RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 CHL1O00533 1208 aa21.96■■□□□ 1.11
NF1-211ENST00000487476 CABP4P57796 275 aa21.96■■□□□ 1.11
NF1-211ENST00000487476 GNAI1P63096 354 aa21.96■■□□□ 1.11
NF1-211ENST00000487476 ACSBG1Q96GR2 724 aa21.96■■□□□ 1.11
NF1-211ENST00000487476 EP400Q96L91 3159 aa21.96■■□□□ 1.11
NF1-211ENST00000487476 FANCIQ9NVI1 1328 aa21.96■■□□□ 1.11
NF1-211ENST00000487476 ERVV-2B6SEH9 535 aa21.95■■□□□ 1.1
NF1-211ENST00000487476 SCN11AQ9UI33 1791 aa21.94■■□□□ 1.1
NF1-211ENST00000487476 KCNQ3O43525 872 aa21.94■■□□□ 1.1
NF1-211ENST00000487476 MYH16Q9H6N6 1097 aa21.94■■□□□ 1.1
NF1-211ENST00000487476 TSPYL4Q9UJ04 414 aa21.94■■□□□ 1.1
NF1-211ENST00000487476 TOGARAM1Q9Y4F4 1720 aa21.93■■□□□ 1.1
NF1-211ENST00000487476 BTBD11A6QL63 1104 aa21.93■■□□□ 1.1
NF1-211ENST00000487476 PRIM1P49642 420 aaKnown RBP21.93■■□□□ 1.1
NF1-211ENST00000487476 SLC39A6Q13433 755 aa21.93■■□□□ 1.1
NF1-211ENST00000487476 SYTL4Q96C24 671 aaPredicted RBP21.93■■□□□ 1.1
NF1-211ENST00000487476 KRT27Q7Z3Y8 459 aa21.92■■□□□ 1.1
NF1-211ENST00000487476 RGS12O14924 1447 aa21.92■■□□□ 1.1
NF1-211ENST00000487476 KCNQ2O43526 872 aa21.92■■□□□ 1.1
NF1-211ENST00000487476 VIRMAQ69YN4 1812 aaKnown RBP21.92■■□□□ 1.1
NF1-211ENST00000487476 KRT24Q2M2I5 525 aa21.91■■□□□ 1.1
NF1-211ENST00000487476 PIGBQ92521 554 aa21.91■■□□□ 1.1
NF1-211ENST00000487476 MRC1P22897 1456 aa21.91■■□□□ 1.1
NF1-211ENST00000487476 EXOSC9Q06265 439 aaKnown RBP21.9■■□□□ 1.1
NF1-211ENST00000487476 PTF1AQ7RTS3 328 aa21.9■■□□□ 1.1
NF1-211ENST00000487476 TMOD3Q9NYL9 352 aa21.9■■□□□ 1.1
NF1-211ENST00000487476 BRWD3Q6RI45 1802 aa21.89■■□□□ 1.09
NF1-211ENST00000487476 ELL2O00472 640 aaPredicted RBP21.88■■□□□ 1.09
NF1-211ENST00000487476 TSPYL6Q8N831 410 aa21.88■■□□□ 1.09
NF1-211ENST00000487476 C8orf58Q8NAV2 365 aa21.88■■□□□ 1.09
NF1-211ENST00000487476 SIPA1L3O60292 1781 aaPredicted RBP21.87■■□□□ 1.09
NF1-211ENST00000487476 ZNF790Q6PG37 636 aa21.87■■□□□ 1.09
NF1-211ENST00000487476 BABAM1Q9NWV8 329 aa21.87■■□□□ 1.09
NF1-211ENST00000487476 ASAP1Q9ULH1 1129 aa21.87■■□□□ 1.09
NF1-211ENST00000487476 KAT6BQ8WYB5 2073 aa21.86■■□□□ 1.09
NF1-211ENST00000487476 DOT1LQ8TEK3 1739 aa21.86■■□□□ 1.09
NF1-211ENST00000487476 BCL9O00512 1426 aa21.86■■□□□ 1.09
NF1-211ENST00000487476 EIF4A1P60842 406 aaKnown RBP21.85■■□□□ 1.09
NF1-211ENST00000487476 ATG3Q9NT62 314 aa21.84■■□□□ 1.09
NF1-211ENST00000487476 ITGB4P16144 1822 aa21.83■■□□□ 1.08
NF1-211ENST00000487476 FAM196AQ6ZSG2 479 aa21.82■■□□□ 1.08
NF1-211ENST00000487476 ZNF496Q96IT1 587 aaPredicted RBP21.82■■□□□ 1.08
NF1-211ENST00000487476 PTCD1O75127 700 aaKnown RBP21.81■■□□□ 1.08
NF1-211ENST00000487476 TTC5Q8N0Z6 440 aa21.81■■□□□ 1.08
NF1-211ENST00000487476 KDM3BQ7LBC6 1761 aa21.81■■□□□ 1.08
NF1-211ENST00000487476 PRAMEF22A3QJZ6 481 aa21.81■■□□□ 1.08
NF1-211ENST00000487476 TWISTNBQ3B726 338 aaPredicted RBP21.8■■□□□ 1.08
NF1-211ENST00000487476 TSHZ2Q9NRE2 1034 aa21.8■■□□□ 1.08
NF1-211ENST00000487476 VAMP4O75379 141 aa21.8■■□□□ 1.08
NF1-211ENST00000487476 TRIM37O94972 964 aa21.78■■□□□ 1.08
NF1-211ENST00000487476 HEG1Q9ULI3 1381 aa21.77■■□□□ 1.08
NF1-211ENST00000487476 TCERG1O14776 1098 aaKnown RBP21.77■■□□□ 1.08
NF1-211ENST00000487476 GIGYF1O75420 1035 aaPredicted RBP21.77■■□□□ 1.08
NF1-211ENST00000487476 NECTIN2Q92692 538 aa21.77■■□□□ 1.08
NF1-211ENST00000487476 RCAN3Q9UKA8 241 aa21.77■■□□□ 1.08
NF1-211ENST00000487476 FMNL2Q96PY5 1086 aa21.76■■□□□ 1.07
NF1-211ENST00000487476 RBM42Q9BTD8 480 aaKnown RBP21.76■■□□□ 1.07
NF1-211ENST00000487476 KCPQ6ZWJ8 1503 aa21.76■■□□□ 1.07
NF1-211ENST00000487476 SLC4A9Q96Q91 983 aa21.76■■□□□ 1.07
NF1-211ENST00000487476 BCL2L13Q9BXK5 485 aa21.76■■□□□ 1.07
NF1-211ENST00000487476 BCL11BQ9C0K0 894 aaPredicted RBP21.76■■□□□ 1.07
NF1-211ENST00000487476 PAPPAQ13219 1627 aa21.75■■□□□ 1.07
NF1-211ENST00000487476 BCAR3O75815 825 aa21.74■■□□□ 1.07
NF1-211ENST00000487476 RARSP54136 660 aaKnown RBP21.74■■□□□ 1.07
NF1-211ENST00000487476 SBF2Q86WG5 1849 aa21.74■■□□□ 1.07
NF1-211ENST00000487476 NHSQ6T4R5 1651 aa21.74■■□□□ 1.07
NF1-211ENST00000487476 EIF2S2P20042 333 aaKnown RBP21.73■■□□□ 1.07
NF1-211ENST00000487476 SSH1Q8WYL5 1049 aa21.73■■□□□ 1.07
NF1-211ENST00000487476 USP16Q9Y5T5 823 aa21.73■■□□□ 1.07
NF1-211ENST00000487476 PALLDQ8WX93 1383 aa21.73■■□□□ 1.07
NF1-211ENST00000487476 SNRPA1P09661 255 aaKnown RBP21.72■■□□□ 1.07
NF1-211ENST00000487476 CT47B1P0C2W7 299 aaPredicted RBP21.72■■□□□ 1.07
NF1-211ENST00000487476 FKBP8Q14318 412 aa21.72■■□□□ 1.07
NF1-211ENST00000487476 KCNQ4P56696 695 aa21.71■■□□□ 1.07
NF1-211ENST00000487476 UBR2Q8IWV8 1755 aa21.71■■□□□ 1.07
NF1-211ENST00000487476 HDGFL1Q5TGJ6 251 aa21.7■■□□□ 1.06
NF1-211ENST00000487476 BTAF1O14981 1849 aa21.7■■□□□ 1.06
NF1-211ENST00000487476 SMARCC1Q92922 1105 aaPredicted RBP21.69■■□□□ 1.06
NF1-211ENST00000487476 LOC102724428A0A0B4J2F2 783 aa21.69■■□□□ 1.06
NF1-211ENST00000487476 SIK1P57059 783 aa21.69■■□□□ 1.06
NF1-211ENST00000487476 DNAJC10Q8IXB1 793 aa21.69■■□□□ 1.06
NF1-211ENST00000487476 HOXB7P09629 217 aa21.68■■□□□ 1.06
NF1-211ENST00000487476 SMC4Q9NTJ3 1288 aa21.68■■□□□ 1.06
NF1-211ENST00000487476 PIP4K2AP48426 406 aaPredicted RBP21.67■■□□□ 1.06
NF1-211ENST00000487476 C5P01031 1676 aa21.67■■□□□ 1.06
NF1-211ENST00000487476 ANXA1P04083 346 aa21.67■■□□□ 1.06
NF1-211ENST00000487476 ATP6V1AP38606 617 aa21.67■■□□□ 1.06
NF1-211ENST00000487476 ITPK1Q13572 414 aa21.67■■□□□ 1.06
NF1-211ENST00000487476 VSIG10Q8N0Z9 540 aa21.67■■□□□ 1.06
NF1-211ENST00000487476 SOS1Q07889 1333 aaPredicted RBP21.66■■□□□ 1.06
NF1-211ENST00000487476 PLIN1O60240 522 aa21.66■■□□□ 1.06
NF1-211ENST00000487476 CCDC30Q5VVM6 783 aa21.66■■□□□ 1.06
NF1-211ENST00000487476 MRPL50Q8N5N7 158 aaKnown RBP21.66■■□□□ 1.06
NF1-211ENST00000487476 CHPF2Q9P2E5 772 aa21.66■■□□□ 1.06
NF1-211ENST00000487476 APBA3O96018 575 aa21.65■■□□□ 1.06
NF1-211ENST00000487476 PROSER3Q2NL68 480 aa21.65■■□□□ 1.06
NF1-211ENST00000487476 ALDH1L2Q3SY69 923 aa21.65■■□□□ 1.06
NF1-211ENST00000487476 ZNF428Q96B54 188 aa21.65■■□□□ 1.06
NF1-211ENST00000487476 SLC4A2P04920 1241 aa21.64■■□□□ 1.06
NF1-211ENST00000487476 A1BGP04217 495 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms