RNA–Protein interactions for RNA: ENST00000484958.5

FXR1-219, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 3

Gene FXR1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-219ENST00000484958 TMEM229AB2RXF0 380 aa11.09□□□□□ -0.63
FXR1-219ENST00000484958 Q6ZNB5 142 aa11.09□□□□□ -0.63
FXR1-219ENST00000484958 ZNF395Q9H8N7 513 aaPredicted RBP11.09□□□□□ -0.63
FXR1-219ENST00000484958 SENP2Q9HC62 589 aa11.09□□□□□ -0.63
FXR1-219ENST00000484958 AAASQ9NRG9 546 aa11.09□□□□□ -0.63
FXR1-219ENST00000484958 SMTNP53814 917 aa11.08□□□□□ -0.64
FXR1-219ENST00000484958 KDF1Q8NAX2 398 aaPredicted RBP11.08□□□□□ -0.64
FXR1-219ENST00000484958 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.08□□□□□ -0.64
FXR1-219ENST00000484958 HINFPQ9BQA5 517 aa11.08□□□□□ -0.64
FXR1-219ENST00000484958 POLMQ9NP87 494 aaPredicted RBP11.08□□□□□ -0.64
FXR1-219ENST00000484958 RAB6BQ9NRW1 208 aa11.08□□□□□ -0.64
FXR1-219ENST00000484958 RNF144AP50876 292 aaPredicted RBP11.07□□□□□ -0.64
FXR1-219ENST00000484958 TLR1Q15399 786 aa11.07□□□□□ -0.64
FXR1-219ENST00000484958 SLC27A3Q5K4L6 730 aa11.07□□□□□ -0.64
FXR1-219ENST00000484958 C6orf118Q5T5N4 469 aa11.07□□□□□ -0.64
FXR1-219ENST00000484958 GAS2L2Q8NHY3 880 aa11.07□□□□□ -0.64
FXR1-219ENST00000484958 KIFC2Q96AC6 838 aa11.07□□□□□ -0.64
FXR1-219ENST00000484958 ZMIZ1Q9ULJ6 1067 aa11.07□□□□□ -0.64
FXR1-219ENST00000484958 CHMP3Q9Y3E7 222 aa11.07□□□□□ -0.64
FXR1-219ENST00000484958 A6NJY4 79 aa11.06□□□□□ -0.64
FXR1-219ENST00000484958 SFI1A8K8P3 1242 aa11.06□□□□□ -0.64
FXR1-219ENST00000484958 DKK1O94907 266 aa11.06□□□□□ -0.64
FXR1-219ENST00000484958 IL2RAP01589 272 aa11.06□□□□□ -0.64
FXR1-219ENST00000484958 CENPCQ03188 943 aa11.06□□□□□ -0.64
FXR1-219ENST00000484958 RETREG2Q8NC44 543 aa11.06□□□□□ -0.64
FXR1-219ENST00000484958 ATP13A2Q9NQ11 1180 aa11.06□□□□□ -0.64
FXR1-219ENST00000484958 SERTAD1Q9UHV2 236 aa11.06□□□□□ -0.64
FXR1-219ENST00000484958 PDIA4P13667 645 aaKnown RBP11.05□□□□□ -0.64
FXR1-219ENST00000484958 TMEM164Q5U3C3 297 aa11.05□□□□□ -0.64
FXR1-219ENST00000484958 PURBQ96QR8 312 aaKnown RBP11.05□□□□□ -0.64
FXR1-219ENST00000484958 ZSCAN10Q96SZ4 725 aaPredicted RBP11.05□□□□□ -0.64
FXR1-219ENST00000484958 INSM2Q96T92 566 aaPredicted RBP11.05□□□□□ -0.64
FXR1-219ENST00000484958 TTLL8A6PVC2 850 aa11.04□□□□□ -0.64
FXR1-219ENST00000484958 CDK2AP1O14519 115 aa11.04□□□□□ -0.64
FXR1-219ENST00000484958 MTFR1Q15390 333 aa11.04□□□□□ -0.64
FXR1-219ENST00000484958 GNASQ5JWF2 1037 aa11.04□□□□□ -0.64
FXR1-219ENST00000484958 TMEM214Q6NUQ4 689 aaKnown RBP11.04□□□□□ -0.64
FXR1-219ENST00000484958 STK32AQ8WU08 396 aa11.04□□□□□ -0.64
FXR1-219ENST00000484958 BMP1P13497 986 aa11.03□□□□□ -0.64
FXR1-219ENST00000484958 CLP1Q92989 425 aaKnown RBP11.03□□□□□ -0.64
FXR1-219ENST00000484958 HRH3Q9Y5N1 445 aa11.03□□□□□ -0.64
FXR1-219ENST00000484958 ST8SIA5O15466 376 aa11.02□□□□□ -0.65
FXR1-219ENST00000484958 TRIM46Q7Z4K8 759 aa11.02□□□□□ -0.65
FXR1-219ENST00000484958 TSEN2Q8NCE0 465 aaKnown RBP11.02□□□□□ -0.65
FXR1-219ENST00000484958 ZFP42Q96MM3 310 aa11.02□□□□□ -0.65
FXR1-219ENST00000484958 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.02□□□□□ -0.65
FXR1-219ENST00000484958 SCHIP1Q9P0W5 487 aaPredicted RBP11.02□□□□□ -0.65
FXR1-219ENST00000484958 WDR44Q5JSH3 913 aa11.01□□□□□ -0.65
FXR1-219ENST00000484958 PPARGC1BQ86YN6 1023 aaKnown RBP11.01□□□□□ -0.65
FXR1-219ENST00000484958 GRIP2Q9C0E4 1043 aa11.01□□□□□ -0.65
FXR1-219ENST00000484958 TMEM88BA6NKF7 163 aa11□□□□□ -0.65
FXR1-219ENST00000484958 LYSMD3Q7Z3D4 306 aa11□□□□□ -0.65
FXR1-219ENST00000484958 NIFKQ9BYG3 293 aaKnown RBP11□□□□□ -0.65
FXR1-219ENST00000484958 SOS2Q07890 1332 aaPredicted RBP11□□□□□ -0.65
FXR1-219ENST00000484958 PATL2C9JE40 543 aaKnown RBP10.99□□□□□ -0.65
FXR1-219ENST00000484958 MAN1A2O60476 641 aa10.99□□□□□ -0.65
FXR1-219ENST00000484958 IGFBP4P22692 258 aa10.99□□□□□ -0.65
FXR1-219ENST00000484958 CTSOP43234 321 aaPredicted RBP10.99□□□□□ -0.65
FXR1-219ENST00000484958 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.99□□□□□ -0.65
FXR1-219ENST00000484958 TNS4Q8IZW8 715 aa10.99□□□□□ -0.65
FXR1-219ENST00000484958 RHBDD1Q8TEB9 315 aa10.99□□□□□ -0.65
FXR1-219ENST00000484958 TRAIPQ9BWF2 469 aa10.99□□□□□ -0.65
FXR1-219ENST00000484958 FHDC1Q9C0D6 1143 aaPredicted RBP10.99□□□□□ -0.65
FXR1-219ENST00000484958 MTMR7Q9Y216 660 aa10.99□□□□□ -0.65
FXR1-219ENST00000484958 SPATA31C2B4DYI2 1134 aa10.98□□□□□ -0.65
FXR1-219ENST00000484958 STAU1O95793 577 aaKnown RBP10.98□□□□□ -0.65
FXR1-219ENST00000484958 EPHA4P54764 986 aa10.98□□□□□ -0.65
FXR1-219ENST00000484958 PSMA6P60900 246 aaKnown RBP10.98□□□□□ -0.65
FXR1-219ENST00000484958 FAM69CQ0P6D2 419 aa10.98□□□□□ -0.65
FXR1-219ENST00000484958 STAG2Q8N3U4 1231 aa10.98□□□□□ -0.65
FXR1-219ENST00000484958 RNF217Q8TC41 542 aa10.98□□□□□ -0.65
FXR1-219ENST00000484958 VTI1AQ96AJ9 217 aa10.98□□□□□ -0.65
FXR1-219ENST00000484958 FOXO3O43524 673 aa10.97□□□□□ -0.65
FXR1-219ENST00000484958 TAS1R3Q7RTX0 852 aa10.97□□□□□ -0.65
FXR1-219ENST00000484958 SLC9A9Q8IVB4 645 aa10.97□□□□□ -0.65
FXR1-219ENST00000484958 ATAD2Q6PL18 1390 aa10.97□□□□□ -0.65
FXR1-219ENST00000484958 ATP2B4P23634 1241 aa10.96□□□□□ -0.65
FXR1-219ENST00000484958 WEE1P30291 646 aa10.96□□□□□ -0.65
FXR1-219ENST00000484958 FOXK2Q01167 660 aa10.96□□□□□ -0.65
FXR1-219ENST00000484958 FOXD4L5Q5VV16 416 aaPredicted RBP10.96□□□□□ -0.65
FXR1-219ENST00000484958 SCG3Q8WXD2 468 aaKnown RBP10.96□□□□□ -0.65
FXR1-219ENST00000484958 TRIM47Q96LD4 638 aa10.96□□□□□ -0.65
FXR1-219ENST00000484958 PPP1R12BO60237 982 aaPredicted RBP10.95□□□□□ -0.66
FXR1-219ENST00000484958 TSPAN10Q9H1Z9 355 aaPredicted RBP10.95□□□□□ -0.66
FXR1-219ENST00000484958 CABP1Q9NZU7 370 aa10.95□□□□□ -0.66
FXR1-219ENST00000484958 BRD1O95696 1058 aa10.94□□□□□ -0.66
FXR1-219ENST00000484958 TEAD4Q15561 434 aa10.94□□□□□ -0.66
FXR1-219ENST00000484958 NBPF1Q3BBV0 1214 aa10.94□□□□□ -0.66
FXR1-219ENST00000484958 C1orf216Q8TAB5 229 aa10.94□□□□□ -0.66
FXR1-219ENST00000484958 IQSEC3Q9UPP2 1182 aaPredicted RBP10.94□□□□□ -0.66
FXR1-219ENST00000484958 SERTM1A2A2V5 107 aa10.93□□□□□ -0.66
FXR1-219ENST00000484958 PRMT3O60678 531 aa10.93□□□□□ -0.66
FXR1-219ENST00000484958 PTCD1O75127 700 aaKnown RBP10.93□□□□□ -0.66
FXR1-219ENST00000484958 PRICKLE2Q7Z3G6 844 aa10.93□□□□□ -0.66
FXR1-219ENST00000484958 KCTD17Q8N5Z5 321 aa10.93□□□□□ -0.66
FXR1-219ENST00000484958 CXXC1Q9P0U4 656 aaPredicted RBP10.93□□□□□ -0.66
FXR1-219ENST00000484958 ZNF232Q9UNY5 417 aa10.93□□□□□ -0.66
FXR1-219ENST00000484958 FIGNL2A6NMB9 653 aa10.92□□□□□ -0.66
FXR1-219ENST00000484958 NBPF10Q6P3W6 841 aaKnown RBP10.92□□□□□ -0.66
FXR1-219ENST00000484958 DACH1Q9UI36 760 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms