aaKnown RBP eCLIP11.1□□□□□ -0.635e-9■■□□□ 13.9
SSR2-212ENST00000488179 CANXP27824 592 aaKnown RBP11.1□□□□□ -0.63
SSR2-212ENST00000488179 DCTN1Q14203 1278 aa11.1□□□□□ -0.63
SSR2-212ENST00000488179 MCM10Q7L590 875 aa11.1□□□□□ -0.63
SSR2-212ENST00000488179 PARP3Q9Y6F1 533 aa11.1□□□□□ -0.63
SSR2-212ENST00000488179 BTBD11A6QL63 1104 aa11.09□□□□□ -0.63
SSR2-212ENST00000488179 INTS5Q6P9B9 1019 aaKnown RBP11.09□□□□□ -0.63
SSR2-212ENST00000488179 ZNF790Q6PG37 636 aa11.09□□□□□ -0.63
SSR2-212ENST00000488179 ZNF496Q96IT1 587 aaPredicted RBP11.09□□□□□ -0.63
SSR2-212ENST00000488179 MRC1P22897 1456 aa11.09□□□□□ -0.63
SSR2-212ENST00000488179 STARD3NLO95772 234 aa11.09□□□□□ -0.63
SSR2-212ENST00000488179 CYP19A1P11511 503 aaPredicted RBP11.09□□□□□ -0.63
SSR2-212ENST00000488179 NPM2Q86SE8 214 aaKnown RBP11.09□□□□□ -0.63
SSR2-212ENST00000488179 ZBTB1Q9Y2K1 713 aa11.09□□□□□ -0.63
SSR2-212ENST00000488179 N4BP2Q86UW6 1770 aaPredicted RBP11.09□□□□□ -0.63
SSR2-212ENST00000488179 CICQ96RK0 1608 aaPredicted RBP11.08□□□□□ -0.64
SSR2-212ENST00000488179 GRIN3BO60391 1043 aa11.08□□□□□ -0.64
SSR2-212ENST00000488179 FKBP8Q14318 412 aa11.08□□□□□ -0.64
SSR2-212ENST00000488179 DLG5Q8TDM6 1919 aa11.08□□□□□ -0.64
SSR2-212ENST00000488179 ADAMTS7Q9UKP4 1686 aa11.08□□□□□ -0.64
SSR2-212ENST00000488179 USP42Q9H9J4 1324 aaKnown RBP11.07□□□□□ -0.64
SSR2-212ENST00000488179 KCPQ6ZWJ8 1503 aa11.07□□□□□ -0.64
SSR2-212ENST00000488179 A0A0G2JLW4 131 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms