RNA–Protein interactions for RNA: ENST00000485124.1

TMEM40-208, Transcript of transmembrane protein 40, humanhuman

TSL 5

Gene TMEM40, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-208ENST00000485124 CICQ96RK0 1608 aaPredicted RBP13.52□□□□□ -0.25
TMEM40-208ENST00000485124 KIF13BQ9NQT8 1826 aa13.51□□□□□ -0.25
TMEM40-208ENST00000485124 YBX3P16989 372 aaKnown RBP eCLIP13.51□□□□□ -0.25
TMEM40-208ENST00000485124 PLEKHO1Q53GL0 409 aaPredicted RBP13.51□□□□□ -0.25
TMEM40-208ENST00000485124 LINC00116Q8NCU8 138 aa13.51□□□□□ -0.25
TMEM40-208ENST00000485124 POLR3GLQ9BT43 218 aa13.51□□□□□ -0.25
TMEM40-208ENST00000485124 ATG3Q9NT62 314 aa13.51□□□□□ -0.25
TMEM40-208ENST00000485124 ADRA2BP18089 450 aa13.5□□□□□ -0.25
TMEM40-208ENST00000485124 ATP6V1AP38606 617 aa13.5□□□□□ -0.25
TMEM40-208ENST00000485124 TNNT2P45379 298 aaPredicted RBP13.5□□□□□ -0.25
TMEM40-208ENST00000485124 C1QTNF8P60827 252 aa13.5□□□□□ -0.25
TMEM40-208ENST00000485124 AMIGO3Q86WK7 504 aa13.5□□□□□ -0.25
TMEM40-208ENST00000485124 PELP1Q8IZL8 1130 aaKnown RBP13.5□□□□□ -0.25
TMEM40-208ENST00000485124 ITPK1Q13572 414 aa13.49□□□□□ -0.25
TMEM40-208ENST00000485124 RC3H1Q5TC82 1133 aaKnown RBP13.49□□□□□ -0.25
TMEM40-208ENST00000485124 MORC1Q86VD1 984 aa13.49□□□□□ -0.25
TMEM40-208ENST00000485124 KDM6AO15550 1401 aaPredicted RBP13.48□□□□□ -0.25
TMEM40-208ENST00000485124 SCN11AQ9UI33 1791 aa13.48□□□□□ -0.25
TMEM40-208ENST00000485124 CNTNAP4Q9C0A0 1308 aa13.48□□□□□ -0.25
TMEM40-208ENST00000485124 GNPATO15228 680 aa13.48□□□□□ -0.25
TMEM40-208ENST00000485124 PHF14O94880 888 aa13.48□□□□□ -0.25
TMEM40-208ENST00000485124 KNSTRNQ9Y448 316 aa13.48□□□□□ -0.25
TMEM40-208ENST00000485124 GIGYF1O75420 1035 aaPredicted RBP13.47□□□□□ -0.25
TMEM40-208ENST00000485124 ZNF530Q6P9A1 599 aaPredicted RBP13.47□□□□□ -0.25
TMEM40-208ENST00000485124 RTCBQ9Y3I0 505 aaKnown RBP13.47□□□□□ -0.25
TMEM40-208ENST00000485124 MYH14Q7Z406 1995 aaKnown RBP13.47□□□□□ -0.25
TMEM40-208ENST00000485124 ADCY9O60503 1353 aa13.46□□□□□ -0.25
TMEM40-208ENST00000485124 C1orf141Q5JVX7 400 aa13.46□□□□□ -0.25
TMEM40-208ENST00000485124 NLGN1Q8N2Q7 840 aa13.46□□□□□ -0.25
TMEM40-208ENST00000485124 C4AP0C0L4 1744 aa13.45□□□□□ -0.26
TMEM40-208ENST00000485124 KIAA1551Q9HCM1 1747 aa13.45□□□□□ -0.26
TMEM40-208ENST00000485124 CABP4P57796 275 aa13.45□□□□□ -0.26
TMEM40-208ENST00000485124 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
TMEM40-208ENST00000485124 TRAPPC3LQ5T215 181 aa13.45□□□□□ -0.26
TMEM40-208ENST00000485124 SLC4A9Q96Q91 983 aa13.45□□□□□ -0.26
TMEM40-208ENST00000485124 VIRMAQ69YN4 1812 aaKnown RBP13.44□□□□□ -0.26
TMEM40-208ENST00000485124 IL13P35225 146 aa13.44□□□□□ -0.26
TMEM40-208ENST00000485124 MTHFSP49914 203 aa13.44□□□□□ -0.26
TMEM40-208ENST00000485124 ATP10DQ9P241 1426 aa13.44□□□□□ -0.26
TMEM40-208ENST00000485124 CEP350Q5VT06 3117 aa13.43□□□□□ -0.26
TMEM40-208ENST00000485124 RPS6KA4O75676 772 aa13.43□□□□□ -0.26
TMEM40-208ENST00000485124 CENPBP07199 599 aaPredicted RBP13.43□□□□□ -0.26
TMEM40-208ENST00000485124 MMP10P09238 476 aa13.43□□□□□ -0.26
TMEM40-208ENST00000485124 BRCA1P38398 1863 aaKnown RBP13.43□□□□□ -0.26
TMEM40-208ENST00000485124 TGFB2P61812 414 aa13.43□□□□□ -0.26
TMEM40-208ENST00000485124 TJP1Q07157 1748 aa13.43□□□□□ -0.26
TMEM40-208ENST00000485124 SULT6B1Q6IMI4 303 aa13.43□□□□□ -0.26
TMEM40-208ENST00000485124 C10orf71Q711Q0 1435 aa13.43□□□□□ -0.26
TMEM40-208ENST00000485124 ADAMTS7Q9UKP4 1686 aa13.43□□□□□ -0.26
TMEM40-208ENST00000485124 MRC1P22897 1456 aa13.42□□□□□ -0.26
TMEM40-208ENST00000485124 SENP3-EIF4A1A0A087X0R7 540 aa13.42□□□□□ -0.26
TMEM40-208ENST00000485124 AKAP4Q5JQC9 854 aa13.42□□□□□ -0.26
TMEM40-208ENST00000485124 SMIM5Q71RC9 77 aa13.42□□□□□ -0.26
TMEM40-208ENST00000485124 AEBP1Q8IUX7 1158 aa13.42□□□□□ -0.26
TMEM40-208ENST00000485124 ARHGEF1Q92888 912 aaKnown RBP13.42□□□□□ -0.26
TMEM40-208ENST00000485124 RBM42Q9BTD8 480 aaKnown RBP13.42□□□□□ -0.26
TMEM40-208ENST00000485124 PXDNLA1KZ92 1463 aa13.42□□□□□ -0.26
TMEM40-208ENST00000485124 KIF7Q2M1P5 1343 aa13.41□□□□□ -0.26
TMEM40-208ENST00000485124 GYS1P13807 737 aa13.41□□□□□ -0.26
TMEM40-208ENST00000485124 NPC1L1Q9UHC9 1359 aa13.41□□□□□ -0.26
TMEM40-208ENST00000485124 N4BP2Q86UW6 1770 aaPredicted RBP13.4□□□□□ -0.26
TMEM40-208ENST00000485124 RFC4P35249 363 aa13.4□□□□□ -0.26
TMEM40-208ENST00000485124 NFATC2IPQ8NCF5 419 aa13.4□□□□□ -0.26
TMEM40-208ENST00000485124 ARFGEF1Q9Y6D6 1849 aa13.4□□□□□ -0.26
TMEM40-208ENST00000485124 PER1O15534 1290 aaPredicted RBP13.39□□□□□ -0.27
TMEM40-208ENST00000485124 SLC52A2Q9HAB3 445 aa13.39□□□□□ -0.27
TMEM40-208ENST00000485124 GPBP1L1Q9HC44 474 aaPredicted RBP13.39□□□□□ -0.27
TMEM40-208ENST00000485124 CCDC87Q9NVE4 849 aa13.39□□□□□ -0.27
TMEM40-208ENST00000485124 CRKLP46109 303 aaKnown RBP13.38□□□□□ -0.27
TMEM40-208ENST00000485124 USP42Q9H9J4 1324 aaKnown RBP13.38□□□□□ -0.27
TMEM40-208ENST00000485124 UBR2Q8IWV8 1755 aa13.37□□□□□ -0.27
TMEM40-208ENST00000485124 PTCD1O75127 700 aaKnown RBP13.37□□□□□ -0.27
TMEM40-208ENST00000485124 PARP3Q9Y6F1 533 aa13.37□□□□□ -0.27
TMEM40-208ENST00000485124 KCPQ6ZWJ8 1503 aa13.35□□□□□ -0.27
TMEM40-208ENST00000485124 RNMTO43148 476 aaKnown RBP13.35□□□□□ -0.27
TMEM40-208ENST00000485124 DIAPH1O60610 1272 aaKnown RBP13.35□□□□□ -0.27
TMEM40-208ENST00000485124 VSIG10Q8N0Z9 540 aa13.35□□□□□ -0.27
TMEM40-208ENST00000485124 COL3A1P02461 1466 aaPredicted RBP13.35□□□□□ -0.27
TMEM40-208ENST00000485124 INTS5Q6P9B9 1019 aaKnown RBP13.34□□□□□ -0.27
TMEM40-208ENST00000485124 NRXN2Q9P2S2 1712 aa13.33□□□□□ -0.27
TMEM40-208ENST00000485124 A0A0G2JLW4 131 aa13.33□□□□□ -0.28
TMEM40-208ENST00000485124 LGR6Q9HBX8 967 aa13.33□□□□□ -0.28
TMEM40-208ENST00000485124 BCS1LQ9Y276 419 aa13.33□□□□□ -0.28
TMEM40-208ENST00000485124 SOS1Q07889 1333 aaPredicted RBP13.33□□□□□ -0.28
TMEM40-208ENST00000485124 SIPA1L3O60292 1781 aaPredicted RBP13.32□□□□□ -0.28
TMEM40-208ENST00000485124 HMOX1P09601 288 aa13.32□□□□□ -0.28
TMEM40-208ENST00000485124 CYP19A1P11511 503 aaPredicted RBP13.32□□□□□ -0.28
TMEM40-208ENST00000485124 DPEP1P16444 411 aa13.32□□□□□ -0.28
TMEM40-208ENST00000485124 KCNA3P22001 575 aa13.32□□□□□ -0.28
TMEM40-208ENST00000485124 TM4SF1P30408 202 aa13.32□□□□□ -0.28
TMEM40-208ENST00000485124 MTHFSDQ2M296 383 aaKnown RBP13.32□□□□□ -0.28
TMEM40-208ENST00000485124 DNAJC10Q8IXB1 793 aa13.32□□□□□ -0.28
TMEM40-208ENST00000485124 AFDNP55196 1824 aaKnown RBP13.32□□□□□ -0.28
TMEM40-208ENST00000485124 DLEC1Q9Y238 1755 aa13.31□□□□□ -0.28
TMEM40-208ENST00000485124 ZPR1O75312 459 aa13.31□□□□□ -0.28
TMEM40-208ENST00000485124 FKBP8Q14318 412 aa13.31□□□□□ -0.28
TMEM40-208ENST00000485124 YTHDC1Q96MU7 727 aaKnown RBP13.31□□□□□ -0.28
TMEM40-208ENST00000485124 PIM2Q9P1W9 311 aa13.31□□□□□ -0.28
TMEM40-208ENST00000485124 WWC3Q9ULE0 1092 aa13.31□□□□□ -0.28
TMEM40-208ENST00000485124 POLRMTO00411 1230 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms