RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 CFAP45Q9UL16 551 aa18.82■□□□□ 0.6
PCDH17-202ENST00000484979 USP5P45974 858 aa18.81■□□□□ 0.6
PCDH17-202ENST00000484979 CRACR2BQ8N4Y2 399 aaPredicted RBP18.81■□□□□ 0.6
PCDH17-202ENST00000484979 RPGRQ92834 1020 aaKnown RBP18.81■□□□□ 0.6
PCDH17-202ENST00000484979 DZIP1Q86YF9 867 aaKnown RBP18.81■□□□□ 0.6
PCDH17-202ENST00000484979 FLIIQ13045 1269 aa18.81■□□□□ 0.6
PCDH17-202ENST00000484979 NAPBQ9H115 298 aa18.81■□□□□ 0.6
PCDH17-202ENST00000484979 UHRF1BP1LA0JNW5 1464 aa18.81■□□□□ 0.6
PCDH17-202ENST00000484979 POLR3DP05423 398 aaPredicted RBP18.8■□□□□ 0.6
PCDH17-202ENST00000484979 SLC5A1P13866 664 aa18.8■□□□□ 0.6
PCDH17-202ENST00000484979 SLF2Q8IX21 1173 aa18.8■□□□□ 0.6
PCDH17-202ENST00000484979 ANKRD24Q8TF21 1146 aa18.8■□□□□ 0.6
PCDH17-202ENST00000484979 MKNK2Q9HBH9 465 aa18.8■□□□□ 0.6
PCDH17-202ENST00000484979 DACH1Q9UI36 760 aa18.8■□□□□ 0.6
PCDH17-202ENST00000484979 TTC21AQ8NDW8 1320 aa18.8■□□□□ 0.6
PCDH17-202ENST00000484979 CCDC196A0A1B0GTZ2 297 aa18.8■□□□□ 0.6
PCDH17-202ENST00000484979 UBAP1LF5GYI3 381 aa18.8■□□□□ 0.6
PCDH17-202ENST00000484979 CDC5LQ99459 802 aaKnown RBP18.8■□□□□ 0.6
PCDH17-202ENST00000484979 BACH2Q9BYV9 841 aa18.8■□□□□ 0.6
PCDH17-202ENST00000484979 SPINK5Q9NQ38 1064 aaPredicted RBP18.8■□□□□ 0.6
PCDH17-202ENST00000484979 BOLA2Q9H3K6 86 aa18.8■□□□□ 0.6
PCDH17-202ENST00000484979 ZBTB3Q9H5J0 574 aa18.8■□□□□ 0.6
PCDH17-202ENST00000484979 ZNHIT6Q9NWK9 470 aaKnown RBP18.8■□□□□ 0.6
PCDH17-202ENST00000484979 WDR97A6NE52 1622 aa18.79■□□□□ 0.6
PCDH17-202ENST00000484979 CHRNA2Q15822 529 aa18.79■□□□□ 0.6
PCDH17-202ENST00000484979 AK7Q96M32 723 aa18.79■□□□□ 0.6
PCDH17-202ENST00000484979 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.79■□□□□ 0.6
PCDH17-202ENST00000484979 ARGLU1Q9NWB6 273 aaPredicted RBP18.79■□□□□ 0.6
PCDH17-202ENST00000484979 KDM5BQ9UGL1 1544 aa18.79■□□□□ 0.6
PCDH17-202ENST00000484979 SMC2O95347 1197 aa18.79■□□□□ 0.6
PCDH17-202ENST00000484979 DHX8Q14562 1220 aaKnown RBP18.79■□□□□ 0.6
PCDH17-202ENST00000484979 RUFY1Q96T51 708 aa18.79■□□□□ 0.6
PCDH17-202ENST00000484979 PDCL3Q9H2J4 239 aa18.79■□□□□ 0.6
PCDH17-202ENST00000484979 LUC7LQ9NQ29 371 aaKnown RBP18.79■□□□□ 0.6
PCDH17-202ENST00000484979 PTPRCP08575 1304 aa18.79■□□□□ 0.6
PCDH17-202ENST00000484979 F6X3S4 739 aa18.78■□□□□ 0.6
PCDH17-202ENST00000484979 SNRPA1P09661 255 aaKnown RBP18.78■□□□□ 0.6
PCDH17-202ENST00000484979 ZNF76P36508 570 aa18.78■□□□□ 0.6
PCDH17-202ENST00000484979 PAF1Q8N7H5 531 aa18.78■□□□□ 0.6
PCDH17-202ENST00000484979 ACBD3Q9H3P7 528 aa18.78■□□□□ 0.6
PCDH17-202ENST00000484979 PLCH2O75038 1416 aa18.78■□□□□ 0.6
PCDH17-202ENST00000484979 MINDY4BA8MYZ0 360 aa18.78■□□□□ 0.6
PCDH17-202ENST00000484979 CCDC192P0DO97 292 aa18.78■□□□□ 0.6
PCDH17-202ENST00000484979 BRPF1P55201 1214 aaPredicted RBP18.78■□□□□ 0.6
PCDH17-202ENST00000484979 MPHOSPH10O00566 681 aaKnown RBP18.77■□□□□ 0.6
PCDH17-202ENST00000484979 SSBP05455 408 aaKnown RBP eCLIP18.77■□□□□ 0.6
PCDH17-202ENST00000484979 GPTP24298 496 aa18.77■□□□□ 0.6
PCDH17-202ENST00000484979 LDHAL6AQ6ZMR3 332 aa18.77■□□□□ 0.6
PCDH17-202ENST00000484979 C6orf229H3BNL8 230 aa18.77■□□□□ 0.6
PCDH17-202ENST00000484979 LDHCP07864 332 aa18.77■□□□□ 0.6
PCDH17-202ENST00000484979 IQCA1Q86XH1 822 aa18.77■□□□□ 0.6
PCDH17-202ENST00000484979 CIZ1Q9ULV3 898 aaPredicted RBP18.77■□□□□ 0.6
PCDH17-202ENST00000484979 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.76■□□□□ 0.59
PCDH17-202ENST00000484979 PPP1R42Q7Z4L9 355 aa18.76■□□□□ 0.59
PCDH17-202ENST00000484979 C11orf95C9JLR9 678 aaPredicted RBP18.76■□□□□ 0.59
PCDH17-202ENST00000484979 HSP90AB2PQ58FF8 381 aa18.76■□□□□ 0.59
PCDH17-202ENST00000484979 TSPY26PQ9H489 355 aa18.76■□□□□ 0.59
PCDH17-202ENST00000484979 FAM43AQ8N2R8 423 aa18.76■□□□□ 0.59
PCDH17-202ENST00000484979 BCL11BQ9C0K0 894 aaPredicted RBP18.76■□□□□ 0.59
PCDH17-202ENST00000484979 CCDC39Q9UFE4 941 aa18.76■□□□□ 0.59
PCDH17-202ENST00000484979 RPRD2Q5VT52 1461 aaKnown RBP18.76■□□□□ 0.59
PCDH17-202ENST00000484979 ASXL2Q76L83 1435 aa18.75■□□□□ 0.59
PCDH17-202ENST00000484979 GPATCH8Q9UKJ3 1502 aaKnown RBP18.75■□□□□ 0.59
PCDH17-202ENST00000484979 TNMDQ9H2S6 317 aa18.75■□□□□ 0.59
PCDH17-202ENST00000484979 RNF41Q9H4P4 317 aaPredicted RBP18.75■□□□□ 0.59
PCDH17-202ENST00000484979 LRRFIP2Q9Y608 721 aaKnown RBP18.75■□□□□ 0.59
PCDH17-202ENST00000484979 CTCFLQ8NI51 663 aaPredicted RBP18.75■□□□□ 0.59
PCDH17-202ENST00000484979 ANKRD36BQ8N2N9 1353 aa18.75■□□□□ 0.59
PCDH17-202ENST00000484979 DDX46Q7L014 1031 aaKnown RBP18.75■□□□□ 0.59
PCDH17-202ENST00000484979 CWC25Q9NXE8 425 aaPredicted RBP18.75■□□□□ 0.59
PCDH17-202ENST00000484979 ZNF444Q8N0Y2 327 aaPredicted RBP18.74■□□□□ 0.59
PCDH17-202ENST00000484979 SERPINC1P01008 464 aa18.74■□□□□ 0.59
PCDH17-202ENST00000484979 SPATA32Q96LK8 384 aa18.74■□□□□ 0.59
PCDH17-202ENST00000484979 CCP110O43303 1012 aa18.74■□□□□ 0.59
PCDH17-202ENST00000484979 HSP90B2PQ58FF3 399 aa18.73■□□□□ 0.59
PCDH17-202ENST00000484979 CCDC8Q9H0W5 538 aaPredicted RBP18.73■□□□□ 0.59
PCDH17-202ENST00000484979 C19orf44Q9H6X5 657 aa18.73■□□□□ 0.59
PCDH17-202ENST00000484979 SEC63Q9UGP8 760 aaKnown RBP18.73■□□□□ 0.59
PCDH17-202ENST00000484979 MYO6Q9UM54 1294 aa18.73■□□□□ 0.59
PCDH17-202ENST00000484979 HMGB1P09429 215 aaKnown RBP18.73■□□□□ 0.59
PCDH17-202ENST00000484979 ZCRB1Q8TBF4 217 aaKnown RBP18.73■□□□□ 0.59
PCDH17-202ENST00000484979 CASTP20810 708 aaKnown RBP18.73■□□□□ 0.59
PCDH17-202ENST00000484979 RFC4P35249 363 aa18.73■□□□□ 0.59
PCDH17-202ENST00000484979 PI4KAP2A4QPH2 592 aa18.72■□□□□ 0.59
PCDH17-202ENST00000484979 PI4KAP1Q8N8J0 262 aa18.72■□□□□ 0.59
PCDH17-202ENST00000484979 CAGE1Q8TC20 777 aa18.72■□□□□ 0.59
PCDH17-202ENST00000484979 A2MP01023 1474 aa18.72■□□□□ 0.59
PCDH17-202ENST00000484979 UBE3BQ7Z3V4 1068 aa18.72■□□□□ 0.59
PCDH17-202ENST00000484979 RSPH6AQ9H0K4 717 aa18.72■□□□□ 0.59
PCDH17-202ENST00000484979 SMARCC1Q92922 1105 aaPredicted RBP18.72■□□□□ 0.59
PCDH17-202ENST00000484979 ECHDC1Q9NTX5 307 aa18.72■□□□□ 0.59
PCDH17-202ENST00000484979 CEP131Q9UPN4 1083 aa18.72■□□□□ 0.59
PCDH17-202ENST00000484979 IL16Q14005 1332 aa18.72■□□□□ 0.59
PCDH17-202ENST00000484979 ANKRD13DQ6ZTN6 518 aa18.71■□□□□ 0.59
PCDH17-202ENST00000484979 PPFIBP1Q86W92 1011 aa18.71■□□□□ 0.59
PCDH17-202ENST00000484979 ATP10BO94823 1461 aa18.71■□□□□ 0.59
PCDH17-202ENST00000484979 TEX35Q5T0J7 233 aa18.71■□□□□ 0.59
PCDH17-202ENST00000484979 HSP90AA2PQ14568 343 aaPredicted RBP18.7■□□□□ 0.58
PCDH17-202ENST00000484979 UPF3BQ9BZI7 483 aaKnown RBP18.7■□□□□ 0.58
PCDH17-202ENST00000484979 MAP3K2Q9Y2U5 619 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms