RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 FOXC1Q12948 553 aa9.7□□□□□ -0.86
SEC22C-215ENST00000487701 TSC1Q92574 1164 aa9.7□□□□□ -0.86
SEC22C-215ENST00000487701 ADGRB3O60242 1522 aa9.7□□□□□ -0.86
SEC22C-215ENST00000487701 TMEM131LA2VDJ0 1609 aa9.69□□□□□ -0.86
SEC22C-215ENST00000487701 GDF9O60383 454 aa9.69□□□□□ -0.86
SEC22C-215ENST00000487701 TRIM32Q13049 653 aa9.69□□□□□ -0.86
SEC22C-215ENST00000487701 PRPF38BQ5VTL8 546 aaKnown RBP9.69□□□□□ -0.86
SEC22C-215ENST00000487701 IQGAP1P46940 1657 aa9.68□□□□□ -0.86
SEC22C-215ENST00000487701 CFAP99D6REC4 459 aa9.68□□□□□ -0.86
SEC22C-215ENST00000487701 DGAT1O75907 488 aa9.68□□□□□ -0.86
SEC22C-215ENST00000487701 CCNYL3P0C7X3 344 aa9.68□□□□□ -0.86
SEC22C-215ENST00000487701 QPCTQ16769 361 aa9.68□□□□□ -0.86
SEC22C-215ENST00000487701 PTPRNQ16849 979 aa9.68□□□□□ -0.86
SEC22C-215ENST00000487701 ZNF787Q6DD87 383 aa9.68□□□□□ -0.86
SEC22C-215ENST00000487701 CLTCL1P53675 1640 aa9.67□□□□□ -0.86
SEC22C-215ENST00000487701 SLIT1O75093 1534 aa9.67□□□□□ -0.86
SEC22C-215ENST00000487701 ARHGAP23Q9P227 1491 aa9.67□□□□□ -0.86
SEC22C-215ENST00000487701 PTPRTO14522 1441 aa9.67□□□□□ -0.86
SEC22C-215ENST00000487701 PKDCCQ504Y2 493 aa9.67□□□□□ -0.86
SEC22C-215ENST00000487701 KIF1BO60333 1816 aa9.67□□□□□ -0.86
SEC22C-215ENST00000487701 MYT1Q01538 1121 aa9.66□□□□□ -0.86
SEC22C-215ENST00000487701 TRPM2O94759 1503 aa9.66□□□□□ -0.86
SEC22C-215ENST00000487701 TUSC1Q2TAM9 212 aa9.65□□□□□ -0.86
SEC22C-215ENST00000487701 SH3D19Q5HYK7 790 aa9.65□□□□□ -0.86
SEC22C-215ENST00000487701 DESI1Q6ICB0 168 aa9.65□□□□□ -0.86
SEC22C-215ENST00000487701 STRCP1A6NGW2 1772 aa9.65□□□□□ -0.87
SEC22C-215ENST00000487701 SETD5Q9C0A6 1442 aa9.65□□□□□ -0.87
SEC22C-215ENST00000487701 PLEKHG3A1L390 1219 aa9.64□□□□□ -0.87
SEC22C-215ENST00000487701 LILRB3O75022 631 aa9.64□□□□□ -0.87
SEC22C-215ENST00000487701 IDI1Q13907 227 aa9.64□□□□□ -0.87
SEC22C-215ENST00000487701 PKD2L1Q9P0L9 805 aa9.64□□□□□ -0.87
SEC22C-215ENST00000487701 MED14O60244 1454 aa9.64□□□□□ -0.87
SEC22C-215ENST00000487701 LTBP4Q8N2S1 1624 aa9.64□□□□□ -0.87
SEC22C-215ENST00000487701 CTHP32929 405 aa9.63□□□□□ -0.87
SEC22C-215ENST00000487701 SKIV2LQ15477 1246 aaKnown RBP9.63□□□□□ -0.87
SEC22C-215ENST00000487701 THEMISQ8N1K5 641 aaPredicted RBP9.63□□□□□ -0.87
SEC22C-215ENST00000487701 HELBQ8NG08 1087 aaPredicted RBP9.63□□□□□ -0.87
SEC22C-215ENST00000487701 SCAF11Q99590 1463 aaKnown RBP9.63□□□□□ -0.87
SEC22C-215ENST00000487701 RAB3GAP2Q9H2M9 1393 aa9.63□□□□□ -0.87
SEC22C-215ENST00000487701 TMEM2Q9UHN6 1383 aa9.63□□□□□ -0.87
SEC22C-215ENST00000487701 BRPF1P55201 1214 aaPredicted RBP9.62□□□□□ -0.87
SEC22C-215ENST00000487701 PTCRAQ6ISU1 281 aaPredicted RBP9.62□□□□□ -0.87
SEC22C-215ENST00000487701 TRIM52Q96A61 297 aa9.62□□□□□ -0.87
SEC22C-215ENST00000487701 SLC52A1Q9NWF4 448 aa9.62□□□□□ -0.87
SEC22C-215ENST00000487701 NPHP4O75161 1426 aaPredicted RBP9.62□□□□□ -0.87
SEC22C-215ENST00000487701 FAM187AA6NFU0 413 aa9.61□□□□□ -0.87
SEC22C-215ENST00000487701 LTKP29376 864 aa9.61□□□□□ -0.87
SEC22C-215ENST00000487701 KCNH2Q12809 1159 aa9.61□□□□□ -0.87
SEC22C-215ENST00000487701 RTL5Q5HYW3 569 aaPredicted RBP9.61□□□□□ -0.87
SEC22C-215ENST00000487701 LYPD8Q6UX82 237 aa9.61□□□□□ -0.87
SEC22C-215ENST00000487701 UNC93B1Q9H1C4 597 aa9.61□□□□□ -0.87
SEC22C-215ENST00000487701 EVA1BQ9NVM1 165 aa9.61□□□□□ -0.87
SEC22C-215ENST00000487701 ZFYVE9O95405 1425 aa9.61□□□□□ -0.87
SEC22C-215ENST00000487701 ANKLE2Q86XL3 938 aa9.6□□□□□ -0.87
SEC22C-215ENST00000487701 CYP4X1Q8N118 509 aa9.6□□□□□ -0.87
SEC22C-215ENST00000487701 PROCA1Q8NCQ7 364 aaPredicted RBP9.6□□□□□ -0.87
SEC22C-215ENST00000487701 IL27Q8NEV9 243 aa9.6□□□□□ -0.87
SEC22C-215ENST00000487701 PPLO60437 1756 aa9.6□□□□□ -0.87
SEC22C-215ENST00000487701 IFT172Q9UG01 1749 aa9.59□□□□□ -0.87
SEC22C-215ENST00000487701 XIRP1Q702N8 1843 aaKnown RBP9.59□□□□□ -0.87
SEC22C-215ENST00000487701 WNT7AO00755 349 aa9.59□□□□□ -0.87
SEC22C-215ENST00000487701 PRKCSHP14314 528 aaPredicted RBP9.59□□□□□ -0.87
SEC22C-215ENST00000487701 WNT7BP56706 349 aa9.59□□□□□ -0.87
SEC22C-215ENST00000487701 LINC01559Q495D7 138 aa9.59□□□□□ -0.87
SEC22C-215ENST00000487701 ZNF335Q9H4Z2 1342 aaPredicted RBP9.58□□□□□ -0.88
SEC22C-215ENST00000487701 RIMS2Q9UQ26 1411 aa9.58□□□□□ -0.88
SEC22C-215ENST00000487701 NEXMIFQ5QGS0 1516 aa9.58□□□□□ -0.88
SEC22C-215ENST00000487701 NRXN3Q9Y4C0 1643 aa9.58□□□□□ -0.88
SEC22C-215ENST00000487701 TTC24A2A3L6 582 aaPredicted RBP9.58□□□□□ -0.88
SEC22C-215ENST00000487701 PER1O15534 1290 aaPredicted RBP9.58□□□□□ -0.88
SEC22C-215ENST00000487701 SKOR1P84550 965 aa9.58□□□□□ -0.88
SEC22C-215ENST00000487701 RC3H1Q5TC82 1133 aaKnown RBP9.58□□□□□ -0.88
SEC22C-215ENST00000487701 MAP10Q9P2G4 905 aa9.58□□□□□ -0.88
SEC22C-215ENST00000487701 CHD2O14647 1828 aaKnown RBP9.58□□□□□ -0.88
SEC22C-215ENST00000487701 TXNDC2Q86VQ3 553 aa9.57□□□□□ -0.88
SEC22C-215ENST00000487701 MRGPRX2Q96LB1 330 aa9.57□□□□□ -0.88
SEC22C-215ENST00000487701 MPHOSPH9Q99550 1183 aa9.57□□□□□ -0.88
SEC22C-215ENST00000487701 ZNF775Q96BV0 537 aaPredicted RBP9.56□□□□□ -0.88
SEC22C-215ENST00000487701 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.56□□□□□ -0.88
SEC22C-215ENST00000487701 SETD1AO15047 1707 aaKnown RBP9.56□□□□□ -0.88
SEC22C-215ENST00000487701 POTECB2RU33 542 aa9.55□□□□□ -0.88
SEC22C-215ENST00000487701 F12P00748 615 aaPredicted RBP9.55□□□□□ -0.88
SEC22C-215ENST00000487701 EHBP1Q8NDI1 1231 aa9.55□□□□□ -0.88
SEC22C-215ENST00000487701 BAP1Q92560 729 aa9.55□□□□□ -0.88
SEC22C-215ENST00000487701 PCMTD1Q96MG8 357 aaPredicted RBP9.55□□□□□ -0.88
SEC22C-215ENST00000487701 TOR4AQ9NXH8 423 aa9.55□□□□□ -0.88
SEC22C-215ENST00000487701 NWD1Q149M9 1564 aa9.54□□□□□ -0.88
SEC22C-215ENST00000487701 PLEKHG1Q9ULL1 1385 aa9.54□□□□□ -0.88
SEC22C-215ENST00000487701 SH3BP2P78314 561 aa9.54□□□□□ -0.88
SEC22C-215ENST00000487701 AAASQ9NRG9 546 aa9.54□□□□□ -0.88
SEC22C-215ENST00000487701 EID1Q9Y6B2 187 aa9.54□□□□□ -0.88
SEC22C-215ENST00000487701 CPS1P31327 1500 aa9.54□□□□□ -0.88
SEC22C-215ENST00000487701 DIP2AQ14689 1571 aa9.54□□□□□ -0.88
SEC22C-215ENST00000487701 SETBP1Q9Y6X0 1596 aa9.54□□□□□ -0.88
SEC22C-215ENST00000487701 ST8SIA5O15466 376 aa9.53□□□□□ -0.88
SEC22C-215ENST00000487701 ZNF511Q8NB15 262 aa9.53□□□□□ -0.88
SEC22C-215ENST00000487701 SNIP1Q8TAD8 396 aaKnown RBP9.53□□□□□ -0.88
SEC22C-215ENST00000487701 CCDC144AA2RUR9 1427 aa9.53□□□□□ -0.88
SEC22C-215ENST00000487701 ADAMTS13Q76LX8 1427 aa9.53□□□□□ -0.88
SEC22C-215ENST00000487701 ACIN1Q9UKV3 1341 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms