RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 DBN1Q16643 649 aa8.95□□□□□ -0.98
SMC4-215ENST00000484799 SVOPQ8N4V2 548 aa8.95□□□□□ -0.98
SMC4-215ENST00000484799 GTPBP3Q969Y2 492 aaKnown RBP8.95□□□□□ -0.98
SMC4-215ENST00000484799 AIDAQ96BJ3 306 aa8.95□□□□□ -0.98
SMC4-215ENST00000484799 NUCKS1Q9H1E3 243 aaKnown RBP8.95□□□□□ -0.98
SMC4-215ENST00000484799 ETNK1Q9HBU6 452 aa8.95□□□□□ -0.98
SMC4-215ENST00000484799 GPAMQ9HCL2 828 aa8.95□□□□□ -0.98
SMC4-215ENST00000484799 CHIC2Q9UKJ5 165 aa8.95□□□□□ -0.98
SMC4-215ENST00000484799 BACH1O14867 736 aa8.94□□□□□ -0.98
SMC4-215ENST00000484799 MAP3K10Q02779 954 aa8.94□□□□□ -0.98
SMC4-215ENST00000484799 NFATC2IPQ8NCF5 419 aa8.94□□□□□ -0.98
SMC4-215ENST00000484799 RHBDD1Q8TEB9 315 aa8.94□□□□□ -0.98
SMC4-215ENST00000484799 PHF24Q9UPV7 400 aa8.94□□□□□ -0.98
SMC4-215ENST00000484799 PIK3CDO00329 1044 aa8.93□□□□□ -0.98
SMC4-215ENST00000484799 EFHC2Q5JST6 749 aa8.93□□□□□ -0.98
SMC4-215ENST00000484799 TRIM50Q86XT4 487 aa8.93□□□□□ -0.98
SMC4-215ENST00000484799 NIFKQ9BYG3 293 aaKnown RBP8.93□□□□□ -0.98
SMC4-215ENST00000484799 ENAMQ9NRM1 1142 aa8.93□□□□□ -0.98
SMC4-215ENST00000484799 CUEDC1Q9NWM3 386 aaPredicted RBP8.93□□□□□ -0.98
SMC4-215ENST00000484799 GPR25O00155 361 aa8.92□□□□□ -0.98
SMC4-215ENST00000484799 SMTNP53814 917 aa8.92□□□□□ -0.98
SMC4-215ENST00000484799 C4orf17Q53FE4 359 aa8.92□□□□□ -0.98
SMC4-215ENST00000484799 RNFT1Q5M7Z0 435 aa8.92□□□□□ -0.98
SMC4-215ENST00000484799 TBC1D9Q6ZT07 1266 aa8.92□□□□□ -0.98
SMC4-215ENST00000484799 PPARGC1BQ86YN6 1023 aaKnown RBP8.92□□□□□ -0.98
SMC4-215ENST00000484799 ZNF837Q96EG3 531 aaPredicted RBP8.92□□□□□ -0.98
SMC4-215ENST00000484799 STAU1O95793 577 aaKnown RBP8.91□□□□□ -0.98
SMC4-215ENST00000484799 MARSP56192 900 aaKnown RBP8.91□□□□□ -0.98
SMC4-215ENST00000484799 GTF2IP78347 998 aa8.91□□□□□ -0.98
SMC4-215ENST00000484799 SRSF11Q05519 484 aaKnown RBP8.91□□□□□ -0.98
SMC4-215ENST00000484799 NCOA4Q13772 614 aa8.91□□□□□ -0.98
SMC4-215ENST00000484799 DEPDC4Q8N2C3 294 aa8.91□□□□□ -0.98
SMC4-215ENST00000484799 POM121CA8CG34 1229 aa8.9□□□□□ -0.98
SMC4-215ENST00000484799 ADAMTS2O95450 1211 aa8.9□□□□□ -0.98
SMC4-215ENST00000484799 MX2P20592 715 aa8.9□□□□□ -0.98
SMC4-215ENST00000484799 PLA2G4AP47712 749 aa8.9□□□□□ -0.98
SMC4-215ENST00000484799 ATP1A2P50993 1020 aa8.9□□□□□ -0.98
SMC4-215ENST00000484799 KRT76Q01546 638 aa8.9□□□□□ -0.98
SMC4-215ENST00000484799 PROSER2Q86WR7 435 aaPredicted RBP8.9□□□□□ -0.98
SMC4-215ENST00000484799 CLUAP1Q96AJ1 413 aa8.9□□□□□ -0.98
SMC4-215ENST00000484799 FHDC1Q9C0D6 1143 aaPredicted RBP8.9□□□□□ -0.98
SMC4-215ENST00000484799 MBIPQ9NS73 344 aa8.9□□□□□ -0.98
SMC4-215ENST00000484799 CABP1Q9NZU7 370 aa8.9□□□□□ -0.98
SMC4-215ENST00000484799 HRH3Q9Y5N1 445 aa8.9□□□□□ -0.98
SMC4-215ENST00000484799 USP17L5A8MUK1 530 aa8.89□□□□□ -0.99
SMC4-215ENST00000484799 MSX1P28360 303 aa8.89□□□□□ -0.99
SMC4-215ENST00000484799 NBPF1Q3BBV0 1214 aa8.89□□□□□ -0.99
SMC4-215ENST00000484799 GJA3Q9Y6H8 435 aa8.89□□□□□ -0.99
SMC4-215ENST00000484799 A6NJY4 79 aa8.88□□□□□ -0.99
SMC4-215ENST00000484799 TATP17735 454 aaPredicted RBP8.88□□□□□ -0.99
SMC4-215ENST00000484799 SCNN1DP51172 638 aa8.88□□□□□ -0.99
SMC4-215ENST00000484799 LBRQ14739 615 aaKnown RBP8.88□□□□□ -0.99
SMC4-215ENST00000484799 ARSJQ5FYB0 599 aaPredicted RBP8.88□□□□□ -0.99
SMC4-215ENST00000484799 RUBCNLQ9H714 662 aa8.88□□□□□ -0.99
SMC4-215ENST00000484799 NEUROD4Q9HD90 331 aa8.88□□□□□ -0.99
SMC4-215ENST00000484799 CDK2AP1O14519 115 aa8.87□□□□□ -0.99
SMC4-215ENST00000484799 LORP23490 312 aaPredicted RBP8.87□□□□□ -0.99
SMC4-215ENST00000484799 CALR3Q96L12 384 aaKnown RBP8.87□□□□□ -0.99
SMC4-215ENST00000484799 CFHR5Q9BXR6 569 aa8.87□□□□□ -0.99
SMC4-215ENST00000484799 CHMP3Q9Y3E7 222 aa8.87□□□□□ -0.99
SMC4-215ENST00000484799 PCDHGA11Q9Y5H2 935 aa8.87□□□□□ -0.99
SMC4-215ENST00000484799 SLURP2P0DP57 97 aa8.86□□□□□ -0.99
SMC4-215ENST00000484799 FIGNL1Q6PIW4 674 aa8.86□□□□□ -0.99
SMC4-215ENST00000484799 NEDD1Q8NHV4 660 aa8.86□□□□□ -0.99
SMC4-215ENST00000484799 C1orf216Q8TAB5 229 aa8.86□□□□□ -0.99
SMC4-215ENST00000484799 ADAMTS8Q9UP79 889 aa8.86□□□□□ -0.99
SMC4-215ENST00000484799 IGF1RP08069 1367 aa8.86□□□□□ -0.99
SMC4-215ENST00000484799 RNF225M0QZC1 329 aaPredicted RBP8.85□□□□□ -0.99
SMC4-215ENST00000484799 ATP9BO43861 1147 aa8.85□□□□□ -0.99
SMC4-215ENST00000484799 ZNF385CQ66K41 422 aaPredicted RBP8.85□□□□□ -0.99
SMC4-215ENST00000484799 BICDL1Q6ZP65 573 aa8.85□□□□□ -0.99
SMC4-215ENST00000484799 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.85□□□□□ -0.99
SMC4-215ENST00000484799 SLC4A9Q96Q91 983 aa8.85□□□□□ -0.99
SMC4-215ENST00000484799 MKRN1Q9UHC7 482 aaKnown RBP8.85□□□□□ -0.99
SMC4-215ENST00000484799 USP17L3A6NCW0 530 aa8.84□□□□□ -0.99
SMC4-215ENST00000484799 USP17L4A6NCW7 530 aa8.84□□□□□ -0.99
SMC4-215ENST00000484799 MAP2K3P46734 347 aa8.84□□□□□ -0.99
SMC4-215ENST00000484799 USP17L2Q6R6M4 530 aa8.84□□□□□ -0.99
SMC4-215ENST00000484799 USP17L1Q7RTZ2 530 aa8.84□□□□□ -0.99
SMC4-215ENST00000484799 GLMNQ92990 594 aa8.84□□□□□ -0.99
SMC4-215ENST00000484799 DNAAF2Q9NVR5 837 aaKnown RBP8.84□□□□□ -0.99
SMC4-215ENST00000484799 ZNF232Q9UNY5 417 aa8.84□□□□□ -0.99
SMC4-215ENST00000484799 TMEM229AB2RXF0 380 aa8.83□□□□□ -1
SMC4-215ENST00000484799 GAS6Q14393 721 aa8.83□□□□□ -1
SMC4-215ENST00000484799 CCDC102BQ68D86 513 aa8.83□□□□□ -1
SMC4-215ENST00000484799 PLEKHM2Q8IWE5 1019 aa8.83□□□□□ -1
SMC4-215ENST00000484799 TPCN2Q8NHX9 752 aa8.83□□□□□ -1
SMC4-215ENST00000484799 TFIP11Q9UBB9 837 aaKnown RBP8.83□□□□□ -1
SMC4-215ENST00000484799 PALM3A6NDB9 673 aaPredicted RBP8.82□□□□□ -1
SMC4-215ENST00000484799 BMP4P12644 408 aa8.82□□□□□ -1
SMC4-215ENST00000484799 LARP1Q6PKG0 1096 aaKnown RBP8.82□□□□□ -1
SMC4-215ENST00000484799 LYPD4Q6UWN0 246 aa8.82□□□□□ -1
SMC4-215ENST00000484799 WHAMMQ8TF30 809 aa8.82□□□□□ -1
SMC4-215ENST00000484799 SCARF2Q96GP6 870 aaPredicted RBP8.82□□□□□ -1
SMC4-215ENST00000484799 ZNF358Q9NW07 568 aa8.82□□□□□ -1
SMC4-215ENST00000484799 A6NJR5 290 aa8.81□□□□□ -1
SMC4-215ENST00000484799 CELA2BP08218 269 aaPredicted RBP8.81□□□□□ -1
SMC4-215ENST00000484799 RASA1P20936 1047 aa8.81□□□□□ -1
SMC4-215ENST00000484799 LARGE2Q8N3Y3 721 aa8.81□□□□□ -1
SMC4-215ENST00000484799 OGFOD1Q8N543 542 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms