RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 PHKG2P15735 406 aa12.18□□□□□ -0.46
POLR1A-208ENST00000486964 HAP1P54257 671 aaPredicted RBP12.18□□□□□ -0.46
POLR1A-208ENST00000486964 KRT24Q2M2I5 525 aa12.18□□□□□ -0.46
POLR1A-208ENST00000486964 ZKSCAN2Q63HK3 967 aa12.18□□□□□ -0.46
POLR1A-208ENST00000486964 LARP1Q6PKG0 1096 aaKnown RBP12.18□□□□□ -0.46
POLR1A-208ENST00000486964 BCL2L13Q9BXK5 485 aa12.18□□□□□ -0.46
POLR1A-208ENST00000486964 RNF39Q9H2S5 420 aa12.18□□□□□ -0.46
POLR1A-208ENST00000486964 SMC4Q9NTJ3 1288 aa12.18□□□□□ -0.46
POLR1A-208ENST00000486964 TSPYL4Q9UJ04 414 aa12.18□□□□□ -0.46
POLR1A-208ENST00000486964 ADAMTS7Q9UKP4 1686 aa12.17□□□□□ -0.46
POLR1A-208ENST00000486964 CYP27B1O15528 508 aa12.17□□□□□ -0.46
POLR1A-208ENST00000486964 C1orf141Q5JVX7 400 aa12.17□□□□□ -0.46
POLR1A-208ENST00000486964 MPRIPQ6WCQ1 1025 aa12.17□□□□□ -0.46
POLR1A-208ENST00000486964 NOB1Q9ULX3 412 aaKnown RBP12.17□□□□□ -0.46
POLR1A-208ENST00000486964 TNNQ9UQP3 1299 aa12.17□□□□□ -0.46
POLR1A-208ENST00000486964 LRP6O75581 1613 aa12.17□□□□□ -0.46
POLR1A-208ENST00000486964 ELL2O00472 640 aaPredicted RBP12.16□□□□□ -0.46
POLR1A-208ENST00000486964 IPO8O15397 1037 aaKnown RBP12.16□□□□□ -0.46
POLR1A-208ENST00000486964 NKX1-1Q15270 411 aaPredicted RBP12.16□□□□□ -0.46
POLR1A-208ENST00000486964 ATF7IPQ6VMQ6 1270 aa12.16□□□□□ -0.46
POLR1A-208ENST00000486964 TOM1L2Q6ZVM7 507 aa12.16□□□□□ -0.46
POLR1A-208ENST00000486964 IFNL2Q8IZJ0 200 aa12.16□□□□□ -0.46
POLR1A-208ENST00000486964 PANK1Q8TE04 598 aa12.16□□□□□ -0.46
POLR1A-208ENST00000486964 HEG1Q9ULI3 1381 aa12.15□□□□□ -0.46
POLR1A-208ENST00000486964 TRIM27P14373 513 aa12.15□□□□□ -0.46
POLR1A-208ENST00000486964 EVA1CP58658 441 aa12.15□□□□□ -0.46
POLR1A-208ENST00000486964 EIF4A1P60842 406 aaKnown RBP12.15□□□□□ -0.46
POLR1A-208ENST00000486964 MAPK8IP2Q13387 824 aaPredicted RBP12.15□□□□□ -0.46
POLR1A-208ENST00000486964 FRAT1Q92837 279 aaPredicted RBP12.15□□□□□ -0.46
POLR1A-208ENST00000486964 BTG4Q9NY30 223 aa12.15□□□□□ -0.46
POLR1A-208ENST00000486964 KIF16BQ96L93 1317 aa12.15□□□□□ -0.46
POLR1A-208ENST00000486964 CANXP27824 592 aaKnown RBP12.14□□□□□ -0.47
POLR1A-208ENST00000486964 DZIP1LQ8IYY4 767 aaKnown RBP12.14□□□□□ -0.47
POLR1A-208ENST00000486964 UPF1Q92900 1129 aaKnown RBP eCLIP12.14□□□□□ -0.47
POLR1A-208ENST00000486964 KDM6AO15550 1401 aaPredicted RBP12.14□□□□□ -0.47
POLR1A-208ENST00000486964 HOXB7P09629 217 aa12.13□□□□□ -0.47
POLR1A-208ENST00000486964 IL2RBP14784 551 aa12.13□□□□□ -0.47
POLR1A-208ENST00000486964 C8orf34Q49A92 452 aa12.13□□□□□ -0.47
POLR1A-208ENST00000486964 ZCRB1Q8TBF4 217 aaKnown RBP12.13□□□□□ -0.47
POLR1A-208ENST00000486964 DCAF5Q96JK2 942 aa12.13□□□□□ -0.47
POLR1A-208ENST00000486964 COG6Q9Y2V7 657 aa12.13□□□□□ -0.47
POLR1A-208ENST00000486964 SPATA31A6Q5VVP1 1343 aa12.13□□□□□ -0.47
POLR1A-208ENST00000486964 COL14A1Q05707 1796 aaKnown RBP12.13□□□□□ -0.47
POLR1A-208ENST00000486964 KCNQ3O43525 872 aa12.12□□□□□ -0.47
POLR1A-208ENST00000486964 HSP90AB1P08238 724 aaKnown RBP12.12□□□□□ -0.47
POLR1A-208ENST00000486964 TEFQ10587 303 aa12.12□□□□□ -0.47
POLR1A-208ENST00000486964 STRN4Q9NRL3 753 aa12.12□□□□□ -0.47
POLR1A-208ENST00000486964 DISP2A7MBM2 1401 aa12.12□□□□□ -0.47
POLR1A-208ENST00000486964 PKD1L3Q7Z443 1732 aa12.12□□□□□ -0.47
POLR1A-208ENST00000486964 BTBD11A6QL63 1104 aa12.11□□□□□ -0.47
POLR1A-208ENST00000486964 MVPQ14764 893 aaKnown RBP12.11□□□□□ -0.47
POLR1A-208ENST00000486964 CLUAP1Q96AJ1 413 aa12.11□□□□□ -0.47
POLR1A-208ENST00000486964 SLC52A2Q9HAB3 445 aa12.11□□□□□ -0.47
POLR1A-208ENST00000486964 ZNF772Q68DY9 489 aaPredicted RBP12.11□□□□□ -0.47
POLR1A-208ENST00000486964 ABCC4O15439 1325 aa12.11□□□□□ -0.47
POLR1A-208ENST00000486964 SLIT2O94813 1529 aa12.1□□□□□ -0.47
POLR1A-208ENST00000486964 ERVV-2B6SEH9 535 aa12.1□□□□□ -0.47
POLR1A-208ENST00000486964 API5Q9BZZ5 524 aaKnown RBP12.1□□□□□ -0.47
POLR1A-208ENST00000486964 PCDH11XQ9BZA7 1347 aa12.1□□□□□ -0.47
POLR1A-208ENST00000486964 PCDH11YQ9BZA8 1340 aa12.1□□□□□ -0.47
POLR1A-208ENST00000486964 MRC1P22897 1456 aa12.1□□□□□ -0.47
POLR1A-208ENST00000486964 RGS12O14924 1447 aa12.09□□□□□ -0.47
POLR1A-208ENST00000486964 PTPRCP08575 1304 aa12.09□□□□□ -0.47
POLR1A-208ENST00000486964 GIGYF1O75420 1035 aaPredicted RBP12.09□□□□□ -0.47
POLR1A-208ENST00000486964 SLC4A2P04920 1241 aa12.09□□□□□ -0.47
POLR1A-208ENST00000486964 BECN1Q14457 450 aa12.09□□□□□ -0.47
POLR1A-208ENST00000486964 CCDC30Q5VVM6 783 aa12.09□□□□□ -0.47
POLR1A-208ENST00000486964 TMEM57Q8N5G2 664 aa12.09□□□□□ -0.47
POLR1A-208ENST00000486964 NFATC2IPQ8NCF5 419 aa12.09□□□□□ -0.47
POLR1A-208ENST00000486964 UPF2Q9HAU5 1272 aaKnown RBP12.09□□□□□ -0.47
POLR1A-208ENST00000486964 THRAP3Q9Y2W1 955 aaKnown RBP12.09□□□□□ -0.47
POLR1A-208ENST00000486964 SPATA31A1Q5TZJ5 1347 aa12.08□□□□□ -0.48
POLR1A-208ENST00000486964 ZBTB7BO15156 539 aaPredicted RBP12.08□□□□□ -0.48
POLR1A-208ENST00000486964 ADAMTS2O95450 1211 aa12.08□□□□□ -0.48
POLR1A-208ENST00000486964 INTS3Q68E01 1043 aaKnown RBP12.08□□□□□ -0.48
POLR1A-208ENST00000486964 CHMP4AQ9BY43 222 aa12.08□□□□□ -0.48
POLR1A-208ENST00000486964 ZBTB40Q9NUA8 1239 aa12.08□□□□□ -0.48
POLR1A-208ENST00000486964 RNF216Q9NWF9 866 aaPredicted RBP12.08□□□□□ -0.48
POLR1A-208ENST00000486964 DDX19BQ9UMR2 479 aa12.08□□□□□ -0.48
POLR1A-208ENST00000486964 VIRMAQ69YN4 1812 aaKnown RBP12.08□□□□□ -0.48
POLR1A-208ENST00000486964 MEX3CQ5U5Q3 659 aaKnown RBP12.07□□□□□ -0.48
POLR1A-208ENST00000486964 ZNF790Q6PG37 636 aa12.07□□□□□ -0.48
POLR1A-208ENST00000486964 G2E3Q7L622 706 aa12.07□□□□□ -0.48
POLR1A-208ENST00000486964 FTSJ3Q8IY81 847 aaKnown RBP12.07□□□□□ -0.48
POLR1A-208ENST00000486964 FNBP4Q8N3X1 1017 aaPredicted RBP12.07□□□□□ -0.48
POLR1A-208ENST00000486964 CDCA7Q9BWT1 371 aaPredicted RBP12.07□□□□□ -0.48
POLR1A-208ENST00000486964 PCDHB15Q9Y5E8 787 aa12.07□□□□□ -0.48
POLR1A-208ENST00000486964 KDM3BQ7LBC6 1761 aa12.07□□□□□ -0.48
POLR1A-208ENST00000486964 SIPA1L3O60292 1781 aaPredicted RBP12.06□□□□□ -0.48
POLR1A-208ENST00000486964 SPATA31A5Q5VU36 1347 aa12.06□□□□□ -0.48
POLR1A-208ENST00000486964 SPATA31A7Q8IWB4 1347 aa12.06□□□□□ -0.48
POLR1A-208ENST00000486964 RGS3P49796 1198 aa12.06□□□□□ -0.48
POLR1A-208ENST00000486964 EP400Q96L91 3159 aa12.06□□□□□ -0.48
POLR1A-208ENST00000486964 PARP4Q9UKK3 1724 aaKnown RBP12.06□□□□□ -0.48
POLR1A-208ENST00000486964 NUTM2BA6NNL0 878 aaPredicted RBP12.05□□□□□ -0.48
POLR1A-208ENST00000486964 NUTM2EB1AL46 878 aaPredicted RBP12.05□□□□□ -0.48
POLR1A-208ENST00000486964 IGHDP01880 384 aa12.05□□□□□ -0.48
POLR1A-208ENST00000486964 GSE1Q14687 1217 aa12.05□□□□□ -0.48
POLR1A-208ENST00000486964 NFKBIBQ15653 356 aa12.05□□□□□ -0.48
POLR1A-208ENST00000486964 BARGINQ6ZT62 677 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms