RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 TFCP2L1Q9NZI6 479 aa21.42■■□□□ 1.02
HDAC8-218ENST00000486704 CABP4P57796 275 aa21.41■■□□□ 1.02
HDAC8-218ENST00000486704 MTHFSDQ2M296 383 aaKnown RBP21.41■■□□□ 1.02
HDAC8-218ENST00000486704 NUDCQ9Y266 331 aa21.41■■□□□ 1.02
HDAC8-218ENST00000486704 UBR2Q8IWV8 1755 aa21.41■■□□□ 1.02
HDAC8-218ENST00000486704 TJP1Q07157 1748 aa21.41■■□□□ 1.02
HDAC8-218ENST00000486704 PTGER2P43116 358 aa21.4■■□□□ 1.02
HDAC8-218ENST00000486704 SLC16A10Q8TF71 515 aa21.4■■□□□ 1.02
HDAC8-218ENST00000486704 RSPH6AQ9H0K4 717 aa21.39■■□□□ 1.01
HDAC8-218ENST00000486704 DDX10Q13206 875 aaKnown RBP21.38■■□□□ 1.01
HDAC8-218ENST00000486704 SGIP1Q9BQI5 828 aa21.38■■□□□ 1.01
HDAC8-218ENST00000486704 MAP3K5Q99683 1374 aa21.37■■□□□ 1.01
HDAC8-218ENST00000486704 RALBP1Q15311 655 aa21.37■■□□□ 1.01
HDAC8-218ENST00000486704 GAS2L2Q8NHY3 880 aa21.37■■□□□ 1.01
HDAC8-218ENST00000486704 SLC52A2Q9HAB3 445 aa21.36■■□□□ 1.01
HDAC8-218ENST00000486704 PPP1R1BQ9UD71 204 aaPredicted RBP21.36■■□□□ 1.01
HDAC8-218ENST00000486704 ATF5Q9Y2D1 282 aaPredicted RBP21.36■■□□□ 1.01
HDAC8-218ENST00000486704 RNMTO43148 476 aaKnown RBP21.35■■□□□ 1.01
HDAC8-218ENST00000486704 PRKAR2BP31323 418 aa21.35■■□□□ 1.01
HDAC8-218ENST00000486704 ITPK1Q13572 414 aa21.35■■□□□ 1.01
HDAC8-218ENST00000486704 NFATC2IPQ8NCF5 419 aa21.35■■□□□ 1.01
HDAC8-218ENST00000486704 LINC00116Q8NCU8 138 aa21.35■■□□□ 1.01
HDAC8-218ENST00000486704 FLAD1Q8NFF5 587 aa21.35■■□□□ 1.01
HDAC8-218ENST00000486704 MYH14Q7Z406 1995 aaKnown RBP21.35■■□□□ 1.01
HDAC8-218ENST00000486704 DLG5Q8TDM6 1919 aa21.35■■□□□ 1.01
HDAC8-218ENST00000486704 FCHSD2O94868 740 aa21.34■■□□□ 1.01
HDAC8-218ENST00000486704 U2AF1L5P0DN76 240 aaPredicted RBP21.34■■□□□ 1.01
HDAC8-218ENST00000486704 ATP6V1AP38606 617 aa21.34■■□□□ 1.01
HDAC8-218ENST00000486704 U2AF1Q01081 240 aaKnown RBP eCLIP21.34■■□□□ 1.01
HDAC8-218ENST00000486704 AK7Q96M32 723 aa21.34■■□□□ 1.01
HDAC8-218ENST00000486704 LGR6Q9HBX8 967 aa21.34■■□□□ 1.01
HDAC8-218ENST00000486704 KCPQ6ZWJ8 1503 aa21.34■■□□□ 1.01
HDAC8-218ENST00000486704 C4AP0C0L4 1744 aa21.33■■□□□ 1.01
HDAC8-218ENST00000486704 SLC4A9Q96Q91 983 aa21.33■■□□□ 1.01
HDAC8-218ENST00000486704 COL23A1Q86Y22 540 aaPredicted RBP21.32■■□□□ 1
HDAC8-218ENST00000486704 GNAT3A8MTJ3 354 aa21.31■■□□□ 1
HDAC8-218ENST00000486704 SSFA2P28290 1259 aa21.31■■□□□ 1
HDAC8-218ENST00000486704 RBM42Q9BTD8 480 aaKnown RBP21.31■■□□□ 1
HDAC8-218ENST00000486704 CEMIPQ8WUJ3 1361 aa21.31■■□□□ 1
HDAC8-218ENST00000486704 CNTNAP4Q9C0A0 1308 aa21.3■■□□□ 1
HDAC8-218ENST00000486704 PHACTR3Q96KR7 559 aa21.3■■□□□ 1
HDAC8-218ENST00000486704 MYBBP1AQ9BQG0 1328 aaKnown RBP21.29■■□□□ 1
HDAC8-218ENST00000486704 AMIGO3Q86WK7 504 aa21.29■■□□□ 1
HDAC8-218ENST00000486704 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.27■■□□□ 1
HDAC8-218ENST00000486704 GNPATO15228 680 aa21.27■■□□□ 1
HDAC8-218ENST00000486704 PTCD1O75127 700 aaKnown RBP21.27■■□□□ 1
HDAC8-218ENST00000486704 POLD1P28340 1107 aa21.27■■□□□ 1
HDAC8-218ENST00000486704 RC3H1Q5TC82 1133 aaKnown RBP21.27■■□□□ 1
HDAC8-218ENST00000486704 IL17REQ8NFR9 667 aa21.27■■□□□ 1
HDAC8-218ENST00000486704 ARXQ96QS3 562 aa21.27■■□□□ 1
HDAC8-218ENST00000486704 MSH5O43196 834 aa21.26■□□□□ 0.99
HDAC8-218ENST00000486704 PHF14O94880 888 aa21.24■□□□□ 0.99
HDAC8-218ENST00000486704 TEFQ10587 303 aa21.24■□□□□ 0.99
HDAC8-218ENST00000486704 FHDC1Q9C0D6 1143 aaPredicted RBP21.24■□□□□ 0.99
HDAC8-218ENST00000486704 ADRA2BP18089 450 aa21.23■□□□□ 0.99
HDAC8-218ENST00000486704 HTATSF1O43719 755 aaKnown RBP21.22■□□□□ 0.99
HDAC8-218ENST00000486704 SLC39A6Q13433 755 aa21.22■□□□□ 0.99
HDAC8-218ENST00000486704 VSIG10Q8N0Z9 540 aa21.22■□□□□ 0.99
HDAC8-218ENST00000486704 PLEKHF1Q96S99 279 aa21.22■□□□□ 0.99
HDAC8-218ENST00000486704 RTCBQ9Y3I0 505 aaKnown RBP21.22■□□□□ 0.99
HDAC8-218ENST00000486704 RPS6KA4O75676 772 aa21.21■□□□□ 0.99
HDAC8-218ENST00000486704 NEFMP07197 916 aa21.21■□□□□ 0.99
HDAC8-218ENST00000486704 CRKLP46109 303 aaKnown RBP21.21■□□□□ 0.99
HDAC8-218ENST00000486704 SYT17Q9BSW7 474 aa21.21■□□□□ 0.99
HDAC8-218ENST00000486704 PNNQ9H307 717 aaKnown RBP21.21■□□□□ 0.99
HDAC8-218ENST00000486704 PRKRIP1Q9H875 184 aaPredicted RBP21.21■□□□□ 0.99
HDAC8-218ENST00000486704 KDM3BQ7LBC6 1761 aa21.2■□□□□ 0.99
HDAC8-218ENST00000486704 SMIM5Q71RC9 77 aa21.2■□□□□ 0.98
HDAC8-218ENST00000486704 MSL1Q68DK7 614 aa21.19■□□□□ 0.98
HDAC8-218ENST00000486704 TTC5Q8N0Z6 440 aa21.19■□□□□ 0.98
HDAC8-218ENST00000486704 RTF1Q92541 710 aaKnown RBP21.19■□□□□ 0.98
HDAC8-218ENST00000486704 KIF13BQ9NQT8 1826 aa21.19■□□□□ 0.98
HDAC8-218ENST00000486704 ZNF790Q6PG37 636 aa21.18■□□□□ 0.98
HDAC8-218ENST00000486704 DNAJC10Q8IXB1 793 aa21.18■□□□□ 0.98
HDAC8-218ENST00000486704 TRAPPC3LQ5T215 181 aa21.17■□□□□ 0.98
HDAC8-218ENST00000486704 HEG1Q9ULI3 1381 aa21.17■□□□□ 0.98
HDAC8-218ENST00000486704 LAMB4A4D0S4 1761 aa21.17■□□□□ 0.98
HDAC8-218ENST00000486704 MAPK8IP3Q9UPT6 1336 aa21.16■□□□□ 0.98
HDAC8-218ENST00000486704 CYP19A1P11511 503 aaPredicted RBP21.16■□□□□ 0.98
HDAC8-218ENST00000486704 INTS5Q6P9B9 1019 aaKnown RBP21.16■□□□□ 0.98
HDAC8-218ENST00000486704 CCDC87Q9NVE4 849 aa21.16■□□□□ 0.98
HDAC8-218ENST00000486704 NFE2L2Q16236 605 aa21.15■□□□□ 0.98
HDAC8-218ENST00000486704 MCM10Q7L590 875 aa21.15■□□□□ 0.98
HDAC8-218ENST00000486704 ARHGEF1Q92888 912 aaKnown RBP21.15■□□□□ 0.98
HDAC8-218ENST00000486704 ZNF316A6NFI3 1004 aaPredicted RBP21.14■□□□□ 0.97
HDAC8-218ENST00000486704 BTBD11A6QL63 1104 aa21.14■□□□□ 0.97
HDAC8-218ENST00000486704 ZNF496Q96IT1 587 aaPredicted RBP21.14■□□□□ 0.97
HDAC8-218ENST00000486704 SOS1Q07889 1333 aaPredicted RBP21.13■□□□□ 0.97
HDAC8-218ENST00000486704 SCN7AQ01118 1682 aa21.13■□□□□ 0.97
HDAC8-218ENST00000486704 FMNL2Q96PY5 1086 aa21.13■□□□□ 0.97
HDAC8-218ENST00000486704 RFC4P35249 363 aa21.12■□□□□ 0.97
HDAC8-218ENST00000486704 DCTN1Q14203 1278 aa21.12■□□□□ 0.97
HDAC8-218ENST00000486704 CHD4Q14839 1912 aa21.12■□□□□ 0.97
HDAC8-218ENST00000486704 USP42Q9H9J4 1324 aaKnown RBP21.11■□□□□ 0.97
HDAC8-218ENST00000486704 DCAF8L1A6NGE4 600 aa21.11■□□□□ 0.97
HDAC8-218ENST00000486704 NLGN1Q8N2Q7 840 aa21.11■□□□□ 0.97
HDAC8-218ENST00000486704 TEX13AQ9BXU3 409 aaPredicted RBP21.11■□□□□ 0.97
HDAC8-218ENST00000486704 KIAA1551Q9HCM1 1747 aa21.11■□□□□ 0.97
HDAC8-218ENST00000486704 COL15A1P39059 1388 aa21.1■□□□□ 0.97
HDAC8-218ENST00000486704 STARD3NLO95772 234 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms