RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 LINC00116Q8NCU8 138 aa15.36■□□□□ 0.05
NIPAL3-207ENST00000488155 UTRNP46939 3433 aa15.35■□□□□ 0.05
NIPAL3-207ENST00000488155 ITPK1Q13572 414 aa15.35■□□□□ 0.05
NIPAL3-207ENST00000488155 C1orf141Q5JVX7 400 aa15.35■□□□□ 0.05
NIPAL3-207ENST00000488155 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
NIPAL3-207ENST00000488155 KDM6AO15550 1401 aaPredicted RBP15.34■□□□□ 0.05
NIPAL3-207ENST00000488155 HSP90AB1P08238 724 aaKnown RBP15.34■□□□□ 0.05
NIPAL3-207ENST00000488155 HMOX1P09601 288 aa15.34■□□□□ 0.05
NIPAL3-207ENST00000488155 AMOTQ4VCS5 1084 aa15.34■□□□□ 0.05
NIPAL3-207ENST00000488155 NLGN2Q8NFZ4 835 aa15.34■□□□□ 0.05
NIPAL3-207ENST00000488155 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.33■□□□□ 0.04
NIPAL3-207ENST00000488155 ERVV-2B6SEH9 535 aa15.33■□□□□ 0.04
NIPAL3-207ENST00000488155 CABP4P57796 275 aa15.33■□□□□ 0.04
NIPAL3-207ENST00000488155 GPR162Q16538 588 aa15.33■□□□□ 0.04
NIPAL3-207ENST00000488155 FLAD1Q8NFF5 587 aa15.33■□□□□ 0.04
NIPAL3-207ENST00000488155 DCAF5Q96JK2 942 aa15.33■□□□□ 0.04
NIPAL3-207ENST00000488155 COL5A3P25940 1745 aaPredicted RBP15.32■□□□□ 0.04
NIPAL3-207ENST00000488155 GNPATO15228 680 aa15.32■□□□□ 0.04
NIPAL3-207ENST00000488155 MAP3K5Q99683 1374 aa15.32■□□□□ 0.04
NIPAL3-207ENST00000488155 HMGB2P26583 209 aaKnown RBP15.31■□□□□ 0.04
NIPAL3-207ENST00000488155 SLC4A9Q96Q91 983 aa15.31■□□□□ 0.04
NIPAL3-207ENST00000488155 KDRP35968 1356 aa15.31■□□□□ 0.04
NIPAL3-207ENST00000488155 DIAPH1O60610 1272 aaKnown RBP15.3■□□□□ 0.04
NIPAL3-207ENST00000488155 NFATC2IPQ8NCF5 419 aa15.3■□□□□ 0.04
NIPAL3-207ENST00000488155 PLEKHG2Q9H7P9 1386 aa15.3■□□□□ 0.04
NIPAL3-207ENST00000488155 PTCD1O75127 700 aaKnown RBP15.29■□□□□ 0.04
NIPAL3-207ENST00000488155 SSFA2P28290 1259 aa15.28■□□□□ 0.04
NIPAL3-207ENST00000488155 ZNF831Q5JPB2 1677 aa15.28■□□□□ 0.04
NIPAL3-207ENST00000488155 GOLGB1Q14789 3259 aaKnown RBP15.27■□□□□ 0.04
NIPAL3-207ENST00000488155 U2SURPO15042 1029 aaKnown RBP15.27■□□□□ 0.04
NIPAL3-207ENST00000488155 AKAP4Q5JQC9 854 aa15.27■□□□□ 0.04
NIPAL3-207ENST00000488155 LGR6Q9HBX8 967 aa15.27■□□□□ 0.04
NIPAL3-207ENST00000488155 WWC3Q9ULE0 1092 aa15.27■□□□□ 0.04
NIPAL3-207ENST00000488155 TJP1Q07157 1748 aa15.26■□□□□ 0.03
NIPAL3-207ENST00000488155 MTHFSDQ2M296 383 aaKnown RBP15.26■□□□□ 0.03
NIPAL3-207ENST00000488155 C4AP0C0L4 1744 aa15.26■□□□□ 0.03
NIPAL3-207ENST00000488155 RTCBQ9Y3I0 505 aaKnown RBP15.25■□□□□ 0.03
NIPAL3-207ENST00000488155 NPC1L1Q9UHC9 1359 aa15.24■□□□□ 0.03
NIPAL3-207ENST00000488155 N4BP2Q86UW6 1770 aaPredicted RBP15.24■□□□□ 0.03
NIPAL3-207ENST00000488155 YBX3P16989 372 aaKnown RBP eCLIP15.24■□□□□ 0.032e-6■■■□□ 19.2
NIPAL3-207ENST00000488155 SLC39A6Q13433 755 aa15.24■□□□□ 0.03
NIPAL3-207ENST00000488155 TRAPPC3LQ5T215 181 aa15.24■□□□□ 0.03
NIPAL3-207ENST00000488155 COL3A1P02461 1466 aaPredicted RBP15.24■□□□□ 0.03
NIPAL3-207ENST00000488155 RNMTO43148 476 aaKnown RBP15.23■□□□□ 0.03
NIPAL3-207ENST00000488155 ARHGEF1Q92888 912 aaKnown RBP15.23■□□□□ 0.03
NIPAL3-207ENST00000488155 ZNF784Q8NCA9 323 aaPredicted RBP15.22■□□□□ 0.03
NIPAL3-207ENST00000488155 SLC52A2Q9HAB3 445 aa15.22■□□□□ 0.03
NIPAL3-207ENST00000488155 CD2APQ9Y5K6 639 aa15.22■□□□□ 0.03
NIPAL3-207ENST00000488155 CNTNAP4Q9C0A0 1308 aa15.21■□□□□ 0.03
NIPAL3-207ENST00000488155 RPS6KA4O75676 772 aa15.21■□□□□ 0.03
NIPAL3-207ENST00000488155 MMP10P09238 476 aa15.21■□□□□ 0.03
NIPAL3-207ENST00000488155 RFC4P35249 363 aa15.21■□□□□ 0.03
NIPAL3-207ENST00000488155 RC3H1Q5TC82 1133 aaKnown RBP15.21■□□□□ 0.03
NIPAL3-207ENST00000488155 KIF13BQ9NQT8 1826 aa15.2■□□□□ 0.02
NIPAL3-207ENST00000488155 ADAMTS7Q9UKP4 1686 aa15.2■□□□□ 0.02
NIPAL3-207ENST00000488155 CRKLP46109 303 aaKnown RBP15.2■□□□□ 0.02
NIPAL3-207ENST00000488155 DNAJC10Q8IXB1 793 aa15.2■□□□□ 0.02
NIPAL3-207ENST00000488155 CICQ96RK0 1608 aaPredicted RBP15.19■□□□□ 0.02
NIPAL3-207ENST00000488155 CFAP53Q96M91 514 aa15.19■□□□□ 0.02
NIPAL3-207ENST00000488155 SRP68Q9UHB9 627 aaKnown RBP15.19■□□□□ 0.02
NIPAL3-207ENST00000488155 SIPA1L3O60292 1781 aaPredicted RBP15.19■□□□□ 0.02
NIPAL3-207ENST00000488155 PPP2R1AP30153 589 aa15.18■□□□□ 0.02
NIPAL3-207ENST00000488155 MRC1P22897 1456 aa15.18■□□□□ 0.02
NIPAL3-207ENST00000488155 UBR2Q8IWV8 1755 aa15.18■□□□□ 0.02
NIPAL3-207ENST00000488155 DLG5Q8TDM6 1919 aa15.17■□□□□ 0.02
NIPAL3-207ENST00000488155 GRIN3BO60391 1043 aa15.17■□□□□ 0.02
NIPAL3-207ENST00000488155 GYS1P13807 737 aa15.17■□□□□ 0.02
NIPAL3-207ENST00000488155 ADRA2BP18089 450 aa15.17■□□□□ 0.02
NIPAL3-207ENST00000488155 PRKAR2BP31323 418 aa15.17■□□□□ 0.02
NIPAL3-207ENST00000488155 NLGN1Q8N2Q7 840 aa15.17■□□□□ 0.02
NIPAL3-207ENST00000488155 AFDNP55196 1824 aaKnown RBP15.16■□□□□ 0.02
NIPAL3-207ENST00000488155 INTS5Q6P9B9 1019 aaKnown RBP15.16■□□□□ 0.02
NIPAL3-207ENST00000488155 IL17REQ8NFR9 667 aa15.16■□□□□ 0.02
NIPAL3-207ENST00000488155 GAS2L2Q8NHY3 880 aa15.16■□□□□ 0.02
NIPAL3-207ENST00000488155 PHACTR3Q96KR7 559 aa15.16■□□□□ 0.02
NIPAL3-207ENST00000488155 KIAA1551Q9HCM1 1747 aa15.16■□□□□ 0.02
NIPAL3-207ENST00000488155 KCPQ6ZWJ8 1503 aa15.16■□□□□ 0.02
NIPAL3-207ENST00000488155 BRCA1P38398 1863 aaKnown RBP15.15■□□□□ 0.02
NIPAL3-207ENST00000488155 GNAT3A8MTJ3 354 aa15.15■□□□□ 0.02
NIPAL3-207ENST00000488155 U2AF1L5P0DN76 240 aaPredicted RBP15.15■□□□□ 0.02
NIPAL3-207ENST00000488155 U2AF1Q01081 240 aaKnown RBP eCLIP15.15■□□□□ 0.02
NIPAL3-207ENST00000488155 PARP3Q9Y6F1 533 aa15.15■□□□□ 0.02
NIPAL3-207ENST00000488155 TEFQ10587 303 aa15.14■□□□□ 0.01
NIPAL3-207ENST00000488155 FKBP8Q14318 412 aa15.14■□□□□ 0.01
NIPAL3-207ENST00000488155 RSPH6AQ9H0K4 717 aa15.14■□□□□ 0.01
NIPAL3-207ENST00000488155 CCDC87Q9NVE4 849 aa15.14■□□□□ 0.01
NIPAL3-207ENST00000488155 NUDCQ9Y266 331 aa15.14■□□□□ 0.01
NIPAL3-207ENST00000488155 A0A0G2JLW4 131 aa15.13■□□□□ 0.01
NIPAL3-207ENST00000488155 CYP19A1P11511 503 aaPredicted RBP15.13■□□□□ 0.01
NIPAL3-207ENST00000488155 TTC5Q8N0Z6 440 aa15.13■□□□□ 0.01
NIPAL3-207ENST00000488155 ZBTB1Q9Y2K1 713 aa15.13■□□□□ 0.01
NIPAL3-207ENST00000488155 USP42Q9H9J4 1324 aaKnown RBP15.13■□□□□ 0.01
NIPAL3-207ENST00000488155 CANXP27824 592 aaKnown RBP15.12■□□□□ 0.01
NIPAL3-207ENST00000488155 USPL1Q5W0Q7 1092 aa15.12■□□□□ 0.01
NIPAL3-207ENST00000488155 ZPR1O75312 459 aa15.11■□□□□ 0.01
NIPAL3-207ENST00000488155 ZNF496Q96IT1 587 aaPredicted RBP15.11■□□□□ 0.01
NIPAL3-207ENST00000488155 PXDNLA1KZ92 1463 aa15.11■□□□□ 0.01
NIPAL3-207ENST00000488155 SOS1Q07889 1333 aaPredicted RBP15.11■□□□□ 0.01
NIPAL3-207ENST00000488155 KCNQ3O43525 872 aa15.1■□□□□ 0.01
NIPAL3-207ENST00000488155 DPEP1P16444 411 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms