RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 CABP4P57796 275 aa25.82■■□□□ 1.72
CLIP2-206ENST00000487091 LINC00116Q8NCU8 138 aa25.82■■□□□ 1.72
CLIP2-206ENST00000487091 UBR3Q6ZT12 1888 aa25.81■■□□□ 1.72
CLIP2-206ENST00000487091 ITPK1Q13572 414 aa25.8■■□□□ 1.72
CLIP2-206ENST00000487091 AKAP4Q5JQC9 854 aa25.8■■□□□ 1.72
CLIP2-206ENST00000487091 ZNF831Q5JPB2 1677 aa25.78■■□□□ 1.72
CLIP2-206ENST00000487091 HMOX1P09601 288 aa25.78■■□□□ 1.72
CLIP2-206ENST00000487091 SSFA2P28290 1259 aa25.78■■□□□ 1.72
CLIP2-206ENST00000487091 AMIGO3Q86WK7 504 aa25.78■■□□□ 1.72
CLIP2-206ENST00000487091 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.77■■□□□ 1.72
CLIP2-206ENST00000487091 CNGB1Q14028 1251 aaPredicted RBP25.77■■□□□ 1.72
CLIP2-206ENST00000487091 YY1P25490 414 aa25.76■■□□□ 1.71
CLIP2-206ENST00000487091 NFATC2IPQ8NCF5 419 aa25.76■■□□□ 1.71
CLIP2-206ENST00000487091 RBM42Q9BTD8 480 aaKnown RBP25.76■■□□□ 1.71
CLIP2-206ENST00000487091 SCN11AQ9UI33 1791 aa25.75■■□□□ 1.71
CLIP2-206ENST00000487091 COL3A1P02461 1466 aaPredicted RBP25.75■■□□□ 1.71
CLIP2-206ENST00000487091 PHF14O94880 888 aa25.75■■□□□ 1.71
CLIP2-206ENST00000487091 MSL1Q68DK7 614 aa25.75■■□□□ 1.71
CLIP2-206ENST00000487091 SLC4A9Q96Q91 983 aa25.75■■□□□ 1.71
CLIP2-206ENST00000487091 KLHL34Q8N239 644 aa25.74■■□□□ 1.71
CLIP2-206ENST00000487091 GNPATO15228 680 aa25.73■■□□□ 1.71
CLIP2-206ENST00000487091 RC3H1Q5TC82 1133 aaKnown RBP25.73■■□□□ 1.71
CLIP2-206ENST00000487091 SMIM5Q71RC9 77 aa25.72■■□□□ 1.71
CLIP2-206ENST00000487091 MTHFSDQ2M296 383 aaKnown RBP25.71■■□□□ 1.71
CLIP2-206ENST00000487091 SLC52A2Q9HAB3 445 aa25.7■■□□□ 1.7
CLIP2-206ENST00000487091 LGR6Q9HBX8 967 aa25.7■■□□□ 1.7
CLIP2-206ENST00000487091 CNTNAP4Q9C0A0 1308 aa25.69■■□□□ 1.7
CLIP2-206ENST00000487091 U2SURPO15042 1029 aaKnown RBP25.69■■□□□ 1.7
CLIP2-206ENST00000487091 RNMTO43148 476 aaKnown RBP25.69■■□□□ 1.7
CLIP2-206ENST00000487091 CFAP53Q96M91 514 aa25.69■■□□□ 1.7
CLIP2-206ENST00000487091 RTCBQ9Y3I0 505 aaKnown RBP25.69■■□□□ 1.7
CLIP2-206ENST00000487091 PTCD1O75127 700 aaKnown RBP25.68■■□□□ 1.7
CLIP2-206ENST00000487091 NLGN2Q8NFZ4 835 aa25.68■■□□□ 1.7
CLIP2-206ENST00000487091 COL5A3P25940 1745 aaPredicted RBP25.68■■□□□ 1.7
CLIP2-206ENST00000487091 ADRA2BP18089 450 aa25.67■■□□□ 1.7
CLIP2-206ENST00000487091 GPR162Q16538 588 aa25.67■■□□□ 1.7
CLIP2-206ENST00000487091 CD2APQ9Y5K6 639 aa25.67■■□□□ 1.7
CLIP2-206ENST00000487091 TRAPPC3LQ5T215 181 aa25.66■■□□□ 1.7
CLIP2-206ENST00000487091 MRC1P22897 1456 aa25.66■■□□□ 1.7
CLIP2-206ENST00000487091 VIRMAQ69YN4 1812 aaKnown RBP25.65■■□□□ 1.7
CLIP2-206ENST00000487091 RPS6KA4O75676 772 aa25.65■■□□□ 1.7
CLIP2-206ENST00000487091 ADAMTS7Q9UKP4 1686 aa25.64■■□□□ 1.7
CLIP2-206ENST00000487091 PPP2R1AP30153 589 aa25.64■■□□□ 1.7
CLIP2-206ENST00000487091 CHD4Q14839 1912 aa25.64■■□□□ 1.69
CLIP2-206ENST00000487091 UTRNP46939 3433 aa25.64■■□□□ 1.69
CLIP2-206ENST00000487091 MYH14Q7Z406 1995 aaKnown RBP25.64■■□□□ 1.69
CLIP2-206ENST00000487091 GAS2L2Q8NHY3 880 aa25.63■■□□□ 1.69
CLIP2-206ENST00000487091 CICQ96RK0 1608 aaPredicted RBP25.63■■□□□ 1.69
CLIP2-206ENST00000487091 NUDCQ9Y266 331 aa25.62■■□□□ 1.69
CLIP2-206ENST00000487091 ARHGEF1Q92888 912 aaKnown RBP25.61■■□□□ 1.69
CLIP2-206ENST00000487091 CRKLP46109 303 aaKnown RBP25.6■■□□□ 1.69
CLIP2-206ENST00000487091 NLGN1Q8N2Q7 840 aa25.6■■□□□ 1.69
CLIP2-206ENST00000487091 RFC4P35249 363 aa25.59■■□□□ 1.69
CLIP2-206ENST00000487091 TJP1Q07157 1748 aa25.59■■□□□ 1.69
CLIP2-206ENST00000487091 GNAT3A8MTJ3 354 aa25.58■■□□□ 1.69
CLIP2-206ENST00000487091 SLC39A6Q13433 755 aa25.58■■□□□ 1.69
CLIP2-206ENST00000487091 PELP1Q8IZL8 1130 aaKnown RBP25.58■■□□□ 1.69
CLIP2-206ENST00000487091 RSPH6AQ9H0K4 717 aa25.58■■□□□ 1.69
CLIP2-206ENST00000487091 GRIN3BO60391 1043 aa25.56■■□□□ 1.68
CLIP2-206ENST00000487091 MMP10P09238 476 aa25.56■■□□□ 1.68
CLIP2-206ENST00000487091 PRKAR2BP31323 418 aa25.56■■□□□ 1.68
CLIP2-206ENST00000487091 DNAJC10Q8IXB1 793 aa25.56■■□□□ 1.68
CLIP2-206ENST00000487091 IL17REQ8NFR9 667 aa25.56■■□□□ 1.68
CLIP2-206ENST00000487091 GYS1P13807 737 aa25.55■■□□□ 1.68
CLIP2-206ENST00000487091 INTS5Q6P9B9 1019 aaKnown RBP25.55■■□□□ 1.68
CLIP2-206ENST00000487091 VSIG10Q8N0Z9 540 aa25.55■■□□□ 1.68
CLIP2-206ENST00000487091 GOLGB1Q14789 3259 aaKnown RBP25.55■■□□□ 1.68
CLIP2-206ENST00000487091 KCPQ6ZWJ8 1503 aa25.54■■□□□ 1.68
CLIP2-206ENST00000487091 U2AF1L5P0DN76 240 aaPredicted RBP25.54■■□□□ 1.68
CLIP2-206ENST00000487091 U2AF1Q01081 240 aaKnown RBP eCLIP25.54■■□□□ 1.68
CLIP2-206ENST00000487091 PHACTR3Q96KR7 559 aa25.54■■□□□ 1.68
CLIP2-206ENST00000487091 FCHSD2O94868 740 aa25.53■■□□□ 1.68
CLIP2-206ENST00000487091 YBX3P16989 372 aaKnown RBP eCLIP25.53■■□□□ 1.68
CLIP2-206ENST00000487091 TEFQ10587 303 aa25.53■■□□□ 1.68
CLIP2-206ENST00000487091 CCDC87Q9NVE4 849 aa25.53■■□□□ 1.68
CLIP2-206ENST00000487091 C4AP0C0L4 1744 aa25.52■■□□□ 1.68
CLIP2-206ENST00000487091 CYP19A1P11511 503 aaPredicted RBP25.52■■□□□ 1.68
CLIP2-206ENST00000487091 TTC5Q8N0Z6 440 aa25.51■■□□□ 1.67
CLIP2-206ENST00000487091 UBR2Q8IWV8 1755 aa25.5■■□□□ 1.67
CLIP2-206ENST00000487091 ZNF784Q8NCA9 323 aaPredicted RBP25.5■■□□□ 1.67
CLIP2-206ENST00000487091 CEMIPQ8WUJ3 1361 aa25.5■■□□□ 1.67
CLIP2-206ENST00000487091 USP42Q9H9J4 1324 aaKnown RBP25.5■■□□□ 1.67
CLIP2-206ENST00000487091 SOS1Q07889 1333 aaPredicted RBP25.48■■□□□ 1.67
CLIP2-206ENST00000487091 ZNF790Q6PG37 636 aa25.48■■□□□ 1.67
CLIP2-206ENST00000487091 SIPA1L3O60292 1781 aaPredicted RBP25.48■■□□□ 1.67
CLIP2-206ENST00000487091 KIF13BQ9NQT8 1826 aa25.47■■□□□ 1.67
CLIP2-206ENST00000487091 SRP68Q9UHB9 627 aaKnown RBP25.47■■□□□ 1.67
CLIP2-206ENST00000487091 PARP3Q9Y6F1 533 aa25.47■■□□□ 1.67
CLIP2-206ENST00000487091 STARD3NLO95772 234 aa25.45■■□□□ 1.66
CLIP2-206ENST00000487091 TGFB2P61812 414 aa25.45■■□□□ 1.66
CLIP2-206ENST00000487091 ZNF496Q96IT1 587 aaPredicted RBP25.45■■□□□ 1.66
CLIP2-206ENST00000487091 TEX13AQ9BXU3 409 aaPredicted RBP25.45■■□□□ 1.66
CLIP2-206ENST00000487091 ZPR1O75312 459 aa25.44■■□□□ 1.66
CLIP2-206ENST00000487091 FKBP8Q14318 412 aa25.44■■□□□ 1.66
CLIP2-206ENST00000487091 ZBTB1Q9Y2K1 713 aa25.44■■□□□ 1.66
CLIP2-206ENST00000487091 HEG1Q9ULI3 1381 aa25.44■■□□□ 1.66
CLIP2-206ENST00000487091 HTATSF1O43719 755 aaKnown RBP25.43■■□□□ 1.66
CLIP2-206ENST00000487091 RTF1Q92541 710 aaKnown RBP25.43■■□□□ 1.66
CLIP2-206ENST00000487091 C10orf71Q711Q0 1435 aa25.43■■□□□ 1.66
CLIP2-206ENST00000487091 FMNL2Q96PY5 1086 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms