RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 SIK1P57059 783 aa23.06■■□□□ 1.28
TOM1-214ENST00000487670 ASAP1Q9ULH1 1129 aa23.06■■□□□ 1.28
TOM1-214ENST00000487670 NCAPD2Q15021 1401 aa23.06■■□□□ 1.28
TOM1-214ENST00000487670 FYB1O15117 783 aa23.05■■□□□ 1.28
TOM1-214ENST00000487670 SMARCC1Q92922 1105 aaPredicted RBP23.05■■□□□ 1.28
TOM1-214ENST00000487670 ZNF831Q5JPB2 1677 aa23.04■■□□□ 1.28
TOM1-214ENST00000487670 KLRG1Q96E93 195 aa23.04■■□□□ 1.28
TOM1-214ENST00000487670 ARHGAP27Q6ZUM4 889 aa23.03■■□□□ 1.28
TOM1-214ENST00000487670 FLT4P35916 1363 aa23.02■■□□□ 1.28
TOM1-214ENST00000487670 DPEP1P16444 411 aa23.02■■□□□ 1.28
TOM1-214ENST00000487670 PUS7Q96PZ0 661 aaKnown RBP23.02■■□□□ 1.28
TOM1-214ENST00000487670 JMYQ8N9B5 988 aa23.01■■□□□ 1.27
TOM1-214ENST00000487670 KDRP35968 1356 aa23.01■■□□□ 1.27
TOM1-214ENST00000487670 RBM46Q8TBY0 533 aaKnown RBP23■■□□□ 1.27
TOM1-214ENST00000487670 EMILIN1Q9Y6C2 1016 aa23■■□□□ 1.27
TOM1-214ENST00000487670 ST20-MTHFSA0A0A6YYL1 179 aa22.99■■□□□ 1.27
TOM1-214ENST00000487670 NKX1-1Q15270 411 aaPredicted RBP22.99■■□□□ 1.27
TOM1-214ENST00000487670 C9orf131Q5VYM1 1079 aa22.99■■□□□ 1.27
TOM1-214ENST00000487670 SLC4A9Q96Q91 983 aa22.99■■□□□ 1.27
TOM1-214ENST00000487670 TIAM2Q8IVF5 1701 aa22.99■■□□□ 1.27
TOM1-214ENST00000487670 AFDNP55196 1824 aaKnown RBP22.98■■□□□ 1.27
TOM1-214ENST00000487670 FCHSD2O94868 740 aa22.98■■□□□ 1.27
TOM1-214ENST00000487670 KCNA3P22001 575 aa22.98■■□□□ 1.27
TOM1-214ENST00000487670 ATP6V1AP38606 617 aa22.98■■□□□ 1.27
TOM1-214ENST00000487670 ADAMTS7Q9UKP4 1686 aa22.97■■□□□ 1.27
TOM1-214ENST00000487670 TJP1Q07157 1748 aa22.97■■□□□ 1.27
TOM1-214ENST00000487670 TGFB2P61812 414 aa22.97■■□□□ 1.27
TOM1-214ENST00000487670 ATG3Q9NT62 314 aa22.97■■□□□ 1.27
TOM1-214ENST00000487670 TNS4Q8IZW8 715 aa22.95■■□□□ 1.26
TOM1-214ENST00000487670 TMOD3Q9NYL9 352 aa22.95■■□□□ 1.26
TOM1-214ENST00000487670 VIRMAQ69YN4 1812 aaKnown RBP22.94■■□□□ 1.26
TOM1-214ENST00000487670 DLEC1Q9Y238 1755 aa22.94■■□□□ 1.26
TOM1-214ENST00000487670 GYS1P13807 737 aa22.93■■□□□ 1.26
TOM1-214ENST00000487670 PLEKHG2Q9H7P9 1386 aa22.92■■□□□ 1.26
TOM1-214ENST00000487670 ARHGEF1Q92888 912 aaKnown RBP22.92■■□□□ 1.26
TOM1-214ENST00000487670 RRAGCQ9HB90 399 aa22.92■■□□□ 1.26
TOM1-214ENST00000487670 PRELPP51888 382 aa22.91■■□□□ 1.26
TOM1-214ENST00000487670 TMF1P82094 1093 aa22.91■■□□□ 1.26
TOM1-214ENST00000487670 KIF24Q5T7B8 1368 aa22.9■■□□□ 1.26
TOM1-214ENST00000487670 PHKG2P15735 406 aa22.9■■□□□ 1.26
TOM1-214ENST00000487670 HMGB2P26583 209 aaKnown RBP22.9■■□□□ 1.26
TOM1-214ENST00000487670 C16orf71Q8IYS4 520 aaPredicted RBP22.9■■□□□ 1.26
TOM1-214ENST00000487670 FSTL1Q12841 308 aa22.89■■□□□ 1.25
TOM1-214ENST00000487670 TRAPPC3LQ5T215 181 aa22.89■■□□□ 1.25
TOM1-214ENST00000487670 EYA1Q99502 592 aa22.89■■□□□ 1.25
TOM1-214ENST00000487670 CCDC87Q9NVE4 849 aa22.89■■□□□ 1.25
TOM1-214ENST00000487670 RNF181Q9P0P0 153 aa22.89■■□□□ 1.25
TOM1-214ENST00000487670 RTCBQ9Y3I0 505 aaKnown RBP22.89■■□□□ 1.25
TOM1-214ENST00000487670 DCAF5Q96JK2 942 aa22.88■■□□□ 1.25
TOM1-214ENST00000487670 SPG7Q9UQ90 795 aa22.88■■□□□ 1.25
TOM1-214ENST00000487670 TONSLQ96HA7 1378 aa22.88■■□□□ 1.25
TOM1-214ENST00000487670 SRP68Q9UHB9 627 aaKnown RBP22.87■■□□□ 1.25
TOM1-214ENST00000487670 PPM1GO15355 546 aaPredicted RBP22.86■■□□□ 1.25
TOM1-214ENST00000487670 CHRNA5P30532 468 aa22.86■■□□□ 1.25
TOM1-214ENST00000487670 RASSF7Q02833 373 aa22.86■■□□□ 1.25
TOM1-214ENST00000487670 DDR1Q08345 913 aa22.86■■□□□ 1.25
TOM1-214ENST00000487670 NLGN1Q8N2Q7 840 aa22.86■■□□□ 1.25
TOM1-214ENST00000487670 RBM42Q9BTD8 480 aaKnown RBP22.86■■□□□ 1.25
TOM1-214ENST00000487670 CARD14Q9BXL6 1004 aa22.86■■□□□ 1.25
TOM1-214ENST00000487670 HSPA1AP0DMV8 641 aaKnown RBP22.85■■□□□ 1.25
TOM1-214ENST00000487670 HSPA1BP0DMV9 641 aaKnown RBP22.85■■□□□ 1.25
TOM1-214ENST00000487670 PARP3Q9Y6F1 533 aa22.85■■□□□ 1.25
TOM1-214ENST00000487670 CACNA1SQ13698 1873 aa22.85■■□□□ 1.25
TOM1-214ENST00000487670 NRXN2Q9P2S2 1712 aa22.85■■□□□ 1.25
TOM1-214ENST00000487670 DICER1Q9UPY3 1922 aaKnown RBP22.84■■□□□ 1.25
TOM1-214ENST00000487670 KDM6AO15550 1401 aaPredicted RBP22.84■■□□□ 1.25
TOM1-214ENST00000487670 IFNL2Q8IZJ0 200 aa22.83■■□□□ 1.25
TOM1-214ENST00000487670 SCN11AQ9UI33 1791 aa22.83■■□□□ 1.24
TOM1-214ENST00000487670 KDM2BQ8NHM5 1336 aa22.82■■□□□ 1.24
TOM1-214ENST00000487670 CNTNAP4Q9C0A0 1308 aa22.82■■□□□ 1.24
TOM1-214ENST00000487670 FKBP8Q14318 412 aa22.82■■□□□ 1.24
TOM1-214ENST00000487670 PIM2Q9P1W9 311 aa22.82■■□□□ 1.24
TOM1-214ENST00000487670 RPS6KA4O75676 772 aa22.81■■□□□ 1.24
TOM1-214ENST00000487670 RFC4P35249 363 aa22.81■■□□□ 1.24
TOM1-214ENST00000487670 ANKRD31Q8N7Z5 1873 aa22.8■■□□□ 1.24
TOM1-214ENST00000487670 DALRD3Q5D0E6 543 aaKnown RBP22.8■■□□□ 1.24
TOM1-214ENST00000487670 RC3H1Q5TC82 1133 aaKnown RBP22.8■■□□□ 1.24
TOM1-214ENST00000487670 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.79■■□□□ 1.24
TOM1-214ENST00000487670 WASHC2AQ641Q2 1341 aa22.79■■□□□ 1.24
TOM1-214ENST00000487670 ADRA2BP18089 450 aa22.78■■□□□ 1.24
TOM1-214ENST00000487670 SMC1BQ8NDV3 1235 aa22.78■■□□□ 1.24
TOM1-214ENST00000487670 COL11A2P13942 1736 aaPredicted RBP22.77■■□□□ 1.24
TOM1-214ENST00000487670 USP42Q9H9J4 1324 aaKnown RBP22.77■■□□□ 1.24
TOM1-214ENST00000487670 EIF4A2Q14240 407 aaKnown RBP22.76■■□□□ 1.23
TOM1-214ENST00000487670 FER1L6Q2WGJ9 1857 aa22.76■■□□□ 1.23
TOM1-214ENST00000487670 POLRMTO00411 1230 aaKnown RBP22.74■■□□□ 1.23
TOM1-214ENST00000487670 CRKLP46109 303 aaKnown RBP22.74■■□□□ 1.23
TOM1-214ENST00000487670 POLKQ9UBT6 870 aa22.74■■□□□ 1.23
TOM1-214ENST00000487670 PTCD1O75127 700 aaKnown RBP22.73■■□□□ 1.23
TOM1-214ENST00000487670 ERVV-2B6SEH9 535 aa22.71■■□□□ 1.23
TOM1-214ENST00000487670 POTECB2RU33 542 aa22.7■■□□□ 1.22
TOM1-214ENST00000487670 CARMIL3Q8ND23 1372 aa22.7■■□□□ 1.22
TOM1-214ENST00000487670 TM4SF1P30408 202 aa22.69■■□□□ 1.22
TOM1-214ENST00000487670 GLTPD2A6NH11 291 aa22.68■■□□□ 1.22
TOM1-214ENST00000487670 TNNT2P45379 298 aaPredicted RBP22.68■■□□□ 1.22
TOM1-214ENST00000487670 INTS5Q6P9B9 1019 aaKnown RBP22.68■■□□□ 1.22
TOM1-214ENST00000487670 NFKBIEO00221 500 aa22.66■■□□□ 1.22
TOM1-214ENST00000487670 VEGFAP15692 232 aaPredicted RBP22.66■■□□□ 1.22
TOM1-214ENST00000487670 CABP4P57796 275 aa22.66■■□□□ 1.22
TOM1-214ENST00000487670 USPL1Q5W0Q7 1092 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms