RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 MMP10P09238 476 aa9.18□□□□□ -0.94
CAPN13-206ENST00000485248 ERBB3P21860 1342 aa9.18□□□□□ -0.94
CAPN13-206ENST00000485248 SSFA2P28290 1259 aa9.18□□□□□ -0.94
CAPN13-206ENST00000485248 NBR1Q14596 966 aa9.18□□□□□ -0.94
CAPN13-206ENST00000485248 DALRD3Q5D0E6 543 aaKnown RBP9.18□□□□□ -0.94
CAPN13-206ENST00000485248 DPY19L2Q6NUT2 758 aa9.18□□□□□ -0.94
CAPN13-206ENST00000485248 WBP1LQ9NX94 342 aa9.18□□□□□ -0.94
CAPN13-206ENST00000485248 GLTPD2A6NH11 291 aa9.17□□□□□ -0.94
CAPN13-206ENST00000485248 DPEP1P16444 411 aa9.17□□□□□ -0.94
CAPN13-206ENST00000485248 CHADLQ6NUI6 762 aa9.17□□□□□ -0.94
CAPN13-206ENST00000485248 PPARGC1BQ86YN6 1023 aaKnown RBP9.17□□□□□ -0.94
CAPN13-206ENST00000485248 TAF1LQ8IZX4 1826 aa9.17□□□□□ -0.94
CAPN13-206ENST00000485248 PALLDQ8WX93 1383 aa9.16□□□□□ -0.94
CAPN13-206ENST00000485248 TULP1O00294 542 aaPredicted RBP9.16□□□□□ -0.94
CAPN13-206ENST00000485248 VEGFBP49765 207 aa9.16□□□□□ -0.94
CAPN13-206ENST00000485248 PARP3Q9Y6F1 533 aa9.16□□□□□ -0.94
CAPN13-206ENST00000485248 TIAM2Q8IVF5 1701 aa9.15□□□□□ -0.94
CAPN13-206ENST00000485248 KIAA1551Q9HCM1 1747 aa9.15□□□□□ -0.94
CAPN13-206ENST00000485248 TMEM88BA6NKF7 163 aa9.15□□□□□ -0.94
CAPN13-206ENST00000485248 ANKRD24Q8TF21 1146 aa9.15□□□□□ -0.94
CAPN13-206ENST00000485248 BRCA1P38398 1863 aaKnown RBP9.15□□□□□ -0.95
CAPN13-206ENST00000485248 UBR3Q6ZT12 1888 aa9.15□□□□□ -0.95
CAPN13-206ENST00000485248 NSD2O96028 1365 aa9.14□□□□□ -0.95
CAPN13-206ENST00000485248 FAM208AQ9UK61 1670 aaKnown RBP9.14□□□□□ -0.95
CAPN13-206ENST00000485248 SMARCC1Q92922 1105 aaPredicted RBP9.14□□□□□ -0.95
CAPN13-206ENST00000485248 DCAF5Q96JK2 942 aa9.14□□□□□ -0.95
CAPN13-206ENST00000485248 VIRMAQ69YN4 1812 aaKnown RBP9.14□□□□□ -0.95
CAPN13-206ENST00000485248 LMNB1P20700 586 aa9.13□□□□□ -0.95
CAPN13-206ENST00000485248 NLGN1Q8N2Q7 840 aa9.13□□□□□ -0.95
CAPN13-206ENST00000485248 SPINK5Q9NQ38 1064 aaPredicted RBP9.13□□□□□ -0.95
CAPN13-206ENST00000485248 LTN1O94822 1766 aa9.13□□□□□ -0.95
CAPN13-206ENST00000485248 SBF1O95248 1867 aa9.13□□□□□ -0.95
CAPN13-206ENST00000485248 TTC21AQ8NDW8 1320 aa9.12□□□□□ -0.95
CAPN13-206ENST00000485248 GNPATO15228 680 aa9.12□□□□□ -0.95
CAPN13-206ENST00000485248 DEFB115Q30KQ5 88 aa9.12□□□□□ -0.95
CAPN13-206ENST00000485248 ZCRB1Q8TBF4 217 aaKnown RBP9.12□□□□□ -0.95
CAPN13-206ENST00000485248 MCOLN1Q9GZU1 580 aa9.12□□□□□ -0.95
CAPN13-206ENST00000485248 CABP1Q9NZU7 370 aa9.12□□□□□ -0.95
CAPN13-206ENST00000485248 ABT1Q9ULW3 272 aaKnown RBP9.12□□□□□ -0.95
CAPN13-206ENST00000485248 C4AP0C0L4 1744 aa9.11□□□□□ -0.95
CAPN13-206ENST00000485248 TOGARAM1Q9Y4F4 1720 aa9.11□□□□□ -0.95
CAPN13-206ENST00000485248 NFAT5O94916 1531 aa9.11□□□□□ -0.95
CAPN13-206ENST00000485248 LOC105371045A0A1W2PR82 267 aa9.11□□□□□ -0.95
CAPN13-206ENST00000485248 TMF1P82094 1093 aa9.11□□□□□ -0.95
CAPN13-206ENST00000485248 DGKZQ13574 1117 aa9.11□□□□□ -0.95
CAPN13-206ENST00000485248 MPRIPQ6WCQ1 1025 aa9.11□□□□□ -0.95
CAPN13-206ENST00000485248 SMIM5Q71RC9 77 aa9.11□□□□□ -0.95
CAPN13-206ENST00000485248 PLCD3Q8N3E9 789 aa9.11□□□□□ -0.95
CAPN13-206ENST00000485248 NBPF15Q8N660 670 aa9.11□□□□□ -0.95
CAPN13-206ENST00000485248 CABP2Q9NPB3 220 aa9.11□□□□□ -0.95
CAPN13-206ENST00000485248 WDR33Q9C0J8 1336 aaKnown RBP9.1□□□□□ -0.95
CAPN13-206ENST00000485248 ECE1P42892 770 aa9.1□□□□□ -0.95
CAPN13-206ENST00000485248 RASSF7Q02833 373 aa9.1□□□□□ -0.95
CAPN13-206ENST00000485248 GRM1Q13255 1194 aa9.1□□□□□ -0.95
CAPN13-206ENST00000485248 MPHOSPH9Q99550 1183 aa9.1□□□□□ -0.95
CAPN13-206ENST00000485248 ZNF692Q9BU19 519 aaPredicted RBP9.1□□□□□ -0.95
CAPN13-206ENST00000485248 PDE4DIPQ5VU43 2346 aa9.1□□□□□ -0.95
CAPN13-206ENST00000485248 TTC21BQ7Z4L5 1316 aa9.09□□□□□ -0.95
CAPN13-206ENST00000485248 IQCA1LA6NCM1 817 aa9.09□□□□□ -0.95
CAPN13-206ENST00000485248 TRAPPC3LQ5T215 181 aa9.09□□□□□ -0.95
CAPN13-206ENST00000485248 LTV1Q96GA3 475 aaPredicted RBP9.09□□□□□ -0.95
CAPN13-206ENST00000485248 GTF3C3Q9Y5Q9 886 aa9.09□□□□□ -0.95
CAPN13-206ENST00000485248 SOX10P56693 466 aa9.08□□□□□ -0.96
CAPN13-206ENST00000485248 LDHDQ86WU2 507 aa9.08□□□□□ -0.96
CAPN13-206ENST00000485248 DCAF11Q8TEB1 546 aa9.08□□□□□ -0.96
CAPN13-206ENST00000485248 CLEC11AQ9Y240 323 aa9.08□□□□□ -0.96
CAPN13-206ENST00000485248 RTCBQ9Y3I0 505 aaKnown RBP9.08□□□□□ -0.96
CAPN13-206ENST00000485248 RASSF10A6NK89 507 aa9.07□□□□□ -0.96
CAPN13-206ENST00000485248 DLL1O00548 723 aa9.07□□□□□ -0.96
CAPN13-206ENST00000485248 CA12O43570 354 aa9.07□□□□□ -0.96
CAPN13-206ENST00000485248 STAC3Q96MF2 364 aa9.07□□□□□ -0.96
CAPN13-206ENST00000485248 ZBTB12Q9Y330 459 aaPredicted RBP9.07□□□□□ -0.96
CAPN13-206ENST00000485248 PASKQ96RG2 1323 aa9.06□□□□□ -0.96
CAPN13-206ENST00000485248 RFC4P35249 363 aa9.06□□□□□ -0.96
CAPN13-206ENST00000485248 EAPPQ56P03 285 aaPredicted RBP9.06□□□□□ -0.96
CAPN13-206ENST00000485248 RAPGEF4Q8WZA2 1011 aa9.06□□□□□ -0.96
CAPN13-206ENST00000485248 CCDC88AQ3V6T2 1871 aa9.06□□□□□ -0.96
CAPN13-206ENST00000485248 CGNL1Q0VF96 1302 aa9.05□□□□□ -0.96
CAPN13-206ENST00000485248 PCDH11XQ9BZA7 1347 aa9.05□□□□□ -0.96
CAPN13-206ENST00000485248 PCDH11YQ9BZA8 1340 aa9.05□□□□□ -0.96
CAPN13-206ENST00000485248 KDM6AO15550 1401 aaPredicted RBP9.05□□□□□ -0.96
CAPN13-206ENST00000485248 KTN1Q86UP2 1357 aaKnown RBP9.05□□□□□ -0.96
CAPN13-206ENST00000485248 ATP6V1AP38606 617 aa9.05□□□□□ -0.96
CAPN13-206ENST00000485248 ERFEQ4G0M1 354 aa9.05□□□□□ -0.96
CAPN13-206ENST00000485248 AMIGO3Q86WK7 504 aa9.05□□□□□ -0.96
CAPN13-206ENST00000485248 TSKSQ9UJT2 592 aa9.05□□□□□ -0.96
CAPN13-206ENST00000485248 CIZ1Q9ULV3 898 aaPredicted RBP9.05□□□□□ -0.96
CAPN13-206ENST00000485248 CENPJQ9HC77 1338 aaPredicted RBP9.05□□□□□ -0.96
CAPN13-206ENST00000485248 LOC102724428A0A0B4J2F2 783 aa9.04□□□□□ -0.96
CAPN13-206ENST00000485248 KCNA3P22001 575 aa9.04□□□□□ -0.96
CAPN13-206ENST00000485248 SIK1P57059 783 aa9.04□□□□□ -0.96
CAPN13-206ENST00000485248 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.04□□□□□ -0.96
CAPN13-206ENST00000485248 LINC00116Q8NCU8 138 aa9.04□□□□□ -0.96
CAPN13-206ENST00000485248 GPR101Q96P66 508 aaPredicted RBP9.04□□□□□ -0.96
CAPN13-206ENST00000485248 TATP17735 454 aaPredicted RBP9.03□□□□□ -0.96
CAPN13-206ENST00000485248 CHRNA5P30532 468 aa9.03□□□□□ -0.96
CAPN13-206ENST00000485248 MIER1Q8N108 512 aa9.03□□□□□ -0.96
CAPN13-206ENST00000485248 CAPNS2Q96L46 248 aa9.03□□□□□ -0.96
CAPN13-206ENST00000485248 SMG6Q86US8 1419 aaKnown RBP9.03□□□□□ -0.96
CAPN13-206ENST00000485248 EVC2Q86UK5 1308 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms