RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 SLC4A2P04920 1241 aa25.77■■□□□ 1.72
PHF1-209ENST00000487667 MPRIPQ6WCQ1 1025 aa25.77■■□□□ 1.72
PHF1-209ENST00000487667 IFNL2Q8IZJ0 200 aa25.77■■□□□ 1.72
PHF1-209ENST00000487667 BTBD11A6QL63 1104 aa25.76■■□□□ 1.72
PHF1-209ENST00000487667 INTS3Q68E01 1043 aaKnown RBP25.76■■□□□ 1.72
PHF1-209ENST00000487667 COL5A2P05997 1499 aaPredicted RBP25.76■■□□□ 1.71
PHF1-209ENST00000487667 PKD1L3Q7Z443 1732 aa25.75■■□□□ 1.71
PHF1-209ENST00000487667 ZBTB7BO15156 539 aaPredicted RBP25.75■■□□□ 1.71
PHF1-209ENST00000487667 MEGF6O75095 1541 aa25.74■■□□□ 1.71
PHF1-209ENST00000487667 EIF4A1P60842 406 aaKnown RBP25.74■■□□□ 1.71
PHF1-209ENST00000487667 PARP4Q9UKK3 1724 aaKnown RBP25.74■■□□□ 1.71
PHF1-209ENST00000487667 VIRMAQ69YN4 1812 aaKnown RBP25.73■■□□□ 1.71
PHF1-209ENST00000487667 PHKG2P15735 406 aa25.73■■□□□ 1.71
PHF1-209ENST00000487667 TOM1L2Q6ZVM7 507 aa25.73■■□□□ 1.71
PHF1-209ENST00000487667 CARD10Q9BWT7 1032 aa25.73■■□□□ 1.71
PHF1-209ENST00000487667 COL16A1Q07092 1604 aaPredicted RBP25.72■■□□□ 1.71
PHF1-209ENST00000487667 COL22A1Q8NFW1 1626 aaPredicted RBP25.72■■□□□ 1.71
PHF1-209ENST00000487667 DCAF5Q96JK2 942 aa25.71■■□□□ 1.71
PHF1-209ENST00000487667 ANP32EQ9BTT0 268 aa25.71■■□□□ 1.71
PHF1-209ENST00000487667 SIPA1L3O60292 1781 aaPredicted RBP25.7■■□□□ 1.7
PHF1-209ENST00000487667 EVA1CP58658 441 aa25.7■■□□□ 1.7
PHF1-209ENST00000487667 SCN11AQ9UI33 1791 aa25.7■■□□□ 1.7
PHF1-209ENST00000487667 RGS12O14924 1447 aa25.7■■□□□ 1.7
PHF1-209ENST00000487667 CCT4P50991 539 aaKnown RBP25.69■■□□□ 1.7
PHF1-209ENST00000487667 HDGFL1Q5TGJ6 251 aa25.69■■□□□ 1.7
PHF1-209ENST00000487667 SLC52A2Q9HAB3 445 aa25.67■■□□□ 1.7
PHF1-209ENST00000487667 COL14A1Q05707 1796 aaKnown RBP25.67■■□□□ 1.7
PHF1-209ENST00000487667 PCDH11XQ9BZA7 1347 aa25.67■■□□□ 1.7
PHF1-209ENST00000487667 PCDH11YQ9BZA8 1340 aa25.67■■□□□ 1.7
PHF1-209ENST00000487667 MRC1P22897 1456 aa25.66■■□□□ 1.7
PHF1-209ENST00000487667 FLIIQ13045 1269 aa25.66■■□□□ 1.7
PHF1-209ENST00000487667 HEG1Q9ULI3 1381 aa25.65■■□□□ 1.7
PHF1-209ENST00000487667 IL2RBP14784 551 aa25.65■■□□□ 1.7
PHF1-209ENST00000487667 ZCRB1Q8TBF4 217 aaKnown RBP25.65■■□□□ 1.7
PHF1-209ENST00000487667 KDM6AO15550 1401 aaPredicted RBP25.64■■□□□ 1.7
PHF1-209ENST00000487667 NUTM2BA6NNL0 878 aaPredicted RBP25.64■■□□□ 1.69
PHF1-209ENST00000487667 NUTM2EB1AL46 878 aaPredicted RBP25.64■■□□□ 1.69
PHF1-209ENST00000487667 NUTM2AQ8IVF1 878 aaPredicted RBP25.64■■□□□ 1.69
PHF1-209ENST00000487667 PXDNLA1KZ92 1463 aa25.64■■□□□ 1.69
PHF1-209ENST00000487667 SMC5Q8IY18 1101 aa25.63■■□□□ 1.69
PHF1-209ENST00000487667 CYP27B1O15528 508 aa25.62■■□□□ 1.69
PHF1-209ENST00000487667 ADAMTS2O95450 1211 aa25.62■■□□□ 1.69
PHF1-209ENST00000487667 FKBP5Q13451 457 aaPredicted RBP25.62■■□□□ 1.69
PHF1-209ENST00000487667 GCC1Q96CN9 775 aa25.62■■□□□ 1.69
PHF1-209ENST00000487667 PDE4AP27815 886 aa25.61■■□□□ 1.69
PHF1-209ENST00000487667 G2E3Q7L622 706 aa25.61■■□□□ 1.69
PHF1-209ENST00000487667 BACH2Q9BYV9 841 aa25.61■■□□□ 1.69
PHF1-209ENST00000487667 GIGYF1O75420 1035 aaPredicted RBP25.6■■□□□ 1.69
PHF1-209ENST00000487667 STRN4Q9NRL3 753 aa25.6■■□□□ 1.69
PHF1-209ENST00000487667 DBF4Q9UBU7 674 aaPredicted RBP25.6■■□□□ 1.69
PHF1-209ENST00000487667 HSPA1LP34931 641 aa25.59■■□□□ 1.69
PHF1-209ENST00000487667 RGS3P49796 1198 aa25.59■■□□□ 1.69
PHF1-209ENST00000487667 ZNF790Q6PG37 636 aa25.59■■□□□ 1.69
PHF1-209ENST00000487667 RPAP2Q8IXW5 612 aaPredicted RBP25.59■■□□□ 1.69
PHF1-209ENST00000487667 PDZRN3Q9UPQ7 1066 aa25.59■■□□□ 1.69
PHF1-209ENST00000487667 JCADQ9P266 1359 aa25.59■■□□□ 1.69
PHF1-209ENST00000487667 LARP1Q6PKG0 1096 aaKnown RBP25.59■■□□□ 1.69
PHF1-209ENST00000487667 NKX1-1Q15270 411 aaPredicted RBP25.58■■□□□ 1.69
PHF1-209ENST00000487667 BTG4Q9NY30 223 aa25.58■■□□□ 1.69
PHF1-209ENST00000487667 ERVV-2B6SEH9 535 aa25.57■■□□□ 1.68
PHF1-209ENST00000487667 KCNQ3O43525 872 aa25.57■■□□□ 1.68
PHF1-209ENST00000487667 EIF2S2P20042 333 aaKnown RBP25.57■■□□□ 1.68
PHF1-209ENST00000487667 CABP4P57796 275 aa25.57■■□□□ 1.68
PHF1-209ENST00000487667 FAM161AQ3B820 660 aa25.57■■□□□ 1.68
PHF1-209ENST00000487667 TTC5Q8N0Z6 440 aa25.57■■□□□ 1.68
PHF1-209ENST00000487667 NFATC2IPQ8NCF5 419 aa25.57■■□□□ 1.68
PHF1-209ENST00000487667 N4BP2Q86UW6 1770 aaPredicted RBP25.56■■□□□ 1.68
PHF1-209ENST00000487667 NECTIN2Q92692 538 aa25.55■■□□□ 1.68
PHF1-209ENST00000487667 GNAI3P08754 354 aa25.55■■□□□ 1.68
PHF1-209ENST00000487667 SLC4A10Q6U841 1118 aa25.55■■□□□ 1.68
PHF1-209ENST00000487667 HYPKQ9NX55 129 aa25.54■■□□□ 1.68
PHF1-209ENST00000487667 CHPF2Q9P2E5 772 aa25.53■■□□□ 1.68
PHF1-209ENST00000487667 ANKRD44Q8N8A2 993 aa25.52■■□□□ 1.68
PHF1-209ENST00000487667 FMNL2Q96PY5 1086 aa25.52■■□□□ 1.68
PHF1-209ENST00000487667 F6X3S4 739 aa25.51■■□□□ 1.67
PHF1-209ENST00000487667 HMMRO75330 724 aa25.51■■□□□ 1.67
PHF1-209ENST00000487667 NUCB1Q02818 461 aa25.51■■□□□ 1.67
PHF1-209ENST00000487667 SKAP1Q86WV1 359 aa25.51■■□□□ 1.67
PHF1-209ENST00000487667 ILDR1Q86SU0 546 aaPredicted RBP25.51■■□□□ 1.67
PHF1-209ENST00000487667 SNRPA1P09661 255 aaKnown RBP25.5■■□□□ 1.67
PHF1-209ENST00000487667 C1orf115Q9H7X2 142 aa25.5■■□□□ 1.67
PHF1-209ENST00000487667 CDCA7Q9BWT1 371 aaPredicted RBP25.49■■□□□ 1.67
PHF1-209ENST00000487667 DDX21Q9NR30 783 aaKnown RBP eCLIP25.49■■□□□ 1.67
PHF1-209ENST00000487667 GNAI2P04899 355 aa25.49■■□□□ 1.67
PHF1-209ENST00000487667 MEIS3Q99687 375 aa25.49■■□□□ 1.67
PHF1-209ENST00000487667 PLCH1Q4KWH8 1693 aa25.49■■□□□ 1.67
PHF1-209ENST00000487667 ATP10DQ9P241 1426 aa25.48■■□□□ 1.67
PHF1-209ENST00000487667 DDX58O95786 925 aaKnown RBP25.48■■□□□ 1.67
PHF1-209ENST00000487667 PHAXQ9H814 394 aaKnown RBP25.48■■□□□ 1.67
PHF1-209ENST00000487667 SPATA31A6Q5VVP1 1343 aa25.47■■□□□ 1.67
PHF1-209ENST00000487667 SRCIN1Q9C0H9 1055 aa25.47■■□□□ 1.67
PHF1-209ENST00000487667 CEP85Q6P2H3 762 aa25.47■■□□□ 1.67
PHF1-209ENST00000487667 SIRT2Q8IXJ6 389 aa25.47■■□□□ 1.67
PHF1-209ENST00000487667 DNAAF4Q8WXU2 420 aa25.47■■□□□ 1.67
PHF1-209ENST00000487667 USP35Q9P2H5 1018 aa25.47■■□□□ 1.67
PHF1-209ENST00000487667 HDAC5Q9UQL6 1122 aa25.47■■□□□ 1.67
PHF1-209ENST00000487667 SLC39A6Q13433 755 aa25.46■■□□□ 1.67
PHF1-209ENST00000487667 CHD1LQ86WJ1 897 aa25.46■■□□□ 1.67
PHF1-209ENST00000487667 DCTPP1Q9H773 170 aa25.46■■□□□ 1.67
PHF1-209ENST00000487667 DISP2A7MBM2 1401 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms