RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 CCNL1Q9UK58 526 aaPredicted RBP11.87□□□□□ -0.51
PRKCB-208ENST00000487674 CLSPNQ9HAW4 1339 aa11.86□□□□□ -0.51
PRKCB-208ENST00000487674 TAF1LQ8IZX4 1826 aa11.86□□□□□ -0.51
PRKCB-208ENST00000487674 POLD1P28340 1107 aa11.86□□□□□ -0.51
PRKCB-208ENST00000487674 KCNQ4P56696 695 aa11.86□□□□□ -0.51
PRKCB-208ENST00000487674 ITGB4P16144 1822 aa11.86□□□□□ -0.51
PRKCB-208ENST00000487674 EMILIN1Q9Y6C2 1016 aa11.85□□□□□ -0.51
PRKCB-208ENST00000487674 MAP2P11137 1827 aaKnown RBP11.84□□□□□ -0.51
PRKCB-208ENST00000487674 PALLDQ8WX93 1383 aa11.84□□□□□ -0.51
PRKCB-208ENST00000487674 CYP27B1O15528 508 aa11.83□□□□□ -0.52
PRKCB-208ENST00000487674 HMGB2P26583 209 aaKnown RBP11.83□□□□□ -0.52
PRKCB-208ENST00000487674 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
PRKCB-208ENST00000487674 KLHL34Q8N239 644 aa11.82□□□□□ -0.52
PRKCB-208ENST00000487674 ZNF784Q8NCA9 323 aaPredicted RBP11.82□□□□□ -0.52
PRKCB-208ENST00000487674 UTRNP46939 3433 aa11.82□□□□□ -0.52
PRKCB-208ENST00000487674 WASHC2AQ641Q2 1341 aa11.82□□□□□ -0.52
PRKCB-208ENST00000487674 PLEKHG2Q9H7P9 1386 aa11.81□□□□□ -0.52
PRKCB-208ENST00000487674 PPM1GO15355 546 aaPredicted RBP11.81□□□□□ -0.52
PRKCB-208ENST00000487674 UBR3Q6ZT12 1888 aa11.8□□□□□ -0.52
PRKCB-208ENST00000487674 POTEB2H3BUK9 544 aa11.8□□□□□ -0.52
PRKCB-208ENST00000487674 GPR162Q16538 588 aa11.8□□□□□ -0.52
PRKCB-208ENST00000487674 MPRIPQ6WCQ1 1025 aa11.8□□□□□ -0.52
PRKCB-208ENST00000487674 COL23A1Q86Y22 540 aaPredicted RBP11.8□□□□□ -0.52
PRKCB-208ENST00000487674 SMARCC1Q92922 1105 aaPredicted RBP11.8□□□□□ -0.52
PRKCB-208ENST00000487674 SPG7Q9UQ90 795 aa11.8□□□□□ -0.52
PRKCB-208ENST00000487674 NKX1-1Q15270 411 aaPredicted RBP11.79□□□□□ -0.52
PRKCB-208ENST00000487674 FLAD1Q8NFF5 587 aa11.79□□□□□ -0.52
PRKCB-208ENST00000487674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.79□□□□□ -0.52
PRKCB-208ENST00000487674 PELP1Q8IZL8 1130 aaKnown RBP11.78□□□□□ -0.52
PRKCB-208ENST00000487674 NLGN2Q8NFZ4 835 aa11.78□□□□□ -0.52
PRKCB-208ENST00000487674 EYA1Q99502 592 aa11.78□□□□□ -0.52
PRKCB-208ENST00000487674 POLKQ9UBT6 870 aa11.78□□□□□ -0.52
PRKCB-208ENST00000487674 MSL1Q68DK7 614 aa11.77□□□□□ -0.53
PRKCB-208ENST00000487674 PIGBQ92521 554 aa11.77□□□□□ -0.53
PRKCB-208ENST00000487674 OTUD5Q96G74 571 aa11.77□□□□□ -0.53
PRKCB-208ENST00000487674 AK7Q96M32 723 aa11.77□□□□□ -0.53
PRKCB-208ENST00000487674 POLR3GLQ9BT43 218 aa11.77□□□□□ -0.53
PRKCB-208ENST00000487674 PCGF6Q9BYE7 350 aa11.77□□□□□ -0.53
PRKCB-208ENST00000487674 EIF4G2P78344 907 aaKnown RBP eCLIP11.76□□□□□ -0.53
PRKCB-208ENST00000487674 TMOD3Q9NYL9 352 aa11.76□□□□□ -0.53
PRKCB-208ENST00000487674 ZNF831Q5JPB2 1677 aa11.75□□□□□ -0.53
PRKCB-208ENST00000487674 LOC102724428A0A0B4J2F2 783 aa11.75□□□□□ -0.53
PRKCB-208ENST00000487674 PHKG2P15735 406 aa11.75□□□□□ -0.53
PRKCB-208ENST00000487674 SIK1P57059 783 aa11.75□□□□□ -0.53
PRKCB-208ENST00000487674 EIF4A2Q14240 407 aaKnown RBP11.75□□□□□ -0.53
PRKCB-208ENST00000487674 IFNL2Q8IZJ0 200 aa11.75□□□□□ -0.53
PRKCB-208ENST00000487674 IGSF1Q8N6C5 1336 aa11.75□□□□□ -0.53
PRKCB-208ENST00000487674 SSFA2P28290 1259 aa11.74□□□□□ -0.53
PRKCB-208ENST00000487674 TNNT2P45379 298 aaPredicted RBP11.74□□□□□ -0.53
PRKCB-208ENST00000487674 CD2APQ9Y5K6 639 aa11.74□□□□□ -0.53
PRKCB-208ENST00000487674 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.73□□□□□ -0.53
PRKCB-208ENST00000487674 GRIN3BO60391 1043 aa11.73□□□□□ -0.53
PRKCB-208ENST00000487674 HSPA5P11021 654 aaKnown RBP11.73□□□□□ -0.53
PRKCB-208ENST00000487674 YBX3P16989 372 aaKnown RBP eCLIP11.73□□□□□ -0.533e-9■□□□□ 9.9
PRKCB-208ENST00000487674 KDRP35968 1356 aa11.73□□□□□ -0.53
PRKCB-208ENST00000487674 AMIGO3Q86WK7 504 aa11.73□□□□□ -0.53
PRKCB-208ENST00000487674 LINC00116Q8NCU8 138 aa11.73□□□□□ -0.53
PRKCB-208ENST00000487674 MS4A3Q96HJ5 214 aa11.73□□□□□ -0.53
PRKCB-208ENST00000487674 COL5A3P25940 1745 aaPredicted RBP11.72□□□□□ -0.53
PRKCB-208ENST00000487674 PHF14O94880 888 aa11.72□□□□□ -0.53
PRKCB-208ENST00000487674 PANK3Q9H999 370 aa11.72□□□□□ -0.53
PRKCB-208ENST00000487674 ASAP1Q9ULH1 1129 aa11.72□□□□□ -0.53
PRKCB-208ENST00000487674 GOLGB1Q14789 3259 aaKnown RBP11.72□□□□□ -0.53
PRKCB-208ENST00000487674 ITPK1Q13572 414 aa11.71□□□□□ -0.53
PRKCB-208ENST00000487674 KDM6AO15550 1401 aaPredicted RBP11.7□□□□□ -0.54
PRKCB-208ENST00000487674 ERVV-2B6SEH9 535 aa11.7□□□□□ -0.54
PRKCB-208ENST00000487674 GNPATO15228 680 aa11.7□□□□□ -0.54
PRKCB-208ENST00000487674 HSP90AB1P08238 724 aaKnown RBP11.7□□□□□ -0.54
PRKCB-208ENST00000487674 ATP6V1AP38606 617 aa11.7□□□□□ -0.54
PRKCB-208ENST00000487674 C1QTNF8P60827 252 aa11.7□□□□□ -0.54
PRKCB-208ENST00000487674 FKBP8Q14318 412 aa11.7□□□□□ -0.54
PRKCB-208ENST00000487674 DCAF5Q96JK2 942 aa11.7□□□□□ -0.54
PRKCB-208ENST00000487674 TSPYL2Q9H2G4 693 aaPredicted RBP11.7□□□□□ -0.54
PRKCB-208ENST00000487674 ATG3Q9NT62 314 aa11.7□□□□□ -0.54
PRKCB-208ENST00000487674 KIF13BQ9NQT8 1826 aa11.7□□□□□ -0.54
PRKCB-208ENST00000487674 CICQ96RK0 1608 aaPredicted RBP11.69□□□□□ -0.54
PRKCB-208ENST00000487674 GIGYF1O75420 1035 aaPredicted RBP11.69□□□□□ -0.54
PRKCB-208ENST00000487674 AMOTQ4VCS5 1084 aa11.69□□□□□ -0.54
PRKCB-208ENST00000487674 PLEKHO1Q53GL0 409 aaPredicted RBP11.69□□□□□ -0.54
PRKCB-208ENST00000487674 C4AP0C0L4 1744 aa11.69□□□□□ -0.54
PRKCB-208ENST00000487674 ASTLQ6HA08 431 aaPredicted RBP11.68□□□□□ -0.54
PRKCB-208ENST00000487674 ZNF530Q6P9A1 599 aaPredicted RBP11.68□□□□□ -0.54
PRKCB-208ENST00000487674 SMIM5Q71RC9 77 aa11.68□□□□□ -0.54
PRKCB-208ENST00000487674 MORC1Q86VD1 984 aa11.68□□□□□ -0.54
PRKCB-208ENST00000487674 CCER1Q8TC90 406 aaPredicted RBP11.68□□□□□ -0.54
PRKCB-208ENST00000487674 ATP10DQ9P241 1426 aa11.68□□□□□ -0.54
PRKCB-208ENST00000487674 ADCY9O60503 1353 aa11.67□□□□□ -0.54
PRKCB-208ENST00000487674 SCN11AQ9UI33 1791 aa11.67□□□□□ -0.54
PRKCB-208ENST00000487674 CNTNAP4Q9C0A0 1308 aa11.67□□□□□ -0.54
PRKCB-208ENST00000487674 KIAA1551Q9HCM1 1747 aa11.67□□□□□ -0.54
PRKCB-208ENST00000487674 SENP3-EIF4A1A0A087X0R7 540 aa11.67□□□□□ -0.54
PRKCB-208ENST00000487674 ATMINO43313 823 aaPredicted RBP11.67□□□□□ -0.54
PRKCB-208ENST00000487674 KNSTRNQ9Y448 316 aa11.67□□□□□ -0.54
PRKCB-208ENST00000487674 C1orf141Q5JVX7 400 aa11.66□□□□□ -0.54
PRKCB-208ENST00000487674 AEBP1Q8IUX7 1158 aa11.66□□□□□ -0.54
PRKCB-208ENST00000487674 SLC4A9Q96Q91 983 aa11.66□□□□□ -0.54
PRKCB-208ENST00000487674 RTCBQ9Y3I0 505 aaKnown RBP11.66□□□□□ -0.54
PRKCB-208ENST00000487674 TJP1Q07157 1748 aa11.66□□□□□ -0.54
PRKCB-208ENST00000487674 PXDNLA1KZ92 1463 aa11.65□□□□□ -0.54
PRKCB-208ENST00000487674 MMP10P09238 476 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms