RNA–Protein interactions for RNA: ENST00000485341.5

LSP1-216, Transcript of lymphocyte specific protein 1, humanhuman

TSL 2

Gene LSP1, Length 2,024 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-216ENST00000485341 COL16A1Q07092 1604 aaPredicted RBP19.46■□□□□ 0.71
LSP1-216ENST00000485341 RNMTO43148 476 aaKnown RBP19.46■□□□□ 0.71
LSP1-216ENST00000485341 ADAMTS2O95450 1211 aa19.46■□□□□ 0.71
LSP1-216ENST00000485341 RTL5Q5HYW3 569 aaPredicted RBP19.46■□□□□ 0.71
LSP1-216ENST00000485341 TMEM57Q8N5G2 664 aa19.46■□□□□ 0.71
LSP1-216ENST00000485341 LRRC37A3O60309 1634 aa19.45■□□□□ 0.7
LSP1-216ENST00000485341 MRPL50Q8N5N7 158 aaKnown RBP19.45■□□□□ 0.7
LSP1-216ENST00000485341 USP35Q9P2H5 1018 aa19.45■□□□□ 0.7
LSP1-216ENST00000485341 DAXXQ9UER7 740 aaPredicted RBP19.45■□□□□ 0.7
LSP1-216ENST00000485341 NUTM2BA6NNL0 878 aaPredicted RBP19.44■□□□□ 0.7
LSP1-216ENST00000485341 NUTM2EB1AL46 878 aaPredicted RBP19.44■□□□□ 0.7
LSP1-216ENST00000485341 NUTM2AQ8IVF1 878 aaPredicted RBP19.44■□□□□ 0.7
LSP1-216ENST00000485341 CERKQ8TCT0 537 aa19.44■□□□□ 0.7
LSP1-216ENST00000485341 ARHGAP45Q92619 1136 aa19.44■□□□□ 0.7
LSP1-216ENST00000485341 CARD10Q9BWT7 1032 aa19.44■□□□□ 0.7
LSP1-216ENST00000485341 ZBTB40Q9NUA8 1239 aa19.44■□□□□ 0.7
LSP1-216ENST00000485341 SPG7Q9UQ90 795 aa19.44■□□□□ 0.7
LSP1-216ENST00000485341 COL22A1Q8NFW1 1626 aaPredicted RBP19.43■□□□□ 0.7
LSP1-216ENST00000485341 KCNQ3O43525 872 aa19.42■□□□□ 0.7
LSP1-216ENST00000485341 PHKG2P15735 406 aa19.42■□□□□ 0.7
LSP1-216ENST00000485341 CHMP4BQ9H444 224 aaKnown RBP19.42■□□□□ 0.7
LSP1-216ENST00000485341 CYP27B1O15528 508 aa19.42■□□□□ 0.7
LSP1-216ENST00000485341 TEFQ10587 303 aa19.42■□□□□ 0.7
LSP1-216ENST00000485341 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.42■□□□□ 0.7
LSP1-216ENST00000485341 IFNL2Q8IZJ0 200 aa19.4■□□□□ 0.7
LSP1-216ENST00000485341 BTBD11A6QL63 1104 aa19.39■□□□□ 0.69
LSP1-216ENST00000485341 BABAM1Q9NWV8 329 aa19.39■□□□□ 0.69
LSP1-216ENST00000485341 IL2RBP14784 551 aa19.39■□□□□ 0.69
LSP1-216ENST00000485341 SMC5Q8IY18 1101 aa19.39■□□□□ 0.69
LSP1-216ENST00000485341 ZCRB1Q8TBF4 217 aaKnown RBP19.38■□□□□ 0.69
LSP1-216ENST00000485341 OVOS2A0A0G2JMS6 1433 aa19.38■□□□□ 0.69
LSP1-216ENST00000485341 KDM6AO15550 1401 aaPredicted RBP19.38■□□□□ 0.69
LSP1-216ENST00000485341 NECTIN2Q92692 538 aa19.37■□□□□ 0.69
LSP1-216ENST00000485341 UPF2Q9HAU5 1272 aaKnown RBP19.37■□□□□ 0.69
LSP1-216ENST00000485341 COL14A1Q05707 1796 aaKnown RBP19.37■□□□□ 0.69
LSP1-216ENST00000485341 EIF4A1P60842 406 aaKnown RBP19.36■□□□□ 0.69
LSP1-216ENST00000485341 NFATC2IPQ8NCF5 419 aa19.35■□□□□ 0.69
LSP1-216ENST00000485341 ABCC4O15439 1325 aa19.35■□□□□ 0.69
LSP1-216ENST00000485341 SLC4A2P04920 1241 aa19.35■□□□□ 0.69
LSP1-216ENST00000485341 DDX54Q8TDD1 881 aaKnown RBP19.35■□□□□ 0.69
LSP1-216ENST00000485341 SEC24BO95487 1268 aa19.34■□□□□ 0.69
LSP1-216ENST00000485341 PKD1L3Q7Z443 1732 aa19.34■□□□□ 0.69
LSP1-216ENST00000485341 DCAF5Q96JK2 942 aa19.34■□□□□ 0.69
LSP1-216ENST00000485341 API5Q9BZZ5 524 aaKnown RBP19.34■□□□□ 0.69
LSP1-216ENST00000485341 SLC52A2Q9HAB3 445 aa19.34■□□□□ 0.69
LSP1-216ENST00000485341 ZBTB7BO15156 539 aaPredicted RBP19.33■□□□□ 0.68
LSP1-216ENST00000485341 SLC39A6Q13433 755 aa19.33■□□□□ 0.68
LSP1-216ENST00000485341 SLC4A3P48751 1232 aa19.32■□□□□ 0.68
LSP1-216ENST00000485341 G2E3Q7L622 706 aa19.32■□□□□ 0.68
LSP1-216ENST00000485341 ADAMTS7Q9UKP4 1686 aa19.32■□□□□ 0.68
LSP1-216ENST00000485341 DEKP35659 375 aaKnown RBP19.32■□□□□ 0.68
LSP1-216ENST00000485341 PCDH11XQ9BZA7 1347 aa19.32■□□□□ 0.68
LSP1-216ENST00000485341 PCDH11YQ9BZA8 1340 aa19.32■□□□□ 0.68
LSP1-216ENST00000485341 PLEKHG2Q9H7P9 1386 aa19.31■□□□□ 0.68
LSP1-216ENST00000485341 EIF2S2P20042 333 aaKnown RBP19.3■□□□□ 0.68
LSP1-216ENST00000485341 NUCB1Q02818 461 aa19.3■□□□□ 0.68
LSP1-216ENST00000485341 PARP4Q9UKK3 1724 aaKnown RBP19.3■□□□□ 0.68
LSP1-216ENST00000485341 KDM3BQ7LBC6 1761 aa19.3■□□□□ 0.68
LSP1-216ENST00000485341 PRAMEF22A3QJZ6 481 aa19.3■□□□□ 0.68
LSP1-216ENST00000485341 HSP90AB1P08238 724 aaKnown RBP19.3■□□□□ 0.68
LSP1-216ENST00000485341 BECN1Q14457 450 aa19.3■□□□□ 0.68
LSP1-216ENST00000485341 SCN11AQ9UI33 1791 aa19.29■□□□□ 0.68
LSP1-216ENST00000485341 CCDC30Q5VVM6 783 aa19.29■□□□□ 0.68
LSP1-216ENST00000485341 TBC1D32Q96NH3 1257 aa19.29■□□□□ 0.68
LSP1-216ENST00000485341 CABP4P57796 275 aa19.29■□□□□ 0.68
LSP1-216ENST00000485341 HDGFL1Q5TGJ6 251 aa19.29■□□□□ 0.68
LSP1-216ENST00000485341 GCC1Q96CN9 775 aa19.29■□□□□ 0.68
LSP1-216ENST00000485341 JCADQ9P266 1359 aa19.28■□□□□ 0.68
LSP1-216ENST00000485341 SIPA1L3O60292 1781 aaPredicted RBP19.28■□□□□ 0.68
LSP1-216ENST00000485341 ZNF790Q6PG37 636 aa19.28■□□□□ 0.68
LSP1-216ENST00000485341 STK31Q9BXU1 1019 aa19.28■□□□□ 0.68
LSP1-216ENST00000485341 PLCH1Q4KWH8 1693 aa19.28■□□□□ 0.68
LSP1-216ENST00000485341 HSPA1LP34931 641 aa19.27■□□□□ 0.68
LSP1-216ENST00000485341 GIGYF1O75420 1035 aaPredicted RBP19.27■□□□□ 0.67
LSP1-216ENST00000485341 NKX1-1Q15270 411 aaPredicted RBP19.27■□□□□ 0.67
LSP1-216ENST00000485341 C8orf37Q96NL8 207 aa19.27■□□□□ 0.67
LSP1-216ENST00000485341 CHD1LQ86WJ1 897 aa19.26■□□□□ 0.67
LSP1-216ENST00000485341 RGS12O14924 1447 aa19.26■□□□□ 0.67
LSP1-216ENST00000485341 SOS1Q07889 1333 aaPredicted RBP19.25■□□□□ 0.67
LSP1-216ENST00000485341 DISP2A7MBM2 1401 aa19.25■□□□□ 0.67
LSP1-216ENST00000485341 HEG1Q9ULI3 1381 aa19.25■□□□□ 0.67
LSP1-216ENST00000485341 SPATA31A1Q5TZJ5 1347 aa19.25■□□□□ 0.67
LSP1-216ENST00000485341 SHANK3Q9BYB0 1731 aa19.25■□□□□ 0.67
LSP1-216ENST00000485341 F6X3S4 739 aa19.25■□□□□ 0.67
LSP1-216ENST00000485341 PTPRCP08575 1304 aa19.24■□□□□ 0.67
LSP1-216ENST00000485341 NGLY1Q96IV0 654 aa19.24■□□□□ 0.67
LSP1-216ENST00000485341 ANXA1P04083 346 aa19.24■□□□□ 0.67
LSP1-216ENST00000485341 ZNF496Q96IT1 587 aaPredicted RBP19.24■□□□□ 0.67
LSP1-216ENST00000485341 PHAXQ9H814 394 aaKnown RBP19.24■□□□□ 0.67
LSP1-216ENST00000485341 CHPF2Q9P2E5 772 aa19.24■□□□□ 0.67
LSP1-216ENST00000485341 CCDC9Q9Y3X0 531 aaKnown RBP19.24■□□□□ 0.67
LSP1-216ENST00000485341 SLIT2O94813 1529 aa19.24■□□□□ 0.67
LSP1-216ENST00000485341 NRAPQ86VF7 1730 aa19.23■□□□□ 0.67
LSP1-216ENST00000485341 HOXB7P09629 217 aa19.23■□□□□ 0.67
LSP1-216ENST00000485341 FLIIQ13045 1269 aa19.23■□□□□ 0.67
LSP1-216ENST00000485341 MRC1P22897 1456 aa19.22■□□□□ 0.67
LSP1-216ENST00000485341 ERVV-2B6SEH9 535 aa19.22■□□□□ 0.67
LSP1-216ENST00000485341 INTS3Q68E01 1043 aaKnown RBP19.22■□□□□ 0.67
LSP1-216ENST00000485341 LNPKQ9C0E8 428 aa19.22■□□□□ 0.67
LSP1-216ENST00000485341 SPATA31A5Q5VU36 1347 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms