RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 MMP16P51512 607 aa8.71□□□□□ -1.02
USP41-204ENST00000486536 TSGA10IPQ3SY00 556 aa8.71□□□□□ -1.02
USP41-204ENST00000486536 ADAM32Q8TC27 787 aa8.71□□□□□ -1.02
USP41-204ENST00000486536 CLP1Q92989 425 aaKnown RBP8.71□□□□□ -1.02
USP41-204ENST00000486536 CHIC2Q9UKJ5 165 aa8.71□□□□□ -1.02
USP41-204ENST00000486536 DNMT1P26358 1616 aaKnown RBP8.71□□□□□ -1.02
USP41-204ENST00000486536 SHANK2Q9UPX8 1470 aa8.7□□□□□ -1.02
USP41-204ENST00000486536 ARHGEF5Q12774 1597 aa8.7□□□□□ -1.02
USP41-204ENST00000486536 EML3Q32P44 896 aa8.7□□□□□ -1.02
USP41-204ENST00000486536 OGFOD1Q8N543 542 aa8.7□□□□□ -1.02
USP41-204ENST00000486536 WNT2BQ93097 391 aa8.7□□□□□ -1.02
USP41-204ENST00000486536 HS3ST6Q96QI5 342 aa8.7□□□□□ -1.02
USP41-204ENST00000486536 ARHGAP9Q9BRR9 750 aa8.7□□□□□ -1.02
USP41-204ENST00000486536 CDC42BPAQ5VT25 1732 aa8.7□□□□□ -1.02
USP41-204ENST00000486536 RAB3GAP2Q9H2M9 1393 aa8.7□□□□□ -1.02
USP41-204ENST00000486536 NAIPQ13075 1403 aa8.7□□□□□ -1.02
USP41-204ENST00000486536 CD109Q6YHK3 1445 aa8.7□□□□□ -1.02
USP41-204ENST00000486536 ADGRL2O95490 1459 aa8.7□□□□□ -1.02
USP41-204ENST00000486536 HECW2Q9P2P5 1572 aa8.69□□□□□ -1.02
USP41-204ENST00000486536 HNRNPMP52272 730 aaKnown RBP eCLIP8.69□□□□□ -1.02
USP41-204ENST00000486536 DPYDQ12882 1025 aa8.69□□□□□ -1.02
USP41-204ENST00000486536 ZBTB33Q86T24 672 aa8.69□□□□□ -1.02
USP41-204ENST00000486536 CLSPNQ9HAW4 1339 aa8.69□□□□□ -1.02
USP41-204ENST00000486536 ANKRD30AQ9BXX3 1397 aa8.69□□□□□ -1.02
USP41-204ENST00000486536 CCDC141Q6ZP82 1450 aa8.69□□□□□ -1.02
USP41-204ENST00000486536 GLI2P10070 1586 aa8.69□□□□□ -1.02
USP41-204ENST00000486536 SAMD9LQ8IVG5 1584 aa8.69□□□□□ -1.02
USP41-204ENST00000486536 TRAF7Q6Q0C0 670 aa8.68□□□□□ -1.02
USP41-204ENST00000486536 TRIM50Q86XT4 487 aa8.68□□□□□ -1.02
USP41-204ENST00000486536 DNAAF2Q9NVR5 837 aaKnown RBP8.68□□□□□ -1.02
USP41-204ENST00000486536 NCOA1Q15788 1441 aa8.68□□□□□ -1.02
USP41-204ENST00000486536 FANCAO15360 1455 aa8.68□□□□□ -1.02
USP41-204ENST00000486536 MYO5CQ9NQX4 1742 aa8.68□□□□□ -1.02
USP41-204ENST00000486536 ATP2B4P23634 1241 aa8.67□□□□□ -1.02
USP41-204ENST00000486536 COPS2P61201 443 aa8.67□□□□□ -1.02
USP41-204ENST00000486536 CLDN10P78369 228 aa8.67□□□□□ -1.02
USP41-204ENST00000486536 C9orf84Q5VXU9 1444 aa8.67□□□□□ -1.02
USP41-204ENST00000486536 ANKRD13DQ6ZTN6 518 aa8.67□□□□□ -1.02
USP41-204ENST00000486536 DZIP3Q86Y13 1208 aaKnown RBP8.67□□□□□ -1.02
USP41-204ENST00000486536 PRDM9Q9NQV7 894 aa8.67□□□□□ -1.02
USP41-204ENST00000486536 WBP1LQ9NX94 342 aa8.67□□□□□ -1.02
USP41-204ENST00000486536 MYT1LQ9UL68 1186 aa8.67□□□□□ -1.02
USP41-204ENST00000486536 NOD1Q9Y239 953 aa8.67□□□□□ -1.02
USP41-204ENST00000486536 CDC42BPBQ9Y5S2 1711 aa8.66□□□□□ -1.02
USP41-204ENST00000486536 PPRC1Q5VV67 1664 aaKnown RBP8.66□□□□□ -1.02
USP41-204ENST00000486536 ABCC1P33527 1531 aa8.66□□□□□ -1.02
USP41-204ENST00000486536 ATP1A2P50993 1020 aa8.66□□□□□ -1.02
USP41-204ENST00000486536 SWI5Q1ZZU3 235 aa8.66□□□□□ -1.02
USP41-204ENST00000486536 PTCRAQ6ISU1 281 aaPredicted RBP8.66□□□□□ -1.02
USP41-204ENST00000486536 SH3BP5LQ7L8J4 393 aa8.66□□□□□ -1.02
USP41-204ENST00000486536 LARGE2Q8N3Y3 721 aa8.66□□□□□ -1.02
USP41-204ENST00000486536 ZNF594Q96JF6 807 aaPredicted RBP8.66□□□□□ -1.02
USP41-204ENST00000486536 RRP7BPQ9NSQ0 103 aa8.66□□□□□ -1.02
USP41-204ENST00000486536 SYCP2Q9BX26 1530 aa8.65□□□□□ -1.02
USP41-204ENST00000486536 ARHGEF12Q9NZN5 1544 aa8.65□□□□□ -1.02
USP41-204ENST00000486536 NEO1Q92859 1461 aa8.65□□□□□ -1.02
USP41-204ENST00000486536 RTEL1-TNFRSF6BF6WH68 1400 aa8.65□□□□□ -1.02
USP41-204ENST00000486536 DHX57Q6P158 1386 aaKnown RBP8.65□□□□□ -1.02
USP41-204ENST00000486536 SOWAHDA6NJG2 315 aa8.65□□□□□ -1.02
USP41-204ENST00000486536 ZBTB7BO15156 539 aaPredicted RBP8.65□□□□□ -1.02
USP41-204ENST00000486536 CCDC24Q8N4L8 307 aa8.65□□□□□ -1.02
USP41-204ENST00000486536 UNC93B1Q9H1C4 597 aa8.65□□□□□ -1.02
USP41-204ENST00000486536 MAST1Q9Y2H9 1570 aa8.65□□□□□ -1.03
USP41-204ENST00000486536 SCAPERQ9BY12 1400 aa8.64□□□□□ -1.03
USP41-204ENST00000486536 RBM47A0AV96 593 aaKnown RBP8.64□□□□□ -1.03
USP41-204ENST00000486536 CCDC85AQ96PX6 553 aaPredicted RBP8.64□□□□□ -1.03
USP41-204ENST00000486536 DOLKQ9UPQ8 538 aa8.64□□□□□ -1.03
USP41-204ENST00000486536 CFAP74Q9C0B2 1584 aa8.64□□□□□ -1.03
USP41-204ENST00000486536 TRAPPC8Q9Y2L5 1435 aa8.63□□□□□ -1.03
USP41-204ENST00000486536 GIGYF1O75420 1035 aaPredicted RBP8.63□□□□□ -1.03
USP41-204ENST00000486536 DKK1O94907 266 aa8.63□□□□□ -1.03
USP41-204ENST00000486536 ERCC3P19447 782 aa8.63□□□□□ -1.03
USP41-204ENST00000486536 SERPINB4P48594 390 aa8.63□□□□□ -1.03
USP41-204ENST00000486536 FAM163AQ96GL9 167 aaPredicted RBP8.63□□□□□ -1.03
USP41-204ENST00000486536 TEX14Q8IWB6 1497 aa8.63□□□□□ -1.03
USP41-204ENST00000486536 ANKRD50Q9ULJ7 1429 aa8.63□□□□□ -1.03
USP41-204ENST00000486536 KIF15Q9NS87 1388 aa8.62□□□□□ -1.03
USP41-204ENST00000486536 SPAG9O60271 1321 aaKnown RBP8.62□□□□□ -1.03
USP41-204ENST00000486536 UNCXA6NJT0 531 aa8.62□□□□□ -1.03
USP41-204ENST00000486536 SCNN1AP37088 669 aa8.62□□□□□ -1.03
USP41-204ENST00000486536 OXLD1Q5BKU9 147 aa8.62□□□□□ -1.03
USP41-204ENST00000486536 DNAJC14Q6Y2X3 702 aaPredicted RBP8.62□□□□□ -1.03
USP41-204ENST00000486536 CARD14Q9BXL6 1004 aa8.62□□□□□ -1.03
USP41-204ENST00000486536 CROCC2H7BZ55 1655 aa8.62□□□□□ -1.03
USP41-204ENST00000486536 MAP3K4Q9Y6R4 1608 aa8.62□□□□□ -1.03
USP41-204ENST00000486536 MAGEB6P1A0A0J9YX57 407 aa8.61□□□□□ -1.03
USP41-204ENST00000486536 ZPR1O75312 459 aa8.61□□□□□ -1.03
USP41-204ENST00000486536 SEC13P55735 322 aa8.61□□□□□ -1.03
USP41-204ENST00000486536 GTF2IP78347 998 aa8.61□□□□□ -1.03
USP41-204ENST00000486536 LHX8Q68G74 356 aa8.61□□□□□ -1.03
USP41-204ENST00000486536 SIX5Q8N196 739 aa8.61□□□□□ -1.03
USP41-204ENST00000486536 AFAP1Q8N556 730 aa8.61□□□□□ -1.03
USP41-204ENST00000486536 C1orf216Q8TAB5 229 aa8.61□□□□□ -1.03
USP41-204ENST00000486536 KIAA1024Q9UPX6 916 aa8.61□□□□□ -1.03
USP41-204ENST00000486536 RBM19Q9Y4C8 960 aaKnown RBP8.61□□□□□ -1.03
USP41-204ENST00000486536 ZNF518AQ6AHZ1 1483 aa8.61□□□□□ -1.03
USP41-204ENST00000486536 COL17A1Q9UMD9 1497 aaPredicted RBP8.61□□□□□ -1.03
USP41-204ENST00000486536 GCC2Q8IWJ2 1684 aa8.61□□□□□ -1.03
USP41-204ENST00000486536 PRMT3O60678 531 aa8.6□□□□□ -1.03
USP41-204ENST00000486536 ADH1BP00325 375 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms