RNA–Protein interactions for RNA: ENST00000487154.1

STAG3L1-203, Transcript of stromal antigen 3-like 1 (pseudogene), humanhuman

TSL 4

Gene STAG3L1, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3L1-203ENST00000487154 CFAP44Q96MT7 982 aa13.37□□□□□ -0.27
STAG3L1-203ENST00000487154 SLC52A2Q9HAB3 445 aa13.37□□□□□ -0.27
STAG3L1-203ENST00000487154 BABAM1Q9NWV8 329 aa13.37□□□□□ -0.27
STAG3L1-203ENST00000487154 RGS12O14924 1447 aa13.36□□□□□ -0.27
STAG3L1-203ENST00000487154 ITGB4P16144 1822 aa13.36□□□□□ -0.27
STAG3L1-203ENST00000487154 KDM3BQ7LBC6 1761 aa13.35□□□□□ -0.27
STAG3L1-203ENST00000487154 ZNF853P0CG23 659 aa13.35□□□□□ -0.27
STAG3L1-203ENST00000487154 KRT27Q7Z3Y8 459 aa13.35□□□□□ -0.27
STAG3L1-203ENST00000487154 SPINK5Q9NQ38 1064 aaPredicted RBP13.35□□□□□ -0.27
STAG3L1-203ENST00000487154 TMOD3Q9NYL9 352 aa13.35□□□□□ -0.27
STAG3L1-203ENST00000487154 TSPYL4Q9UJ04 414 aa13.35□□□□□ -0.27
STAG3L1-203ENST00000487154 BCL9O00512 1426 aa13.35□□□□□ -0.27
STAG3L1-203ENST00000487154 FANCIQ9NVI1 1328 aa13.35□□□□□ -0.27
STAG3L1-203ENST00000487154 BTBD11A6QL63 1104 aa13.34□□□□□ -0.27
STAG3L1-203ENST00000487154 CHL1O00533 1208 aa13.34□□□□□ -0.27
STAG3L1-203ENST00000487154 DUSP27Q5VZP5 1158 aa13.34□□□□□ -0.27
STAG3L1-203ENST00000487154 TRMT2AQ8IZ69 625 aaKnown RBP13.34□□□□□ -0.27
STAG3L1-203ENST00000487154 MBIPQ9NS73 344 aa13.34□□□□□ -0.27
STAG3L1-203ENST00000487154 NFATC2IPQ8NCF5 419 aa13.33□□□□□ -0.28
STAG3L1-203ENST00000487154 TSR2Q969E8 191 aaKnown RBP13.33□□□□□ -0.28
STAG3L1-203ENST00000487154 NHSQ6T4R5 1651 aa13.32□□□□□ -0.28
STAG3L1-203ENST00000487154 SYTL4Q96C24 671 aaPredicted RBP13.32□□□□□ -0.28
STAG3L1-203ENST00000487154 PAPPAQ13219 1627 aa13.31□□□□□ -0.28
STAG3L1-203ENST00000487154 PRIM1P49642 420 aaKnown RBP13.31□□□□□ -0.28
STAG3L1-203ENST00000487154 FAM196AQ6ZSG2 479 aa13.31□□□□□ -0.28
STAG3L1-203ENST00000487154 TTC5Q8N0Z6 440 aa13.31□□□□□ -0.28
STAG3L1-203ENST00000487154 ACSBG1Q96GR2 724 aa13.31□□□□□ -0.28
STAG3L1-203ENST00000487154 MIS18AQ9NYP9 233 aa13.31□□□□□ -0.28
STAG3L1-203ENST00000487154 SBF2Q86WG5 1849 aa13.31□□□□□ -0.28
STAG3L1-203ENST00000487154 CT47B1P0C2W7 299 aaPredicted RBP13.29□□□□□ -0.28
STAG3L1-203ENST00000487154 EXOSC9Q06265 439 aaKnown RBP13.29□□□□□ -0.28
STAG3L1-203ENST00000487154 FAM182BQ5T319 152 aa13.29□□□□□ -0.28
STAG3L1-203ENST00000487154 ZNF790Q6PG37 636 aa13.29□□□□□ -0.28
STAG3L1-203ENST00000487154 PIGBQ92521 554 aa13.29□□□□□ -0.28
STAG3L1-203ENST00000487154 UBR2Q8IWV8 1755 aa13.29□□□□□ -0.28
STAG3L1-203ENST00000487154 SLC39A6Q13433 755 aa13.28□□□□□ -0.28
STAG3L1-203ENST00000487154 SOS1Q07889 1333 aaPredicted RBP13.28□□□□□ -0.28
STAG3L1-203ENST00000487154 BTAF1O14981 1849 aa13.27□□□□□ -0.28
STAG3L1-203ENST00000487154 EIF4A1P60842 406 aaKnown RBP13.27□□□□□ -0.29
STAG3L1-203ENST00000487154 SMARCC1Q92922 1105 aaPredicted RBP13.27□□□□□ -0.29
STAG3L1-203ENST00000487154 FMNL2Q96PY5 1086 aa13.27□□□□□ -0.29
STAG3L1-203ENST00000487154 KCNQ3O43525 872 aa13.26□□□□□ -0.29
STAG3L1-203ENST00000487154 KCNQ2O43526 872 aa13.26□□□□□ -0.29
STAG3L1-203ENST00000487154 HOXB7P09629 217 aa13.26□□□□□ -0.29
STAG3L1-203ENST00000487154 TWISTNBQ3B726 338 aaPredicted RBP13.26□□□□□ -0.29
STAG3L1-203ENST00000487154 KCPQ6ZWJ8 1503 aa13.26□□□□□ -0.29
STAG3L1-203ENST00000487154 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
STAG3L1-203ENST00000487154 C8orf58Q8NAV2 365 aa13.25□□□□□ -0.29
STAG3L1-203ENST00000487154 ZNF428Q96B54 188 aa13.25□□□□□ -0.29
STAG3L1-203ENST00000487154 BCL11BQ9C0K0 894 aaPredicted RBP13.25□□□□□ -0.29
STAG3L1-203ENST00000487154 ATG3Q9NT62 314 aa13.25□□□□□ -0.29
STAG3L1-203ENST00000487154 ASAP1Q9ULH1 1129 aa13.25□□□□□ -0.29
STAG3L1-203ENST00000487154 PALLDQ8WX93 1383 aa13.24□□□□□ -0.29
STAG3L1-203ENST00000487154 HEG1Q9ULI3 1381 aa13.24□□□□□ -0.29
STAG3L1-203ENST00000487154 ZNF496Q96IT1 587 aaPredicted RBP13.24□□□□□ -0.29
STAG3L1-203ENST00000487154 LAMB4A4D0S4 1761 aa13.24□□□□□ -0.29
STAG3L1-203ENST00000487154 ELL2O00472 640 aaPredicted RBP13.23□□□□□ -0.29
STAG3L1-203ENST00000487154 SNRPA1P09661 255 aaKnown RBP13.23□□□□□ -0.29
STAG3L1-203ENST00000487154 KRT24Q2M2I5 525 aa13.23□□□□□ -0.29
STAG3L1-203ENST00000487154 TSPYL6Q8N831 410 aa13.23□□□□□ -0.29
STAG3L1-203ENST00000487154 RBM42Q9BTD8 480 aaKnown RBP13.23□□□□□ -0.29
STAG3L1-203ENST00000487154 RCAN3Q9UKA8 241 aa13.23□□□□□ -0.29
STAG3L1-203ENST00000487154 C5P01031 1676 aa13.23□□□□□ -0.29
STAG3L1-203ENST00000487154 CACNA1FO60840 1977 aa13.22□□□□□ -0.29
STAG3L1-203ENST00000487154 PTCD1O75127 700 aaKnown RBP13.22□□□□□ -0.29
STAG3L1-203ENST00000487154 VAMP4O75379 141 aa13.22□□□□□ -0.29
STAG3L1-203ENST00000487154 GIGYF1O75420 1035 aaPredicted RBP13.22□□□□□ -0.29
STAG3L1-203ENST00000487154 TRIM37O94972 964 aa13.22□□□□□ -0.29
STAG3L1-203ENST00000487154 VSIG10Q8N0Z9 540 aa13.22□□□□□ -0.29
STAG3L1-203ENST00000487154 CICQ96RK0 1608 aaPredicted RBP13.21□□□□□ -0.29
STAG3L1-203ENST00000487154 ALDH1L2Q3SY69 923 aa13.21□□□□□ -0.29
STAG3L1-203ENST00000487154 HDGFL1Q5TGJ6 251 aa13.21□□□□□ -0.29
STAG3L1-203ENST00000487154 TEX13AQ9BXU3 409 aaPredicted RBP13.21□□□□□ -0.29
STAG3L1-203ENST00000487154 ZNF831Q5JPB2 1677 aa13.21□□□□□ -0.3
STAG3L1-203ENST00000487154 LY75O60449 1722 aa13.2□□□□□ -0.3
STAG3L1-203ENST00000487154 TNS1Q9HBL0 1735 aaKnown RBP13.2□□□□□ -0.3
STAG3L1-203ENST00000487154 RARSP54136 660 aaKnown RBP13.2□□□□□ -0.3
STAG3L1-203ENST00000487154 CCDC30Q5VVM6 783 aa13.2□□□□□ -0.3
STAG3L1-203ENST00000487154 PTF1AQ7RTS3 328 aa13.2□□□□□ -0.3
STAG3L1-203ENST00000487154 STK31Q9BXU1 1019 aa13.2□□□□□ -0.3
STAG3L1-203ENST00000487154 SMC4Q9NTJ3 1288 aa13.2□□□□□ -0.3
STAG3L1-203ENST00000487154 TJP1Q07157 1748 aa13.19□□□□□ -0.3
STAG3L1-203ENST00000487154 LOC102724428A0A0B4J2F2 783 aa13.19□□□□□ -0.3
STAG3L1-203ENST00000487154 EIF2S2P20042 333 aaKnown RBP13.19□□□□□ -0.3
STAG3L1-203ENST00000487154 SIK1P57059 783 aa13.19□□□□□ -0.3
STAG3L1-203ENST00000487154 ATP6V1AP38606 617 aa13.18□□□□□ -0.3
STAG3L1-203ENST00000487154 SSH1Q8WYL5 1049 aa13.18□□□□□ -0.3
STAG3L1-203ENST00000487154 RGPD3A6NKT7 1758 aaPredicted RBP13.17□□□□□ -0.3
STAG3L1-203ENST00000487154 RGPD4Q7Z3J3 1758 aa13.17□□□□□ -0.3
STAG3L1-203ENST00000487154 ERBB4Q15303 1308 aa13.17□□□□□ -0.3
STAG3L1-203ENST00000487154 KIF16BQ96L93 1317 aa13.17□□□□□ -0.3
STAG3L1-203ENST00000487154 PRAMEF22A3QJZ6 481 aa13.17□□□□□ -0.3
STAG3L1-203ENST00000487154 STARD3NLO95772 234 aa13.17□□□□□ -0.3
STAG3L1-203ENST00000487154 HMGB2P26583 209 aaKnown RBP13.17□□□□□ -0.3
STAG3L1-203ENST00000487154 DNAJC10Q8IXB1 793 aa13.17□□□□□ -0.3
STAG3L1-203ENST00000487154 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.17□□□□□ -0.3
STAG3L1-203ENST00000487154 NECTIN2Q92692 538 aa13.17□□□□□ -0.3
STAG3L1-203ENST00000487154 BCL2L13Q9BXK5 485 aa13.17□□□□□ -0.3
STAG3L1-203ENST00000487154 APBA3O96018 575 aa13.16□□□□□ -0.3
STAG3L1-203ENST00000487154 SF3B2Q13435 895 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms