RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 MPRIPQ6WCQ1 1025 aa14.73□□□□□ -0.05
PRKCB-207ENST00000486868 COL22A1Q8NFW1 1626 aaPredicted RBP14.72□□□□□ -0.05
PRKCB-207ENST00000486868 RGS12O14924 1447 aa14.72□□□□□ -0.05
PRKCB-207ENST00000486868 CCT4P50991 539 aaKnown RBP14.71□□□□□ -0.05
PRKCB-207ENST00000486868 NKX1-1Q15270 411 aaPredicted RBP14.71□□□□□ -0.05
PRKCB-207ENST00000486868 TOM1L2Q6ZVM7 507 aa14.71□□□□□ -0.05
PRKCB-207ENST00000486868 SLC52A2Q9HAB3 445 aa14.71□□□□□ -0.05
PRKCB-207ENST00000486868 ABCA3Q99758 1704 aa14.71□□□□□ -0.05
PRKCB-207ENST00000486868 RGPD5Q99666 1765 aa14.7□□□□□ -0.06
PRKCB-207ENST00000486868 MRC1P22897 1456 aa14.7□□□□□ -0.06
PRKCB-207ENST00000486868 RBM19Q9Y4C8 960 aaKnown RBP14.7□□□□□ -0.06
PRKCB-207ENST00000486868 ROBO1Q9Y6N7 1651 aa14.7□□□□□ -0.06
PRKCB-207ENST00000486868 PKD1L3Q7Z443 1732 aa14.69□□□□□ -0.06
PRKCB-207ENST00000486868 PCDH11XQ9BZA7 1347 aa14.69□□□□□ -0.06
PRKCB-207ENST00000486868 PCDH11YQ9BZA8 1340 aa14.69□□□□□ -0.06
PRKCB-207ENST00000486868 IL2RBP14784 551 aa14.69□□□□□ -0.06
PRKCB-207ENST00000486868 EVA1CP58658 441 aa14.69□□□□□ -0.06
PRKCB-207ENST00000486868 HDGFL1Q5TGJ6 251 aa14.69□□□□□ -0.06
PRKCB-207ENST00000486868 SMC5Q8IY18 1101 aa14.69□□□□□ -0.06
PRKCB-207ENST00000486868 ZCRB1Q8TBF4 217 aaKnown RBP14.69□□□□□ -0.06
PRKCB-207ENST00000486868 KDM3BQ7LBC6 1761 aa14.69□□□□□ -0.06
PRKCB-207ENST00000486868 KDM6AO15550 1401 aaPredicted RBP14.68□□□□□ -0.06
PRKCB-207ENST00000486868 ERVV-2B6SEH9 535 aa14.68□□□□□ -0.06
PRKCB-207ENST00000486868 CYP27B1O15528 508 aa14.68□□□□□ -0.06
PRKCB-207ENST00000486868 FLIIQ13045 1269 aa14.68□□□□□ -0.06
PRKCB-207ENST00000486868 PXDNLA1KZ92 1463 aa14.68□□□□□ -0.06
PRKCB-207ENST00000486868 GIGYF1O75420 1035 aaPredicted RBP14.67□□□□□ -0.06
PRKCB-207ENST00000486868 COL14A1Q05707 1796 aaKnown RBP14.66□□□□□ -0.06
PRKCB-207ENST00000486868 IBTKQ9P2D0 1353 aaPredicted RBP14.66□□□□□ -0.06
PRKCB-207ENST00000486868 ZNF790Q6PG37 636 aa14.66□□□□□ -0.06
PRKCB-207ENST00000486868 RPAP2Q8IXW5 612 aaPredicted RBP14.66□□□□□ -0.06
PRKCB-207ENST00000486868 GCC1Q96CN9 775 aa14.66□□□□□ -0.06
PRKCB-207ENST00000486868 CACNA1FO60840 1977 aa14.65□□□□□ -0.06
PRKCB-207ENST00000486868 LARP1Q6PKG0 1096 aaKnown RBP14.65□□□□□ -0.06
PRKCB-207ENST00000486868 G2E3Q7L622 706 aa14.65□□□□□ -0.06
PRKCB-207ENST00000486868 CDCA7Q9BWT1 371 aaPredicted RBP14.65□□□□□ -0.06
PRKCB-207ENST00000486868 DBF4Q9UBU7 674 aaPredicted RBP14.65□□□□□ -0.06
PRKCB-207ENST00000486868 PARP4Q9UKK3 1724 aaKnown RBP14.65□□□□□ -0.06
PRKCB-207ENST00000486868 KCNQ3O43525 872 aa14.64□□□□□ -0.07
PRKCB-207ENST00000486868 BACH2Q9BYV9 841 aa14.64□□□□□ -0.07
PRKCB-207ENST00000486868 SIPA1L3O60292 1781 aaPredicted RBP14.64□□□□□ -0.07
PRKCB-207ENST00000486868 PDE4AP27815 886 aa14.63□□□□□ -0.07
PRKCB-207ENST00000486868 HYPKQ9NX55 129 aa14.63□□□□□ -0.07
PRKCB-207ENST00000486868 BTG4Q9NY30 223 aa14.63□□□□□ -0.07
PRKCB-207ENST00000486868 PDZRN3Q9UPQ7 1066 aa14.63□□□□□ -0.07
PRKCB-207ENST00000486868 THRAP3Q9Y2W1 955 aaKnown RBP14.63□□□□□ -0.07
PRKCB-207ENST00000486868 COL16A1Q07092 1604 aaPredicted RBP14.63□□□□□ -0.07
PRKCB-207ENST00000486868 SCN11AQ9UI33 1791 aa14.62□□□□□ -0.07
PRKCB-207ENST00000486868 DISP2A7MBM2 1401 aa14.62□□□□□ -0.07
PRKCB-207ENST00000486868 GNAI3P08754 354 aa14.62□□□□□ -0.07
PRKCB-207ENST00000486868 CABP4P57796 275 aa14.62□□□□□ -0.07
PRKCB-207ENST00000486868 FKBP5Q13451 457 aaPredicted RBP14.62□□□□□ -0.07
PRKCB-207ENST00000486868 ANKRD44Q8N8A2 993 aa14.62□□□□□ -0.07
PRKCB-207ENST00000486868 NFATC2IPQ8NCF5 419 aa14.62□□□□□ -0.07
PRKCB-207ENST00000486868 ERBB4Q15303 1308 aa14.62□□□□□ -0.07
PRKCB-207ENST00000486868 SNRPA1P09661 255 aaKnown RBP14.61□□□□□ -0.07
PRKCB-207ENST00000486868 FAM161AQ3B820 660 aa14.61□□□□□ -0.07
PRKCB-207ENST00000486868 FMNL2Q96PY5 1086 aa14.61□□□□□ -0.07
PRKCB-207ENST00000486868 DDX21Q9NR30 783 aaKnown RBP eCLIP14.61□□□□□ -0.07
PRKCB-207ENST00000486868 STRN4Q9NRL3 753 aa14.61□□□□□ -0.07
PRKCB-207ENST00000486868 ATP10DQ9P241 1426 aa14.6□□□□□ -0.07
PRKCB-207ENST00000486868 NUCB1Q02818 461 aa14.6□□□□□ -0.07
PRKCB-207ENST00000486868 TTC5Q8N0Z6 440 aa14.6□□□□□ -0.07
PRKCB-207ENST00000486868 HMMRO75330 724 aa14.59□□□□□ -0.07
PRKCB-207ENST00000486868 EIF2S2P20042 333 aaKnown RBP14.59□□□□□ -0.07
PRKCB-207ENST00000486868 DCTPP1Q9H773 170 aa14.59□□□□□ -0.07
PRKCB-207ENST00000486868 CHPF2Q9P2E5 772 aa14.59□□□□□ -0.07
PRKCB-207ENST00000486868 HDAC5Q9UQL6 1122 aa14.59□□□□□ -0.07
PRKCB-207ENST00000486868 ALDH1L1O75891 902 aa14.58□□□□□ -0.08
PRKCB-207ENST00000486868 DDX58O95786 925 aaKnown RBP14.58□□□□□ -0.08
PRKCB-207ENST00000486868 CEP85Q6P2H3 762 aa14.58□□□□□ -0.08
PRKCB-207ENST00000486868 SIRT2Q8IXJ6 389 aa14.58□□□□□ -0.08
PRKCB-207ENST00000486868 DNAAF4Q8WXU2 420 aa14.58□□□□□ -0.08
PRKCB-207ENST00000486868 PHLPP1O60346 1717 aa14.58□□□□□ -0.08
PRKCB-207ENST00000486868 F6X3S4 739 aa14.57□□□□□ -0.08
PRKCB-207ENST00000486868 GNAI2P04899 355 aa14.57□□□□□ -0.08
PRKCB-207ENST00000486868 KSR2Q6VAB6 950 aa14.57□□□□□ -0.08
PRKCB-207ENST00000486868 ZNF496Q96IT1 587 aaPredicted RBP14.57□□□□□ -0.08
PRKCB-207ENST00000486868 MEIS3Q99687 375 aa14.57□□□□□ -0.08
PRKCB-207ENST00000486868 PHAXQ9H814 394 aaKnown RBP14.57□□□□□ -0.08
PRKCB-207ENST00000486868 UBAP1LF5GYI3 381 aa14.56□□□□□ -0.08
PRKCB-207ENST00000486868 RGS3P49796 1198 aa14.56□□□□□ -0.08
PRKCB-207ENST00000486868 PDIA6Q15084 440 aa14.56□□□□□ -0.08
PRKCB-207ENST00000486868 BEND3Q5T5X7 828 aa14.56□□□□□ -0.08
PRKCB-207ENST00000486868 SLC4A10Q6U841 1118 aa14.56□□□□□ -0.08
PRKCB-207ENST00000486868 CHD1LQ86WJ1 897 aa14.56□□□□□ -0.08
PRKCB-207ENST00000486868 NECTIN2Q92692 538 aa14.56□□□□□ -0.08
PRKCB-207ENST00000486868 SRCIN1Q9C0H9 1055 aa14.56□□□□□ -0.08
PRKCB-207ENST00000486868 JCADQ9P266 1359 aa14.56□□□□□ -0.08
PRKCB-207ENST00000486868 TNS2Q63HR2 1409 aa14.56□□□□□ -0.08
PRKCB-207ENST00000486868 SLC39A6Q13433 755 aa14.55□□□□□ -0.08
PRKCB-207ENST00000486868 BARGINQ6ZT62 677 aa14.55□□□□□ -0.08
PRKCB-207ENST00000486868 VSIG10Q8N0Z9 540 aa14.55□□□□□ -0.08
PRKCB-207ENST00000486868 SLIT2O94813 1529 aa14.55□□□□□ -0.08
PRKCB-207ENST00000486868 PLCH1Q4KWH8 1693 aa14.55□□□□□ -0.08
PRKCB-207ENST00000486868 PI4KAP2A4QPH2 592 aa14.54□□□□□ -0.08
PRKCB-207ENST00000486868 EXOC5O00471 708 aa14.54□□□□□ -0.08
PRKCB-207ENST00000486868 C8orf34Q49A92 452 aa14.54□□□□□ -0.08
PRKCB-207ENST00000486868 PI4KAP1Q8N8J0 262 aa14.54□□□□□ -0.08
PRKCB-207ENST00000486868 TEX13AQ9BXU3 409 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms