RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 FCHSD2O94868 740 aa16.27■□□□□ 0.2
SFXN3-206ENST00000487721 GAS2L2Q8NHY3 880 aa16.27■□□□□ 0.2
SFXN3-206ENST00000487721 PNNQ9H307 717 aaKnown RBP16.26■□□□□ 0.19
SFXN3-206ENST00000487721 COL3A1P02461 1466 aaPredicted RBP16.26■□□□□ 0.19
SFXN3-206ENST00000487721 PKD1L3Q7Z443 1732 aa16.25■□□□□ 0.19
SFXN3-206ENST00000487721 MYBBP1AQ9BQG0 1328 aaKnown RBP16.25■□□□□ 0.19
SFXN3-206ENST00000487721 MTHFSDQ2M296 383 aaKnown RBP16.25■□□□□ 0.19
SFXN3-206ENST00000487721 PALLDQ8WX93 1383 aa16.25■□□□□ 0.19
SFXN3-206ENST00000487721 PRKAR2BP31323 418 aa16.24■□□□□ 0.19
SFXN3-206ENST00000487721 COL23A1Q86Y22 540 aaPredicted RBP16.24■□□□□ 0.19
SFXN3-206ENST00000487721 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
SFXN3-206ENST00000487721 RSPH6AQ9H0K4 717 aa16.23■□□□□ 0.19
SFXN3-206ENST00000487721 SHANK3Q9BYB0 1731 aa16.22■□□□□ 0.19
SFXN3-206ENST00000487721 GNAT3A8MTJ3 354 aa16.22■□□□□ 0.19
SFXN3-206ENST00000487721 NLGN2Q8NFZ4 835 aa16.22■□□□□ 0.19
SFXN3-206ENST00000487721 UTRNP46939 3433 aa16.22■□□□□ 0.19
SFXN3-206ENST00000487721 NFATC2IPQ8NCF5 419 aa16.21■□□□□ 0.19
SFXN3-206ENST00000487721 PRKRIP1Q9H875 184 aaPredicted RBP16.21■□□□□ 0.19
SFXN3-206ENST00000487721 ASAP1Q9ULH1 1129 aa16.21■□□□□ 0.19
SFXN3-206ENST00000487721 DOT1LQ8TEK3 1739 aa16.21■□□□□ 0.19
SFXN3-206ENST00000487721 LOC102724428A0A0B4J2F2 783 aa16.2■□□□□ 0.18
SFXN3-206ENST00000487721 RNMTO43148 476 aaKnown RBP16.2■□□□□ 0.18
SFXN3-206ENST00000487721 SIK1P57059 783 aa16.2■□□□□ 0.18
SFXN3-206ENST00000487721 RTF1Q92541 710 aaKnown RBP16.2■□□□□ 0.18
SFXN3-206ENST00000487721 ATG3Q9NT62 314 aa16.2■□□□□ 0.18
SFXN3-206ENST00000487721 KDM6AO15550 1401 aaPredicted RBP16.19■□□□□ 0.18
SFXN3-206ENST00000487721 ATP6V1AP38606 617 aa16.19■□□□□ 0.18
SFXN3-206ENST00000487721 C1QTNF8P60827 252 aa16.19■□□□□ 0.18
SFXN3-206ENST00000487721 TEFQ10587 303 aa16.19■□□□□ 0.18
SFXN3-206ENST00000487721 MSL1Q68DK7 614 aa16.19■□□□□ 0.18
SFXN3-206ENST00000487721 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
SFXN3-206ENST00000487721 SLC52A2Q9HAB3 445 aa16.19■□□□□ 0.18
SFXN3-206ENST00000487721 LGR6Q9HBX8 967 aa16.19■□□□□ 0.18
SFXN3-206ENST00000487721 WDR43Q15061 677 aaKnown RBP eCLIP16.18■□□□□ 0.18
SFXN3-206ENST00000487721 FLAD1Q8NFF5 587 aa16.18■□□□□ 0.18
SFXN3-206ENST00000487721 PHACTR3Q96KR7 559 aa16.18■□□□□ 0.18
SFXN3-206ENST00000487721 MAPK8IP3Q9UPT6 1336 aa16.18■□□□□ 0.18
SFXN3-206ENST00000487721 GRIN3BO60391 1043 aa16.17■□□□□ 0.18
SFXN3-206ENST00000487721 AK7Q96M32 723 aa16.17■□□□□ 0.18
SFXN3-206ENST00000487721 YBX3P16989 372 aaKnown RBP eCLIP16.16■□□□□ 0.18
SFXN3-206ENST00000487721 LY75O60449 1722 aa16.16■□□□□ 0.18
SFXN3-206ENST00000487721 QSER1Q2KHR3 1735 aa16.16■□□□□ 0.18
SFXN3-206ENST00000487721 ANP32CO43423 234 aa16.15■□□□□ 0.18
SFXN3-206ENST00000487721 HTATSF1O43719 755 aaKnown RBP16.15■□□□□ 0.18
SFXN3-206ENST00000487721 PTCD1O75127 700 aaKnown RBP16.15■□□□□ 0.18
SFXN3-206ENST00000487721 CHD4Q14839 1912 aa16.14■□□□□ 0.17
SFXN3-206ENST00000487721 SENP3-EIF4A1A0A087X0R7 540 aa16.14■□□□□ 0.17
SFXN3-206ENST00000487721 TTC5Q8N0Z6 440 aa16.14■□□□□ 0.17
SFXN3-206ENST00000487721 CD2APQ9Y5K6 639 aa16.14■□□□□ 0.17
SFXN3-206ENST00000487721 IL17REQ8NFR9 667 aa16.13■□□□□ 0.17
SFXN3-206ENST00000487721 COL24A1Q17RW2 1714 aa16.13■□□□□ 0.17
SFXN3-206ENST00000487721 TOGARAM1Q9Y4F4 1720 aa16.12■□□□□ 0.17
SFXN3-206ENST00000487721 TUBGCP6Q96RT7 1819 aa16.11■□□□□ 0.17
SFXN3-206ENST00000487721 GIGYF1O75420 1035 aaPredicted RBP16.11■□□□□ 0.17
SFXN3-206ENST00000487721 ITPK1Q13572 414 aa16.11■□□□□ 0.17
SFXN3-206ENST00000487721 NFE2L2Q16236 605 aa16.11■□□□□ 0.17
SFXN3-206ENST00000487721 SMIM5Q71RC9 77 aa16.11■□□□□ 0.17
SFXN3-206ENST00000487721 AMIGO3Q86WK7 504 aa16.11■□□□□ 0.17
SFXN3-206ENST00000487721 LINC00116Q8NCU8 138 aa16.11■□□□□ 0.17
SFXN3-206ENST00000487721 PLEKHF1Q96S99 279 aa16.11■□□□□ 0.17
SFXN3-206ENST00000487721 BTBD11A6QL63 1104 aa16.1■□□□□ 0.17
SFXN3-206ENST00000487721 PHF14O94880 888 aa16.1■□□□□ 0.17
SFXN3-206ENST00000487721 SLC39A6Q13433 755 aa16.1■□□□□ 0.17
SFXN3-206ENST00000487721 RC3H1Q5TC82 1133 aaKnown RBP16.1■□□□□ 0.17
SFXN3-206ENST00000487721 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.09■□□□□ 0.17
SFXN3-206ENST00000487721 GNPATO15228 680 aa16.09■□□□□ 0.17
SFXN3-206ENST00000487721 SSFA2P28290 1259 aa16.09■□□□□ 0.17
SFXN3-206ENST00000487721 MCM10Q7L590 875 aa16.09■□□□□ 0.17
SFXN3-206ENST00000487721 VSIG10Q8N0Z9 540 aa16.09■□□□□ 0.17
SFXN3-206ENST00000487721 RTCBQ9Y3I0 505 aaKnown RBP16.09■□□□□ 0.17
SFXN3-206ENST00000487721 LMOD3Q0VAK6 560 aa16.08■□□□□ 0.16
SFXN3-206ENST00000487721 ZNF790Q6PG37 636 aa16.08■□□□□ 0.16
SFXN3-206ENST00000487721 RUNDC1Q96C34 613 aa16.08■□□□□ 0.16
SFXN3-206ENST00000487721 SLC4A9Q96Q91 983 aa16.08■□□□□ 0.16
SFXN3-206ENST00000487721 CEMIPQ8WUJ3 1361 aa16.08■□□□□ 0.16
SFXN3-206ENST00000487721 VIRMAQ69YN4 1812 aaKnown RBP16.08■□□□□ 0.16
SFXN3-206ENST00000487721 TRAPPC3LQ5T215 181 aa16.07■□□□□ 0.16
SFXN3-206ENST00000487721 TEX13AQ9BXU3 409 aaPredicted RBP16.07■□□□□ 0.16
SFXN3-206ENST00000487721 MRC1P22897 1456 aa16.07■□□□□ 0.16
SFXN3-206ENST00000487721 ITGB4P16144 1822 aa16.07■□□□□ 0.16
SFXN3-206ENST00000487721 GOLGB1Q14789 3259 aaKnown RBP16.07■□□□□ 0.16
SFXN3-206ENST00000487721 CNTNAP4Q9C0A0 1308 aa16.06■□□□□ 0.16
SFXN3-206ENST00000487721 STARD3NLO95772 234 aa16.06■□□□□ 0.16
SFXN3-206ENST00000487721 RIPK4P57078 832 aa16.06■□□□□ 0.16
SFXN3-206ENST00000487721 TAF7Q15545 349 aaPredicted RBP16.06■□□□□ 0.16
SFXN3-206ENST00000487721 PNISRQ8TF01 805 aaKnown RBP16.06■□□□□ 0.16
SFXN3-206ENST00000487721 FMNL2Q96PY5 1086 aa16.06■□□□□ 0.16
SFXN3-206ENST00000487721 ADAMTS8Q9UP79 889 aa16.06■□□□□ 0.16
SFXN3-206ENST00000487721 DCTN1Q14203 1278 aa16.05■□□□□ 0.16
SFXN3-206ENST00000487721 C5P01031 1676 aa16.05■□□□□ 0.16
SFXN3-206ENST00000487721 RPS6KA4O75676 772 aa16.04■□□□□ 0.16
SFXN3-206ENST00000487721 CRKLP46109 303 aaKnown RBP16.04■□□□□ 0.16
SFXN3-206ENST00000487721 DIEXFQ68CQ4 756 aaKnown RBP16.04■□□□□ 0.16
SFXN3-206ENST00000487721 DNAJC10Q8IXB1 793 aa16.04■□□□□ 0.16
SFXN3-206ENST00000487721 CCDC146Q8IYE0 955 aa16.04■□□□□ 0.16
SFXN3-206ENST00000487721 C4BP0C0L5 1744 aa16.03■□□□□ 0.16
SFXN3-206ENST00000487721 RFC4P35249 363 aa16.03■□□□□ 0.16
SFXN3-206ENST00000487721 TMPOP42166 694 aaKnown RBP16.03■□□□□ 0.16
SFXN3-206ENST00000487721 ZNF496Q96IT1 587 aaPredicted RBP16.03■□□□□ 0.16
SFXN3-206ENST00000487721 CCDC87Q9NVE4 849 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms