RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 GTF3C2Q8WUA4 911 aaPredicted RBP6.95□□□□□ -1.3
FN1-222ENST00000485567 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.95□□□□□ -1.3
FN1-222ENST00000485567 LGR5O75473 907 aa6.94□□□□□ -1.3
FN1-222ENST00000485567 ABL1P00519 1130 aa6.94□□□□□ -1.3
FN1-222ENST00000485567 FOXK2Q01167 660 aa6.94□□□□□ -1.3
FN1-222ENST00000485567 MTFR1Q15390 333 aa6.94□□□□□ -1.3
FN1-222ENST00000485567 DNAJC14Q6Y2X3 702 aaPredicted RBP6.94□□□□□ -1.3
FN1-222ENST00000485567 SCG3Q8WXD2 468 aaKnown RBP6.94□□□□□ -1.3
FN1-222ENST00000485567 SEPT3Q9UH03 358 aa6.94□□□□□ -1.3
FN1-222ENST00000485567 A6NJY4 79 aa6.93□□□□□ -1.3
FN1-222ENST00000485567 CDK2AP1O14519 115 aa6.93□□□□□ -1.3
FN1-222ENST00000485567 C21orf2O43822 256 aa6.93□□□□□ -1.3
FN1-222ENST00000485567 SMTNP53814 917 aa6.93□□□□□ -1.3
FN1-222ENST00000485567 MARSP56192 900 aaKnown RBP6.93□□□□□ -1.3
FN1-222ENST00000485567 MMRN1Q13201 1228 aa6.93□□□□□ -1.3
FN1-222ENST00000485567 ZNF697Q5TEC3 545 aa6.93□□□□□ -1.3
FN1-222ENST00000485567 SNIP1Q8TAD8 396 aaKnown RBP6.93□□□□□ -1.3
FN1-222ENST00000485567 SCHIP1Q9P0W5 487 aaPredicted RBP6.93□□□□□ -1.3
FN1-222ENST00000485567 BIN2Q9UBW5 565 aaPredicted RBP6.93□□□□□ -1.3
FN1-222ENST00000485567 SERTAD1Q9UHV2 236 aa6.93□□□□□ -1.3
FN1-222ENST00000485567 STAU1O95793 577 aaKnown RBP6.92□□□□□ -1.3
FN1-222ENST00000485567 ALDH1A1P00352 501 aa6.92□□□□□ -1.3
FN1-222ENST00000485567 ADH1AP07327 375 aa6.92□□□□□ -1.3
FN1-222ENST00000485567 NPR3P17342 541 aa6.92□□□□□ -1.3
FN1-222ENST00000485567 NNTQ13423 1086 aa6.92□□□□□ -1.3
FN1-222ENST00000485567 Q6ZVU0 165 aa6.92□□□□□ -1.3
FN1-222ENST00000485567 GLYCTKQ8IVS8 523 aa6.92□□□□□ -1.3
FN1-222ENST00000485567 VTI1AQ96AJ9 217 aa6.92□□□□□ -1.3
FN1-222ENST00000485567 PURBQ96QR8 312 aaKnown RBP6.92□□□□□ -1.3
FN1-222ENST00000485567 MKNK1Q9BUB5 465 aa6.92□□□□□ -1.3
FN1-222ENST00000485567 TSPAN10Q9H1Z9 355 aaPredicted RBP6.92□□□□□ -1.3
FN1-222ENST00000485567 PKD2L1Q9P0L9 805 aa6.92□□□□□ -1.3
FN1-222ENST00000485567 HRH3Q9Y5N1 445 aa6.92□□□□□ -1.3
FN1-222ENST00000485567 DNMT3AQ9Y6K1 912 aaPredicted RBP6.92□□□□□ -1.3
FN1-222ENST00000485567 WASF2Q9Y6W5 498 aa6.92□□□□□ -1.3
FN1-222ENST00000485567 V9GY48 417 aaPredicted RBP6.92□□□□□ -1.3
FN1-222ENST00000485567 RBM47A0AV96 593 aaKnown RBP6.91□□□□□ -1.3
FN1-222ENST00000485567 H3BRB1 525 aa6.91□□□□□ -1.3
FN1-222ENST00000485567 RBM25P49756 843 aaKnown RBP6.91□□□□□ -1.3
FN1-222ENST00000485567 ZNF211Q13398 564 aaPredicted RBP6.91□□□□□ -1.3
FN1-222ENST00000485567 ECM1Q16610 540 aa6.91□□□□□ -1.3
FN1-222ENST00000485567 CAPN12Q6ZSI9 719 aa6.91□□□□□ -1.3
FN1-222ENST00000485567 HELQQ8TDG4 1101 aa6.91□□□□□ -1.3
FN1-222ENST00000485567 ESYT1Q9BSJ8 1104 aa6.91□□□□□ -1.3
FN1-222ENST00000485567 KLF16Q9BXK1 252 aaPredicted RBP6.91□□□□□ -1.3
FN1-222ENST00000485567 TUT1Q9H6E5 874 aaKnown RBP6.91□□□□□ -1.3
FN1-222ENST00000485567 A0A0G2JS52 829 aa6.9□□□□□ -1.3
FN1-222ENST00000485567 A0A1W2PRU2 124 aa6.9□□□□□ -1.3
FN1-222ENST00000485567 E9PSI1 815 aa6.9□□□□□ -1.3
FN1-222ENST00000485567 PPP1R12BO60237 982 aaPredicted RBP6.9□□□□□ -1.3
FN1-222ENST00000485567 IL2RAP01589 272 aa6.9□□□□□ -1.3
FN1-222ENST00000485567 PSMA6P60900 246 aaKnown RBP6.9□□□□□ -1.3
FN1-222ENST00000485567 NOM1Q5C9Z4 860 aaKnown RBP6.9□□□□□ -1.3
FN1-222ENST00000485567 POTEAQ6S8J7 498 aa6.9□□□□□ -1.3
FN1-222ENST00000485567 SLC9A9Q8IVB4 645 aa6.9□□□□□ -1.3
FN1-222ENST00000485567 KDF1Q8NAX2 398 aaPredicted RBP6.9□□□□□ -1.3
FN1-222ENST00000485567 CNKSR1Q969H4 720 aa6.9□□□□□ -1.3
FN1-222ENST00000485567 C2orf49Q9BVC5 232 aaPredicted RBP6.9□□□□□ -1.3
FN1-222ENST00000485567 ARHGEF10LQ9HCE6 1279 aa6.9□□□□□ -1.3
FN1-222ENST00000485567 ANO2Q9NQ90 1003 aa6.9□□□□□ -1.3
FN1-222ENST00000485567 PTGIRP43119 386 aa6.89□□□□□ -1.31
FN1-222ENST00000485567 CLN3Q13286 438 aa6.89□□□□□ -1.31
FN1-222ENST00000485567 IQSEC3Q9UPP2 1182 aaPredicted RBP6.89□□□□□ -1.31
FN1-222ENST00000485567 GDF9O60383 454 aa6.88□□□□□ -1.31
FN1-222ENST00000485567 FAM13AO94988 1023 aa6.88□□□□□ -1.31
FN1-222ENST00000485567 ARHGAP4P98171 946 aa6.88□□□□□ -1.31
FN1-222ENST00000485567 FOXC1Q12948 553 aa6.88□□□□□ -1.31
FN1-222ENST00000485567 NAA30Q147X3 362 aaPredicted RBP6.88□□□□□ -1.31
FN1-222ENST00000485567 C16orf46Q6P387 395 aa6.88□□□□□ -1.31
FN1-222ENST00000485567 NBPF15Q8N660 670 aa6.88□□□□□ -1.31
FN1-222ENST00000485567 CHMP7Q8WUX9 453 aaPredicted RBP6.88□□□□□ -1.31
FN1-222ENST00000485567 ZNF428Q96B54 188 aa6.88□□□□□ -1.31
FN1-222ENST00000485567 PRKD2Q9BZL6 878 aa6.88□□□□□ -1.31
FN1-222ENST00000485567 RAB6BQ9NRW1 208 aa6.88□□□□□ -1.31
FN1-222ENST00000485567 DCTN4Q9UJW0 460 aa6.88□□□□□ -1.31
FN1-222ENST00000485567 CHMP3Q9Y3E7 222 aa6.88□□□□□ -1.31
FN1-222ENST00000485567 HIRAP54198 1017 aaPredicted RBP6.87□□□□□ -1.31
FN1-222ENST00000485567 CENPCQ03188 943 aa6.87□□□□□ -1.31
FN1-222ENST00000485567 CBLBQ13191 982 aa6.87□□□□□ -1.31
FN1-222ENST00000485567 TLR1Q15399 786 aa6.87□□□□□ -1.31
FN1-222ENST00000485567 TEAD4Q15561 434 aa6.87□□□□□ -1.31
FN1-222ENST00000485567 ITPKCQ96DU7 683 aa6.87□□□□□ -1.31
FN1-222ENST00000485567 MYO19Q96H55 970 aa6.87□□□□□ -1.31
FN1-222ENST00000485567 FHDC1Q9C0D6 1143 aaPredicted RBP6.87□□□□□ -1.31
FN1-222ENST00000485567 PLA2G2EQ9NZK7 142 aa6.87□□□□□ -1.31
FN1-222ENST00000485567 TTC24A2A3L6 582 aaPredicted RBP6.86□□□□□ -1.31
FN1-222ENST00000485567 ANKRD33BA6NCL7 494 aa6.86□□□□□ -1.31
FN1-222ENST00000485567 ZIC2O95409 532 aaPredicted RBP6.86□□□□□ -1.31
FN1-222ENST00000485567 WDR4P57081 412 aaKnown RBP6.86□□□□□ -1.31
FN1-222ENST00000485567 MTMR3Q13615 1198 aa6.86□□□□□ -1.31
FN1-222ENST00000485567 COL19A1Q14993 1142 aa6.86□□□□□ -1.31
FN1-222ENST00000485567 NPAS4Q8IUM7 802 aa6.86□□□□□ -1.31
FN1-222ENST00000485567 ZSCAN29Q8IWY8 852 aaPredicted RBP6.86□□□□□ -1.31
FN1-222ENST00000485567 CYP4X1Q8N118 509 aa6.86□□□□□ -1.31
FN1-222ENST00000485567 ASB16Q96NS5 453 aa6.86□□□□□ -1.31
FN1-222ENST00000485567 NLRP3Q96P20 1036 aa6.86□□□□□ -1.31
FN1-222ENST00000485567 TOR4AQ9NXH8 423 aa6.86□□□□□ -1.31
FN1-222ENST00000485567 SERTM1A2A2V5 107 aa6.85□□□□□ -1.31
FN1-222ENST00000485567 J3QL48 77 aa6.85□□□□□ -1.31
FN1-222ENST00000485567 TIMP2P16035 220 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms