RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 SBF1O95248 1867 aa13.95□□□□□ -0.18
SND1-213ENST00000486037 PCDH11XQ9BZA7 1347 aa13.95□□□□□ -0.18
SND1-213ENST00000486037 PCDH11YQ9BZA8 1340 aa13.95□□□□□ -0.18
SND1-213ENST00000486037 HDGFL2Q7Z4V5 671 aaPredicted RBP13.95□□□□□ -0.18
SND1-213ENST00000486037 SMARCC1Q92922 1105 aaPredicted RBP13.95□□□□□ -0.18
SND1-213ENST00000486037 DCAF5Q96JK2 942 aa13.95□□□□□ -0.18
SND1-213ENST00000486037 TATP17735 454 aaPredicted RBP13.94□□□□□ -0.18
SND1-213ENST00000486037 RRS1Q15050 365 aaKnown RBP13.94□□□□□ -0.18
SND1-213ENST00000486037 CCER1Q8TC90 406 aaPredicted RBP13.94□□□□□ -0.18
SND1-213ENST00000486037 RAPGEF4Q8WZA2 1011 aa13.94□□□□□ -0.18
SND1-213ENST00000486037 L3MBTL2Q969R5 705 aa13.94□□□□□ -0.18
SND1-213ENST00000486037 ROCK2O75116 1388 aaKnown RBP13.94□□□□□ -0.18
SND1-213ENST00000486037 CGNL1Q0VF96 1302 aa13.93□□□□□ -0.18
SND1-213ENST00000486037 FOXN1O15353 648 aa13.93□□□□□ -0.18
SND1-213ENST00000486037 FAM161AQ3B820 660 aa13.93□□□□□ -0.18
SND1-213ENST00000486037 ASAP1Q9ULH1 1129 aa13.93□□□□□ -0.18
SND1-213ENST00000486037 RASSF7Q02833 373 aa13.92□□□□□ -0.18
SND1-213ENST00000486037 CCDC87Q9NVE4 849 aa13.92□□□□□ -0.18
SND1-213ENST00000486037 GYS1P13807 737 aa13.91□□□□□ -0.18
SND1-213ENST00000486037 HMGB2P26583 209 aaKnown RBP13.91□□□□□ -0.18
SND1-213ENST00000486037 ATP6V1AP38606 617 aa13.91□□□□□ -0.18
SND1-213ENST00000486037 TMF1P82094 1093 aa13.91□□□□□ -0.18
SND1-213ENST00000486037 CHRNA5P30532 468 aa13.9□□□□□ -0.18
SND1-213ENST00000486037 ARHGEF1Q92888 912 aaKnown RBP13.9□□□□□ -0.18
SND1-213ENST00000486037 COG3Q96JB2 828 aa13.9□□□□□ -0.18
SND1-213ENST00000486037 SLC4A9Q96Q91 983 aa13.9□□□□□ -0.18
SND1-213ENST00000486037 PIM2Q9P1W9 311 aa13.9□□□□□ -0.18
SND1-213ENST00000486037 MKRN1Q9UHC7 482 aaKnown RBP13.9□□□□□ -0.18
SND1-213ENST00000486037 RTL1A6NKG5 1358 aa13.9□□□□□ -0.18
SND1-213ENST00000486037 POTECB2RU33 542 aa13.89□□□□□ -0.19
SND1-213ENST00000486037 DALRD3Q5D0E6 543 aaKnown RBP13.89□□□□□ -0.19
SND1-213ENST00000486037 NLGN1Q8N2Q7 840 aa13.89□□□□□ -0.19
SND1-213ENST00000486037 KDRP35968 1356 aa13.88□□□□□ -0.19
SND1-213ENST00000486037 NKX1-1Q15270 411 aaPredicted RBP13.88□□□□□ -0.19
SND1-213ENST00000486037 HSP90AB2PQ58FF8 381 aa13.88□□□□□ -0.19
SND1-213ENST00000486037 TRAPPC3LQ5T215 181 aa13.88□□□□□ -0.19
SND1-213ENST00000486037 TERF2IPQ9NYB0 399 aa13.88□□□□□ -0.19
SND1-213ENST00000486037 PCDH10Q9P2E7 1040 aa13.88□□□□□ -0.19
SND1-213ENST00000486037 KDM6AO15550 1401 aaPredicted RBP13.88□□□□□ -0.19
SND1-213ENST00000486037 DDR1Q08345 913 aa13.87□□□□□ -0.19
SND1-213ENST00000486037 ATG3Q9NT62 314 aa13.87□□□□□ -0.19
SND1-213ENST00000486037 PARP3Q9Y6F1 533 aa13.87□□□□□ -0.19
SND1-213ENST00000486037 GLTPD2A6NH11 291 aa13.86□□□□□ -0.19
SND1-213ENST00000486037 VEGFAP15692 232 aaPredicted RBP13.86□□□□□ -0.19
SND1-213ENST00000486037 PRDM10Q9NQV6 1147 aa13.86□□□□□ -0.19
SND1-213ENST00000486037 RTCBQ9Y3I0 505 aaKnown RBP13.86□□□□□ -0.19
SND1-213ENST00000486037 SMG6Q86US8 1419 aaKnown RBP13.85□□□□□ -0.19
SND1-213ENST00000486037 TMOD3Q9NYL9 352 aa13.85□□□□□ -0.19
SND1-213ENST00000486037 SRP68Q9UHB9 627 aaKnown RBP13.85□□□□□ -0.19
SND1-213ENST00000486037 MYH14Q7Z406 1995 aaKnown RBP13.85□□□□□ -0.19
SND1-213ENST00000486037 COL5A3P25940 1745 aaPredicted RBP13.84□□□□□ -0.19
SND1-213ENST00000486037 TIAM2Q8IVF5 1701 aa13.84□□□□□ -0.19
SND1-213ENST00000486037 POTEIP0CG38 1075 aa13.84□□□□□ -0.19
SND1-213ENST00000486037 POTEJP0CG39 1038 aa13.84□□□□□ -0.19
SND1-213ENST00000486037 INSRP06213 1382 aa13.83□□□□□ -0.19
SND1-213ENST00000486037 FKBP8Q14318 412 aa13.83□□□□□ -0.2
SND1-213ENST00000486037 ABHD8Q96I13 439 aa13.83□□□□□ -0.2
SND1-213ENST00000486037 GGNBP2Q9H3C7 697 aa13.83□□□□□ -0.2
SND1-213ENST00000486037 CREBZFQ9NS37 354 aa13.83□□□□□ -0.2
SND1-213ENST00000486037 NCAPD2Q15021 1401 aa13.82□□□□□ -0.2
SND1-213ENST00000486037 RFC4P35249 363 aa13.82□□□□□ -0.2
SND1-213ENST00000486037 SIN3AQ96ST3 1273 aa13.82□□□□□ -0.2
SND1-213ENST00000486037 ZC3H4Q9UPT8 1303 aaKnown RBP13.82□□□□□ -0.2
SND1-213ENST00000486037 CNTNAP1P78357 1384 aa13.82□□□□□ -0.2
SND1-213ENST00000486037 CCDC88AQ3V6T2 1871 aa13.81□□□□□ -0.2
SND1-213ENST00000486037 RPS6KA4O75676 772 aa13.81□□□□□ -0.2
SND1-213ENST00000486037 LMNB1P20700 586 aa13.81□□□□□ -0.2
SND1-213ENST00000486037 LBX1P52954 281 aa13.81□□□□□ -0.2
SND1-213ENST00000486037 FYB1O15117 783 aa13.8□□□□□ -0.2
SND1-213ENST00000486037 ZEB1P37275 1124 aaPredicted RBP13.8□□□□□ -0.2
SND1-213ENST00000486037 CTCFP49711 727 aaPredicted RBP13.8□□□□□ -0.2
SND1-213ENST00000486037 RC3H1Q5TC82 1133 aaKnown RBP13.8□□□□□ -0.2
SND1-213ENST00000486037 RBM42Q9BTD8 480 aaKnown RBP13.8□□□□□ -0.2
SND1-213ENST00000486037 CNTNAP4Q9C0A0 1308 aa13.8□□□□□ -0.2
SND1-213ENST00000486037 CLSPNQ9HAW4 1339 aa13.8□□□□□ -0.2
SND1-213ENST00000486037 FLT4P35916 1363 aa13.8□□□□□ -0.2
SND1-213ENST00000486037 NFKBIEO00221 500 aa13.79□□□□□ -0.2
SND1-213ENST00000486037 POLRMTO00411 1230 aaKnown RBP13.79□□□□□ -0.2
SND1-213ENST00000486037 PHKG2P15735 406 aa13.79□□□□□ -0.2
SND1-213ENST00000486037 VEGFBP49765 207 aa13.79□□□□□ -0.2
SND1-213ENST00000486037 ZNF831Q5JPB2 1677 aa13.79□□□□□ -0.2
SND1-213ENST00000486037 WBP1LQ9NX94 342 aa13.78□□□□□ -0.2
SND1-213ENST00000486037 SPG7Q9UQ90 795 aa13.78□□□□□ -0.2
SND1-213ENST00000486037 EMILIN1Q9Y6C2 1016 aa13.78□□□□□ -0.2
SND1-213ENST00000486037 USP42Q9H9J4 1324 aaKnown RBP13.78□□□□□ -0.2
SND1-213ENST00000486037 TNRC18O15417 2968 aaPredicted RBP13.78□□□□□ -0.2
SND1-213ENST00000486037 ADAMTS7Q9UKP4 1686 aa13.78□□□□□ -0.2
SND1-213ENST00000486037 VIRMAQ69YN4 1812 aaKnown RBP13.78□□□□□ -0.2
SND1-213ENST00000486037 HSPA8P11142 646 aaKnown RBP13.77□□□□□ -0.21
SND1-213ENST00000486037 CHADLQ6NUI6 762 aa13.77□□□□□ -0.21
SND1-213ENST00000486037 CARD11Q9BXL7 1154 aa13.77□□□□□ -0.21
SND1-213ENST00000486037 TM4SF1P30408 202 aa13.76□□□□□ -0.21
SND1-213ENST00000486037 PUS7Q96PZ0 661 aaKnown RBP13.76□□□□□ -0.21
SND1-213ENST00000486037 PASKQ96RG2 1323 aa13.75□□□□□ -0.21
SND1-213ENST00000486037 MLLT1Q03111 559 aaPredicted RBP13.75□□□□□ -0.21
SND1-213ENST00000486037 IFNL2Q8IZJ0 200 aa13.75□□□□□ -0.21
SND1-213ENST00000486037 AIDAQ96BJ3 306 aa13.75□□□□□ -0.21
SND1-213ENST00000486037 EYA1Q99502 592 aa13.75□□□□□ -0.21
SND1-213ENST00000486037 AFDNP55196 1824 aaKnown RBP13.75□□□□□ -0.21
SND1-213ENST00000486037 DLEC1Q9Y238 1755 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms