RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 SMTNP53814 917 aa8.49□□□□□ -1.05
LINC00888-204ENST00000487386 SLC27A3Q5K4L6 730 aa8.49□□□□□ -1.05
LINC00888-204ENST00000487386 CCDC102BQ68D86 513 aa8.49□□□□□ -1.05
LINC00888-204ENST00000487386 PRICKLE2Q7Z3G6 844 aa8.49□□□□□ -1.05
LINC00888-204ENST00000487386 NPAS3Q8IXF0 933 aa8.49□□□□□ -1.05
LINC00888-204ENST00000487386 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.49□□□□□ -1.05
LINC00888-204ENST00000487386 ZNF358Q9NW07 568 aa8.49□□□□□ -1.05
LINC00888-204ENST00000487386 TERTO14746 1132 aaKnown RBP8.48□□□□□ -1.05
LINC00888-204ENST00000487386 PSME1Q06323 249 aa8.48□□□□□ -1.05
LINC00888-204ENST00000487386 MTFR1Q15390 333 aa8.48□□□□□ -1.05
LINC00888-204ENST00000487386 WDR44Q5JSH3 913 aa8.48□□□□□ -1.05
LINC00888-204ENST00000487386 PPARGC1BQ86YN6 1023 aaKnown RBP8.48□□□□□ -1.05
LINC00888-204ENST00000487386 CCDC97Q96F63 343 aaPredicted RBP8.48□□□□□ -1.05
LINC00888-204ENST00000487386 ZSCAN10Q96SZ4 725 aaPredicted RBP8.48□□□□□ -1.05
LINC00888-204ENST00000487386 FAM196BA6NMK8 535 aa8.47□□□□□ -1.05
LINC00888-204ENST00000487386 POU4F2Q12837 409 aa8.47□□□□□ -1.05
LINC00888-204ENST00000487386 PTK7Q13308 1070 aa8.47□□□□□ -1.05
LINC00888-204ENST00000487386 TLR1Q15399 786 aa8.47□□□□□ -1.05
LINC00888-204ENST00000487386 CRTC2Q53ET0 693 aaPredicted RBP8.47□□□□□ -1.05
LINC00888-204ENST00000487386 NBPF10Q6P3W6 841 aaKnown RBP8.47□□□□□ -1.05
LINC00888-204ENST00000487386 ZNF295-AS1Q8N0V1 137 aa8.47□□□□□ -1.05
LINC00888-204ENST00000487386 NBPF15Q8N660 670 aa8.47□□□□□ -1.05
LINC00888-204ENST00000487386 TPCN2Q8NHX9 752 aa8.47□□□□□ -1.05
LINC00888-204ENST00000487386 SERTAD1Q9UHV2 236 aa8.47□□□□□ -1.05
LINC00888-204ENST00000487386 A6NJY4 79 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 H3BM21 787 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 M0R2N6 131 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 CDK2AP1O14519 115 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 BACH1O14867 736 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 PPFIA3O75145 1194 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 RHOQP17081 205 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 RFX1P22670 979 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 EPHA4P54764 986 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 NFX1Q12986 1120 aaKnown RBP8.46□□□□□ -1.06
LINC00888-204ENST00000487386 LCE2AQ5TA79 106 aaPredicted RBP8.46□□□□□ -1.06
LINC00888-204ENST00000487386 LARP1Q6PKG0 1096 aaKnown RBP8.46□□□□□ -1.06
LINC00888-204ENST00000487386 CCDC82Q8N4S0 544 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 CCDC155Q8N6L0 562 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 ZNF594Q96JF6 807 aaPredicted RBP8.46□□□□□ -1.06
LINC00888-204ENST00000487386 IQSEC3Q9UPP2 1182 aaPredicted RBP8.46□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L15C9J2P7 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L10C9JJH3 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L13C9JLJ4 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L12C9JPN9 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L11C9JVI0 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L21D6R901 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L18D6R9N7 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L22D6RA61 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L17D6RBQ6 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L19D6RCP7 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L20D6RJB6 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 FOXK2Q01167 660 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L24Q0WX57 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 TMEM214Q6NUQ4 689 aaKnown RBP8.44□□□□□ -1.06
LINC00888-204ENST00000487386 TAS1R3Q7RTX0 852 aa8.44□□□□□ -1.06
LINC00888-204ENST00000487386 ARXQ96QS3 562 aa8.44□□□□□ -1.06
LINC00888-204ENST00000487386 SCHIP1Q9P0W5 487 aaPredicted RBP8.44□□□□□ -1.06
LINC00888-204ENST00000487386 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.43□□□□□ -1.06
LINC00888-204ENST00000487386 SFI1A8K8P3 1242 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 VEGFBP49765 207 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 C4orf17Q53FE4 359 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 CDCA8Q53HL2 280 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 GNASQ5JWF2 1037 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 LCE2CQ5TA81 110 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 TREML4Q6UXN2 200 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 ANKMY2Q8IV38 441 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 RHBDD1Q8TEB9 315 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 USP3Q9Y6I4 520 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 SUPT5HO00267 1087 aaKnown RBP8.42□□□□□ -1.06
LINC00888-204ENST00000487386 SEC13P55735 322 aa8.42□□□□□ -1.06
LINC00888-204ENST00000487386 DPYDQ12882 1025 aa8.42□□□□□ -1.06
LINC00888-204ENST00000487386 TNS4Q8IZW8 715 aa8.42□□□□□ -1.06
LINC00888-204ENST00000487386 DYRK1BQ9Y463 629 aa8.42□□□□□ -1.06
LINC00888-204ENST00000487386 GTF2E1P29083 439 aaPredicted RBP8.41□□□□□ -1.06
LINC00888-204ENST00000487386 ELOAQ14241 798 aaKnown RBP8.41□□□□□ -1.06
LINC00888-204ENST00000487386 PBXIP1Q96AQ6 731 aa8.41□□□□□ -1.06
LINC00888-204ENST00000487386 TIMMDC1Q9NPL8 285 aa8.41□□□□□ -1.06
LINC00888-204ENST00000487386 WFS1O76024 890 aa8.4□□□□□ -1.06
LINC00888-204ENST00000487386 ATG7O95352 703 aa8.4□□□□□ -1.06
LINC00888-204ENST00000487386 VSIG8P0DPA2 414 aa8.4□□□□□ -1.06
LINC00888-204ENST00000487386 ITGA6P23229 1130 aa8.4□□□□□ -1.06
LINC00888-204ENST00000487386 PHKA2P46019 1235 aa8.4□□□□□ -1.06
LINC00888-204ENST00000487386 TSEN2Q8NCE0 465 aaKnown RBP8.4□□□□□ -1.06
LINC00888-204ENST00000487386 SLC16A10Q8TF71 515 aa8.4□□□□□ -1.06
LINC00888-204ENST00000487386 NANOS1Q8WY41 292 aaKnown RBP8.4□□□□□ -1.06
LINC00888-204ENST00000487386 NIFKQ9BYG3 293 aaKnown RBP8.4□□□□□ -1.06
LINC00888-204ENST00000487386 CUEDC1Q9NWM3 386 aaPredicted RBP8.39□□□□□ -1.07
LINC00888-204ENST00000487386 RBM19Q9Y4C8 960 aaKnown RBP8.39□□□□□ -1.07
LINC00888-204ENST00000487386 ERBB4Q15303 1308 aa8.38□□□□□ -1.07
LINC00888-204ENST00000487386 POTEAQ6S8J7 498 aa8.38□□□□□ -1.07
LINC00888-204ENST00000487386 SLC9A9Q8IVB4 645 aa8.38□□□□□ -1.07
LINC00888-204ENST00000487386 FAM200AQ8TCP9 573 aa8.38□□□□□ -1.07
LINC00888-204ENST00000487386 ZMIZ1Q9ULJ6 1067 aa8.38□□□□□ -1.07
LINC00888-204ENST00000487386 NOVA2Q9UNW9 492 aaKnown RBP8.38□□□□□ -1.07
LINC00888-204ENST00000487386 A0A1B0GTH6 734 aa8.37□□□□□ -1.07
LINC00888-204ENST00000487386 F11P03951 625 aa8.37□□□□□ -1.07
LINC00888-204ENST00000487386 TEAD4Q15561 434 aa8.37□□□□□ -1.07
LINC00888-204ENST00000487386 ZDHHC1Q8WTX9 485 aa8.37□□□□□ -1.07
LINC00888-204ENST00000487386 TSPAN10Q9H1Z9 355 aaPredicted RBP8.37□□□□□ -1.07
LINC00888-204ENST00000487386 C21orf2O43822 256 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms