RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 PLEKHD1A6NEE1 506 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 FAM196BA6NMK8 535 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 USP17L15C9J2P7 530 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 USP17L10C9JJH3 530 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 USP17L13C9JLJ4 530 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 USP17L12C9JPN9 530 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 USP17L11C9JVI0 530 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 USP17L21D6R901 530 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 USP17L18D6R9N7 530 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 USP17L22D6RA61 530 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 USP17L17D6RBQ6 530 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 USP17L19D6RCP7 530 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 USP17L20D6RJB6 530 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 USP17L24Q0WX57 530 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 CRTC2Q53ET0 693 aaPredicted RBP9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 TRIM50Q86XT4 487 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 AEBP1Q8IUX7 1158 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 PLA2G2EQ9NZK7 142 aa9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 NOVA2Q9UNW9 492 aaKnown RBP9.7□□□□□ -0.86
RTFDC1-209ENST00000487211 ELOAQ14241 798 aaKnown RBP9.69□□□□□ -0.86
RTFDC1-209ENST00000487211 INTS6LQ5JSJ4 861 aaKnown RBP9.69□□□□□ -0.86
RTFDC1-209ENST00000487211 ZCCHC11Q5TAX3 1644 aaKnown RBP9.69□□□□□ -0.86
RTFDC1-209ENST00000487211 CCDC125Q86Z20 511 aa9.69□□□□□ -0.86
RTFDC1-209ENST00000487211 OGFOD1Q8N543 542 aa9.69□□□□□ -0.86
RTFDC1-209ENST00000487211 MADDQ8WXG6 1647 aa9.69□□□□□ -0.86
RTFDC1-209ENST00000487211 TLL2Q9Y6L7 1015 aa9.69□□□□□ -0.86
RTFDC1-209ENST00000487211 GLI2P10070 1586 aa9.68□□□□□ -0.86
RTFDC1-209ENST00000487211 CASKIN1Q8WXD9 1431 aa9.68□□□□□ -0.86
RTFDC1-209ENST00000487211 ZBTB7CA1YPR0 619 aa9.68□□□□□ -0.86
RTFDC1-209ENST00000487211 ATP1A2P50993 1020 aa9.68□□□□□ -0.86
RTFDC1-209ENST00000487211 PTK7Q13308 1070 aa9.68□□□□□ -0.86
RTFDC1-209ENST00000487211 KCTD17Q8N5Z5 321 aa9.68□□□□□ -0.86
RTFDC1-209ENST00000487211 ZMIZ1Q9ULJ6 1067 aa9.68□□□□□ -0.86
RTFDC1-209ENST00000487211 FSHRP23945 695 aa9.67□□□□□ -0.86
RTFDC1-209ENST00000487211 GTF2IP78347 998 aa9.67□□□□□ -0.86
RTFDC1-209ENST00000487211 CLDN10P78369 228 aa9.67□□□□□ -0.86
RTFDC1-209ENST00000487211 USP4Q13107 963 aa9.67□□□□□ -0.86
RTFDC1-209ENST00000487211 STK32AQ8WU08 396 aa9.67□□□□□ -0.86
RTFDC1-209ENST00000487211 SIRT1Q96EB6 747 aa9.67□□□□□ -0.86
RTFDC1-209ENST00000487211 CDK15Q96Q40 435 aa9.67□□□□□ -0.86
RTFDC1-209ENST00000487211 DNAAF2Q9NVR5 837 aaKnown RBP9.67□□□□□ -0.86
RTFDC1-209ENST00000487211 RGS17Q9UGC6 210 aaPredicted RBP9.67□□□□□ -0.86
RTFDC1-209ENST00000487211 SETD1AO15047 1707 aaKnown RBP9.67□□□□□ -0.86
RTFDC1-209ENST00000487211 EPRSP07814 1512 aaKnown RBP9.66□□□□□ -0.86
RTFDC1-209ENST00000487211 CDK13Q14004 1512 aaKnown RBP9.66□□□□□ -0.86
RTFDC1-209ENST00000487211 WDR7Q9Y4E6 1490 aa9.66□□□□□ -0.86
RTFDC1-209ENST00000487211 TMEM88BA6NKF7 163 aa9.66□□□□□ -0.86
RTFDC1-209ENST00000487211 ERVH48-1M5A8F1 160 aa9.66□□□□□ -0.86
RTFDC1-209ENST00000487211 WNT7AO00755 349 aa9.66□□□□□ -0.86
RTFDC1-209ENST00000487211 SIAH2O43255 324 aa9.66□□□□□ -0.86
RTFDC1-209ENST00000487211 TMEM164Q5U3C3 297 aa9.66□□□□□ -0.86
RTFDC1-209ENST00000487211 SPRYD7Q5W111 196 aa9.66□□□□□ -0.86
RTFDC1-209ENST00000487211 ZNF594Q96JF6 807 aaPredicted RBP9.66□□□□□ -0.86
RTFDC1-209ENST00000487211 MRGPRX2Q96LB1 330 aa9.66□□□□□ -0.86
RTFDC1-209ENST00000487211 IQSEC2Q5JU85 1478 aa9.66□□□□□ -0.86
RTFDC1-209ENST00000487211 A0A0G2JS52 829 aa9.65□□□□□ -0.86
RTFDC1-209ENST00000487211 ANKMY2Q8IV38 441 aa9.65□□□□□ -0.86
RTFDC1-209ENST00000487211 FAM200AQ8TCP9 573 aa9.65□□□□□ -0.86
RTFDC1-209ENST00000487211 CDK11AQ9UQ88 783 aaPredicted RBP9.65□□□□□ -0.86
RTFDC1-209ENST00000487211 MYCP01106 439 aaPredicted RBP9.64□□□□□ -0.87
RTFDC1-209ENST00000487211 GRM5P41594 1212 aa9.64□□□□□ -0.87
RTFDC1-209ENST00000487211 PSME1Q06323 249 aa9.64□□□□□ -0.87
RTFDC1-209ENST00000487211 DPYDQ12882 1025 aa9.64□□□□□ -0.87
RTFDC1-209ENST00000487211 LARGE2Q8N3Y3 721 aa9.64□□□□□ -0.87
RTFDC1-209ENST00000487211 MPNDQ8N594 471 aa9.64□□□□□ -0.87
RTFDC1-209ENST00000487211 ESF1Q9H501 851 aaKnown RBP9.64□□□□□ -0.87
RTFDC1-209ENST00000487211 PODXL2Q9NZ53 605 aa9.64□□□□□ -0.87
RTFDC1-209ENST00000487211 MAP3K4Q9Y6R4 1608 aa9.64□□□□□ -0.87
RTFDC1-209ENST00000487211 ZBTB7BO15156 539 aaPredicted RBP9.63□□□□□ -0.87
RTFDC1-209ENST00000487211 ADH1CP00326 375 aa9.63□□□□□ -0.87
RTFDC1-209ENST00000487211 ZNF697Q5TEC3 545 aa9.63□□□□□ -0.87
RTFDC1-209ENST00000487211 KIAA1024Q9UPX6 916 aa9.63□□□□□ -0.87
RTFDC1-209ENST00000487211 BCORL1Q5H9F3 1711 aa9.62□□□□□ -0.87
RTFDC1-209ENST00000487211 FYCO1Q9BQS8 1478 aa9.62□□□□□ -0.87
RTFDC1-209ENST00000487211 SCTRP47872 440 aa9.62□□□□□ -0.87
RTFDC1-209ENST00000487211 DHX9Q08211 1270 aaKnown RBP9.62□□□□□ -0.87
RTFDC1-209ENST00000487211 FOXC1Q12948 553 aa9.62□□□□□ -0.87
RTFDC1-209ENST00000487211 ZNF598Q86UK7 904 aaKnown RBP9.62□□□□□ -0.87
RTFDC1-209ENST00000487211 PRKD2Q9BZL6 878 aa9.62□□□□□ -0.87
RTFDC1-209ENST00000487211 TMPRSS4Q9NRS4 437 aa9.62□□□□□ -0.87
RTFDC1-209ENST00000487211 RBM19Q9Y4C8 960 aaKnown RBP9.62□□□□□ -0.87
RTFDC1-209ENST00000487211 VPS8Q8N3P4 1428 aa9.62□□□□□ -0.87
RTFDC1-209ENST00000487211 HECW1Q76N89 1606 aa9.61□□□□□ -0.87
RTFDC1-209ENST00000487211 BRD1O95696 1058 aa9.61□□□□□ -0.87
RTFDC1-209ENST00000487211 CCDC102BQ68D86 513 aa9.61□□□□□ -0.87
RTFDC1-209ENST00000487211 CCDC116Q8IYX3 515 aa9.61□□□□□ -0.87
RTFDC1-209ENST00000487211 CYLDQ9NQC7 956 aa9.61□□□□□ -0.87
RTFDC1-209ENST00000487211 PCDHGA11Q9Y5H2 935 aa9.61□□□□□ -0.87
RTFDC1-209ENST00000487211 CD109Q6YHK3 1445 aa9.61□□□□□ -0.87
RTFDC1-209ENST00000487211 NR5A1Q13285 461 aa9.6□□□□□ -0.87
RTFDC1-209ENST00000487211 CC2D2BQ6DHV5 1058 aa9.6□□□□□ -0.87
RTFDC1-209ENST00000487211 SIX5Q8N196 739 aa9.6□□□□□ -0.87
RTFDC1-209ENST00000487211 TPCN2Q8NHX9 752 aa9.6□□□□□ -0.87
RTFDC1-209ENST00000487211 TRIM52Q96A61 297 aa9.6□□□□□ -0.87
RTFDC1-209ENST00000487211 LRRIQ1Q96JM4 1722 aa9.59□□□□□ -0.87
RTFDC1-209ENST00000487211 TROQ12816 1431 aaPredicted RBP9.59□□□□□ -0.87
RTFDC1-209ENST00000487211 RIMS1Q86UR5 1692 aaKnown RBP9.59□□□□□ -0.87
RTFDC1-209ENST00000487211 ALDH1A1P00352 501 aa9.59□□□□□ -0.87
RTFDC1-209ENST00000487211 HSPA1LP34931 641 aa9.59□□□□□ -0.87
RTFDC1-209ENST00000487211 ERVK-9P63128 1117 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms