RNA–Protein interactions for RNA: ENST00000485589.1

NPDC1-204, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 506 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-204ENST00000485589 KIF13BQ9NQT8 1826 aa24.16■■□□□ 1.46
NPDC1-204ENST00000485589 AMER1Q5JTC6 1135 aaPredicted RBP24.15■■□□□ 1.46
NPDC1-204ENST00000485589 SLC4A9Q96Q91 983 aa24.15■■□□□ 1.46
NPDC1-204ENST00000485589 MORC1Q86VD1 984 aa24.14■■□□□ 1.45
NPDC1-204ENST00000485589 CICQ96RK0 1608 aaPredicted RBP24.13■■□□□ 1.45
NPDC1-204ENST00000485589 PHF14O94880 888 aa24.13■■□□□ 1.45
NPDC1-204ENST00000485589 AK7Q96M32 723 aa24.13■■□□□ 1.45
NPDC1-204ENST00000485589 N4BP2Q86UW6 1770 aaPredicted RBP24.12■■□□□ 1.45
NPDC1-204ENST00000485589 YBX3P16989 372 aaKnown RBP eCLIP24.12■■□□□ 1.45
NPDC1-204ENST00000485589 GPR162Q16538 588 aa24.12■■□□□ 1.45
NPDC1-204ENST00000485589 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.11■■□□□ 1.45
NPDC1-204ENST00000485589 IL13P35225 146 aa24.1■■□□□ 1.45
NPDC1-204ENST00000485589 ADAMTS7Q9UKP4 1686 aa24.1■■□□□ 1.45
NPDC1-204ENST00000485589 ATP6V1AP38606 617 aa24.09■■□□□ 1.45
NPDC1-204ENST00000485589 PELP1Q8IZL8 1130 aaKnown RBP24.09■■□□□ 1.45
NPDC1-204ENST00000485589 FLAD1Q8NFF5 587 aa24.09■■□□□ 1.45
NPDC1-204ENST00000485589 KNSTRNQ9Y448 316 aa24.09■■□□□ 1.45
NPDC1-204ENST00000485589 ZNF530Q6P9A1 599 aaPredicted RBP24.08■■□□□ 1.45
NPDC1-204ENST00000485589 BRCA1P38398 1863 aaKnown RBP24.08■■□□□ 1.45
NPDC1-204ENST00000485589 PER1O15534 1290 aaPredicted RBP24.07■■□□□ 1.44
NPDC1-204ENST00000485589 SSFA2P28290 1259 aa24.07■■□□□ 1.44
NPDC1-204ENST00000485589 ERVV-2B6SEH9 535 aa24.06■■□□□ 1.44
NPDC1-204ENST00000485589 GNPATO15228 680 aa24.06■■□□□ 1.44
NPDC1-204ENST00000485589 PLEKHO1Q53GL0 409 aaPredicted RBP24.06■■□□□ 1.44
NPDC1-204ENST00000485589 SULT6B1Q6IMI4 303 aa24.06■■□□□ 1.44
NPDC1-204ENST00000485589 DCAF5Q96JK2 942 aa24.06■■□□□ 1.44
NPDC1-204ENST00000485589 COL3A1P02461 1466 aaPredicted RBP24.03■■□□□ 1.44
NPDC1-204ENST00000485589 UBR2Q8IWV8 1755 aa24.03■■□□□ 1.44
NPDC1-204ENST00000485589 SIPA1L3O60292 1781 aaPredicted RBP24.02■■□□□ 1.44
NPDC1-204ENST00000485589 AMOTQ4VCS5 1084 aa24.02■■□□□ 1.44
NPDC1-204ENST00000485589 CD2APQ9Y5K6 639 aa24.02■■□□□ 1.44
NPDC1-204ENST00000485589 MRC1P22897 1456 aa24.01■■□□□ 1.43
NPDC1-204ENST00000485589 MTHFSP49914 203 aa24.01■■□□□ 1.43
NPDC1-204ENST00000485589 RBM42Q9BTD8 480 aaKnown RBP24.01■■□□□ 1.43
NPDC1-204ENST00000485589 HSP90AB1P08238 724 aaKnown RBP24■■□□□ 1.43
NPDC1-204ENST00000485589 HMGB2P26583 209 aaKnown RBP23.99■■□□□ 1.43
NPDC1-204ENST00000485589 CABP4P57796 275 aa23.98■■□□□ 1.43
NPDC1-204ENST00000485589 CC2D1BQ5T0F9 858 aaKnown RBP23.98■■□□□ 1.43
NPDC1-204ENST00000485589 NFATC2IPQ8NCF5 419 aa23.98■■□□□ 1.43
NPDC1-204ENST00000485589 WWC3Q9ULE0 1092 aa23.98■■□□□ 1.43
NPDC1-204ENST00000485589 HMOX1P09601 288 aa23.97■■□□□ 1.43
NPDC1-204ENST00000485589 CNTNAP4Q9C0A0 1308 aa23.97■■□□□ 1.43
NPDC1-204ENST00000485589 AFDNP55196 1824 aaKnown RBP23.96■■□□□ 1.43
NPDC1-204ENST00000485589 KCPQ6ZWJ8 1503 aa23.96■■□□□ 1.43
NPDC1-204ENST00000485589 C1orf141Q5JVX7 400 aa23.96■■□□□ 1.43
NPDC1-204ENST00000485589 PTCD1O75127 700 aaKnown RBP23.95■■□□□ 1.42
NPDC1-204ENST00000485589 LGR6Q9HBX8 967 aa23.95■■□□□ 1.42
NPDC1-204ENST00000485589 PXDNLA1KZ92 1463 aa23.94■■□□□ 1.42
NPDC1-204ENST00000485589 RC3H1Q5TC82 1133 aaKnown RBP23.94■■□□□ 1.42
NPDC1-204ENST00000485589 ARHGEF1Q92888 912 aaKnown RBP23.94■■□□□ 1.42
NPDC1-204ENST00000485589 ARFGEF1Q9Y6D6 1849 aa23.94■■□□□ 1.42
NPDC1-204ENST00000485589 MMP10P09238 476 aa23.93■■□□□ 1.42
NPDC1-204ENST00000485589 RTCBQ9Y3I0 505 aaKnown RBP23.93■■□□□ 1.42
NPDC1-204ENST00000485589 GRIN3BO60391 1043 aa23.92■■□□□ 1.42
NPDC1-204ENST00000485589 C10orf71Q711Q0 1435 aa23.92■■□□□ 1.42
NPDC1-204ENST00000485589 RPS6KA4O75676 772 aa23.91■■□□□ 1.42
NPDC1-204ENST00000485589 GYS1P13807 737 aa23.91■■□□□ 1.42
NPDC1-204ENST00000485589 AKAP4Q5JQC9 854 aa23.91■■□□□ 1.42
NPDC1-204ENST00000485589 TRAPPC3LQ5T215 181 aa23.91■■□□□ 1.42
NPDC1-204ENST00000485589 NPC1L1Q9UHC9 1359 aa23.91■■□□□ 1.42
NPDC1-204ENST00000485589 CNGB1Q14028 1251 aaPredicted RBP23.9■■□□□ 1.42
NPDC1-204ENST00000485589 MTHFSDQ2M296 383 aaKnown RBP23.9■■□□□ 1.42
NPDC1-204ENST00000485589 ADCY9O60503 1353 aa23.9■■□□□ 1.42
NPDC1-204ENST00000485589 CRKLP46109 303 aaKnown RBP23.89■■□□□ 1.41
NPDC1-204ENST00000485589 ATP10DQ9P241 1426 aa23.88■■□□□ 1.41
NPDC1-204ENST00000485589 RNMTO43148 476 aaKnown RBP23.88■■□□□ 1.41
NPDC1-204ENST00000485589 DIAPH1O60610 1272 aaKnown RBP23.88■■□□□ 1.41
NPDC1-204ENST00000485589 SLC52A2Q9HAB3 445 aa23.88■■□□□ 1.41
NPDC1-204ENST00000485589 ADRA2BP18089 450 aa23.87■■□□□ 1.41
NPDC1-204ENST00000485589 SLC39A6Q13433 755 aa23.87■■□□□ 1.41
NPDC1-204ENST00000485589 SRP68Q9UHB9 627 aaKnown RBP23.87■■□□□ 1.41
NPDC1-204ENST00000485589 NRXN2Q9P2S2 1712 aa23.87■■□□□ 1.41
NPDC1-204ENST00000485589 C1QTNF8P60827 252 aa23.86■■□□□ 1.41
NPDC1-204ENST00000485589 INTS5Q6P9B9 1019 aaKnown RBP23.86■■□□□ 1.41
NPDC1-204ENST00000485589 DNAJC10Q8IXB1 793 aa23.85■■□□□ 1.41
NPDC1-204ENST00000485589 SBF1O95248 1867 aa23.84■■□□□ 1.41
NPDC1-204ENST00000485589 DLEC1Q9Y238 1755 aa23.84■■□□□ 1.41
NPDC1-204ENST00000485589 NLGN1Q8N2Q7 840 aa23.84■■□□□ 1.41
NPDC1-204ENST00000485589 DLG5Q8TDM6 1919 aa23.83■■□□□ 1.41
NPDC1-204ENST00000485589 RFC4P35249 363 aa23.83■■□□□ 1.41
NPDC1-204ENST00000485589 USP42Q9H9J4 1324 aaKnown RBP23.83■■□□□ 1.4
NPDC1-204ENST00000485589 FKBP8Q14318 412 aa23.82■■□□□ 1.4
NPDC1-204ENST00000485589 A0A0G2JLW4 131 aa23.81■■□□□ 1.4
NPDC1-204ENST00000485589 DDR1Q08345 913 aa23.81■■□□□ 1.4
NPDC1-204ENST00000485589 GIGYF1O75420 1035 aaPredicted RBP23.8■■□□□ 1.4
NPDC1-204ENST00000485589 ANKRD31Q8N7Z5 1873 aa23.8■■□□□ 1.4
NPDC1-204ENST00000485589 SCN7AQ01118 1682 aa23.79■■□□□ 1.4
NPDC1-204ENST00000485589 CYP19A1P11511 503 aaPredicted RBP23.79■■□□□ 1.4
NPDC1-204ENST00000485589 SOS1Q07889 1333 aaPredicted RBP23.79■■□□□ 1.4
NPDC1-204ENST00000485589 CCDC88AQ3V6T2 1871 aa23.79■■□□□ 1.4
NPDC1-204ENST00000485589 DPEP1P16444 411 aa23.78■■□□□ 1.4
NPDC1-204ENST00000485589 CCDC87Q9NVE4 849 aa23.78■■□□□ 1.4
NPDC1-204ENST00000485589 U2SURPO15042 1029 aaKnown RBP23.77■■□□□ 1.4
NPDC1-204ENST00000485589 KCNA3P22001 575 aa23.77■■□□□ 1.4
NPDC1-204ENST00000485589 IL17REQ8NFR9 667 aa23.77■■□□□ 1.4
NPDC1-204ENST00000485589 ZBTB1Q9Y2K1 713 aa23.77■■□□□ 1.4
NPDC1-204ENST00000485589 BCORQ6W2J9 1755 aa23.76■■□□□ 1.39
NPDC1-204ENST00000485589 TGFB2P61812 414 aa23.76■■□□□ 1.39
NPDC1-204ENST00000485589 PARP3Q9Y6F1 533 aa23.76■■□□□ 1.39
NPDC1-204ENST00000485589 CEP350Q5VT06 3117 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms