RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 CCT4P50991 539 aaKnown RBP25.54■■□□□ 1.68
HPS3-206ENST00000486530 MYT1Q01538 1121 aa25.54■■□□□ 1.68
HPS3-206ENST00000486530 G2E3Q7L622 706 aa25.54■■□□□ 1.68
HPS3-206ENST00000486530 ADAMTS7Q9UKP4 1686 aa25.53■■□□□ 1.68
HPS3-206ENST00000486530 CHRNA2Q15822 529 aa25.53■■□□□ 1.68
HPS3-206ENST00000486530 C1orf141Q5JVX7 400 aa25.53■■□□□ 1.68
HPS3-206ENST00000486530 LNPKQ9C0E8 428 aa25.53■■□□□ 1.68
HPS3-206ENST00000486530 LGR6Q9HBX8 967 aa25.52■■□□□ 1.68
HPS3-206ENST00000486530 SIPA1L3O60292 1781 aaPredicted RBP25.52■■□□□ 1.68
HPS3-206ENST00000486530 RPAP2Q8IXW5 612 aaPredicted RBP25.51■■□□□ 1.67
HPS3-206ENST00000486530 PXDNLA1KZ92 1463 aa25.51■■□□□ 1.67
HPS3-206ENST00000486530 NHSL1Q5SYE7 1610 aa25.51■■□□□ 1.67
HPS3-206ENST00000486530 LTBP4Q8N2S1 1624 aa25.51■■□□□ 1.67
HPS3-206ENST00000486530 SEC24BO95487 1268 aa25.51■■□□□ 1.67
HPS3-206ENST00000486530 HOXB7P09629 217 aa25.51■■□□□ 1.67
HPS3-206ENST00000486530 TEFQ10587 303 aa25.51■■□□□ 1.67
HPS3-206ENST00000486530 FLIIQ13045 1269 aa25.51■■□□□ 1.67
HPS3-206ENST00000486530 ANKRD45Q5TZF3 282 aa25.51■■□□□ 1.67
HPS3-206ENST00000486530 ANKRD44Q8N8A2 993 aa25.51■■□□□ 1.67
HPS3-206ENST00000486530 UPF2Q9HAU5 1272 aaKnown RBP25.51■■□□□ 1.67
HPS3-206ENST00000486530 CHMP4AQ9BY43 222 aa25.5■■□□□ 1.67
HPS3-206ENST00000486530 RNMTO43148 476 aaKnown RBP25.48■■□□□ 1.67
HPS3-206ENST00000486530 EIF4A1P60842 406 aaKnown RBP25.48■■□□□ 1.67
HPS3-206ENST00000486530 MEIS3Q99687 375 aa25.48■■□□□ 1.67
HPS3-206ENST00000486530 PLEKHG2Q9H7P9 1386 aa25.47■■□□□ 1.67
HPS3-206ENST00000486530 HDGFL1Q5TGJ6 251 aa25.47■■□□□ 1.67
HPS3-206ENST00000486530 CEP85Q6P2H3 762 aa25.47■■□□□ 1.67
HPS3-206ENST00000486530 DCTPP1Q9H773 170 aa25.47■■□□□ 1.67
HPS3-206ENST00000486530 NLRP2Q9NX02 1062 aa25.47■■□□□ 1.67
HPS3-206ENST00000486530 F6X3S4 739 aa25.47■■□□□ 1.67
HPS3-206ENST00000486530 FKBP5Q13451 457 aaPredicted RBP25.47■■□□□ 1.67
HPS3-206ENST00000486530 SLC4A10Q6U841 1118 aa25.47■■□□□ 1.67
HPS3-206ENST00000486530 MPRIPQ6WCQ1 1025 aa25.47■■□□□ 1.67
HPS3-206ENST00000486530 BTBD11A6QL63 1104 aa25.45■■□□□ 1.66
HPS3-206ENST00000486530 NECTIN2Q92692 538 aa25.45■■□□□ 1.66
HPS3-206ENST00000486530 DAXXQ9UER7 740 aaPredicted RBP25.45■■□□□ 1.66
HPS3-206ENST00000486530 SCN11AQ9UI33 1791 aa25.44■■□□□ 1.66
HPS3-206ENST00000486530 CSB-PGBD3P0DP91 1061 aa25.43■■□□□ 1.66
HPS3-206ENST00000486530 BMP2KLQ5H9B9 411 aa25.43■■□□□ 1.66
HPS3-206ENST00000486530 RAPGEF4Q8WZA2 1011 aa25.43■■□□□ 1.66
HPS3-206ENST00000486530 TBC1D32Q96NH3 1257 aa25.43■■□□□ 1.66
HPS3-206ENST00000486530 PRDM11Q9NQV5 511 aa25.43■■□□□ 1.66
HPS3-206ENST00000486530 PKD1L3Q7Z443 1732 aa25.41■■□□□ 1.66
HPS3-206ENST00000486530 HMMRO75330 724 aa25.4■■□□□ 1.66
HPS3-206ENST00000486530 GNAI3P08754 354 aa25.39■■□□□ 1.66
HPS3-206ENST00000486530 ABCA3Q99758 1704 aa25.39■■□□□ 1.65
HPS3-206ENST00000486530 MEGF6O75095 1541 aa25.38■■□□□ 1.65
HPS3-206ENST00000486530 GNAI2P04899 355 aa25.38■■□□□ 1.65
HPS3-206ENST00000486530 TATP17735 454 aaPredicted RBP25.38■■□□□ 1.65
HPS3-206ENST00000486530 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.38■■□□□ 1.65
HPS3-206ENST00000486530 KCNQ3O43525 872 aa25.38■■□□□ 1.65
HPS3-206ENST00000486530 ROBO1Q9Y6N7 1651 aa25.37■■□□□ 1.65
HPS3-206ENST00000486530 HEG1Q9ULI3 1381 aa25.37■■□□□ 1.65
HPS3-206ENST00000486530 EIF2S2P20042 333 aaKnown RBP25.36■■□□□ 1.65
HPS3-206ENST00000486530 SPG7Q9UQ90 795 aa25.36■■□□□ 1.65
HPS3-206ENST00000486530 TOM1O60784 492 aa25.35■■□□□ 1.65
HPS3-206ENST00000486530 PHAXQ9H814 394 aaKnown RBP25.35■■□□□ 1.65
HPS3-206ENST00000486530 WDR17Q8IZU2 1322 aa25.35■■□□□ 1.65
HPS3-206ENST00000486530 CHPF2Q9P2E5 772 aa25.34■■□□□ 1.65
HPS3-206ENST00000486530 AHDC1Q5TGY3 1603 aaPredicted RBP25.34■■□□□ 1.65
HPS3-206ENST00000486530 KDM6AO15550 1401 aaPredicted RBP25.33■■□□□ 1.65
HPS3-206ENST00000486530 COL5A2P05997 1499 aaPredicted RBP25.33■■□□□ 1.65
HPS3-206ENST00000486530 PARP4Q9UKK3 1724 aaKnown RBP25.33■■□□□ 1.64
HPS3-206ENST00000486530 MFAP1P55081 439 aaKnown RBP25.32■■□□□ 1.64
HPS3-206ENST00000486530 PIP4K2BP78356 416 aa25.32■■□□□ 1.64
HPS3-206ENST00000486530 BECN1Q14457 450 aa25.32■■□□□ 1.64
HPS3-206ENST00000486530 PHKG2P15735 406 aa25.32■■□□□ 1.64
HPS3-206ENST00000486530 MRC1P22897 1456 aa25.32■■□□□ 1.64
HPS3-206ENST00000486530 SLC4A3P48751 1232 aa25.32■■□□□ 1.64
HPS3-206ENST00000486530 PLEKHM2Q8IWE5 1019 aa25.32■■□□□ 1.64
HPS3-206ENST00000486530 DBF4Q9UBU7 674 aaPredicted RBP25.32■■□□□ 1.64
HPS3-206ENST00000486530 GIGYF1O75420 1035 aaPredicted RBP25.31■■□□□ 1.64
HPS3-206ENST00000486530 IFNL2Q8IZJ0 200 aa25.3■■□□□ 1.64
HPS3-206ENST00000486530 C22orf23Q9BZE7 217 aa25.3■■□□□ 1.64
HPS3-206ENST00000486530 UBAP1LF5GYI3 381 aa25.29■■□□□ 1.64
HPS3-206ENST00000486530 TOM1L2Q6ZVM7 507 aa25.29■■□□□ 1.64
HPS3-206ENST00000486530 SRCIN1Q9C0H9 1055 aa25.29■■□□□ 1.64
HPS3-206ENST00000486530 SLC52A2Q9HAB3 445 aa25.29■■□□□ 1.64
HPS3-206ENST00000486530 CARD10Q9BWT7 1032 aa25.28■■□□□ 1.64
HPS3-206ENST00000486530 USP44Q9H0E7 712 aa25.28■■□□□ 1.64
HPS3-206ENST00000486530 C5P01031 1676 aa25.28■■□□□ 1.64
HPS3-206ENST00000486530 UBTFL1P0CB47 393 aaPredicted RBP25.27■■□□□ 1.64
HPS3-206ENST00000486530 ATP8B2P98198 1209 aa25.27■■□□□ 1.64
HPS3-206ENST00000486530 NBR1Q14596 966 aa25.27■■□□□ 1.64
HPS3-206ENST00000486530 DNAAF4Q8WXU2 420 aa25.27■■□□□ 1.64
HPS3-206ENST00000486530 TTC22Q5TAA0 569 aa25.26■■□□□ 1.63
HPS3-206ENST00000486530 CYP27B1O15528 508 aa25.26■■□□□ 1.63
HPS3-206ENST00000486530 HSP90AB1P08238 724 aaKnown RBP25.26■■□□□ 1.63
HPS3-206ENST00000486530 LARP1Q6PKG0 1096 aaKnown RBP25.26■■□□□ 1.63
HPS3-206ENST00000486530 LRRFIP2Q9Y608 721 aaKnown RBP25.26■■□□□ 1.63
HPS3-206ENST00000486530 EVA1CP58658 441 aa25.25■■□□□ 1.63
HPS3-206ENST00000486530 DCAF5Q96JK2 942 aa25.25■■□□□ 1.63
HPS3-206ENST00000486530 ADCY9O60503 1353 aa25.25■■□□□ 1.63
HPS3-206ENST00000486530 PI4KAP2A4QPH2 592 aa25.24■■□□□ 1.63
HPS3-206ENST00000486530 EIF5BO60841 1220 aaKnown RBP25.24■■□□□ 1.63
HPS3-206ENST00000486530 GSPT1P15170 499 aaKnown RBP25.24■■□□□ 1.63
HPS3-206ENST00000486530 ZNF790Q6PG37 636 aa25.24■■□□□ 1.63
HPS3-206ENST00000486530 PI4KAP1Q8N8J0 262 aa25.24■■□□□ 1.63
HPS3-206ENST00000486530 CDC45O75419 566 aa25.23■■□□□ 1.63
HPS3-206ENST00000486530 BEND3Q5T5X7 828 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms