RNA–Protein interactions for RNA: ENST00000484545.1

NELFA-214, Transcript of negative elongation factor complex member A, humanhuman

TSL 3

Gene NELFA, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-214ENST00000484545 CFAP53Q96M91 514 aa22.49■■□□□ 1.19
NELFA-214ENST00000484545 SYT17Q9BSW7 474 aa22.49■■□□□ 1.19
NELFA-214ENST00000484545 FHDC1Q9C0D6 1143 aaPredicted RBP22.49■■□□□ 1.19
NELFA-214ENST00000484545 U2SURPO15042 1029 aaKnown RBP22.48■■□□□ 1.19
NELFA-214ENST00000484545 POLD1P28340 1107 aa22.48■■□□□ 1.19
NELFA-214ENST00000484545 SLC4A9Q96Q91 983 aa22.48■■□□□ 1.19
NELFA-214ENST00000484545 MSH5O43196 834 aa22.47■■□□□ 1.19
NELFA-214ENST00000484545 C4BP0C0L5 1744 aa22.46■■□□□ 1.19
NELFA-214ENST00000484545 TUBGCP6Q96RT7 1819 aa22.46■■□□□ 1.19
NELFA-214ENST00000484545 LGR6Q9HBX8 967 aa22.46■■□□□ 1.19
NELFA-214ENST00000484545 MAP3K5Q99683 1374 aa22.46■■□□□ 1.19
NELFA-214ENST00000484545 TAF1LQ8IZX4 1826 aa22.45■■□□□ 1.19
NELFA-214ENST00000484545 RNMTO43148 476 aaKnown RBP22.45■■□□□ 1.18
NELFA-214ENST00000484545 SSFA2P28290 1259 aa22.45■■□□□ 1.18
NELFA-214ENST00000484545 AMIGO3Q86WK7 504 aa22.45■■□□□ 1.18
NELFA-214ENST00000484545 RBM42Q9BTD8 480 aaKnown RBP22.45■■□□□ 1.18
NELFA-214ENST00000484545 COL24A1Q17RW2 1714 aa22.44■■□□□ 1.18
NELFA-214ENST00000484545 SLC52A2Q9HAB3 445 aa22.44■■□□□ 1.18
NELFA-214ENST00000484545 NUDCQ9Y266 331 aa22.44■■□□□ 1.18
NELFA-214ENST00000484545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.43■■□□□ 1.18
NELFA-214ENST00000484545 DCAF8L1A6NGE4 600 aa22.43■■□□□ 1.18
NELFA-214ENST00000484545 RC3H1Q5TC82 1133 aaKnown RBP22.43■■□□□ 1.18
NELFA-214ENST00000484545 ZNF831Q5JPB2 1677 aa22.42■■□□□ 1.18
NELFA-214ENST00000484545 GNPATO15228 680 aa22.41■■□□□ 1.18
NELFA-214ENST00000484545 GAS2L2Q8NHY3 880 aa22.41■■□□□ 1.18
NELFA-214ENST00000484545 PTCD1O75127 700 aaKnown RBP22.4■■□□□ 1.18
NELFA-214ENST00000484545 SMIM5Q71RC9 77 aa22.4■■□□□ 1.18
NELFA-214ENST00000484545 RSPH6AQ9H0K4 717 aa22.4■■□□□ 1.18
NELFA-214ENST00000484545 CNTNAP4Q9C0A0 1308 aa22.39■■□□□ 1.18
NELFA-214ENST00000484545 PHF14O94880 888 aa22.39■■□□□ 1.17
NELFA-214ENST00000484545 MRC1P22897 1456 aa22.39■■□□□ 1.17
NELFA-214ENST00000484545 SCN11AQ9UI33 1791 aa22.38■■□□□ 1.17
NELFA-214ENST00000484545 MSL1Q68DK7 614 aa22.38■■□□□ 1.17
NELFA-214ENST00000484545 RTCBQ9Y3I0 505 aaKnown RBP22.38■■□□□ 1.17
NELFA-214ENST00000484545 ADAMTS7Q9UKP4 1686 aa22.37■■□□□ 1.17
NELFA-214ENST00000484545 GNAT3A8MTJ3 354 aa22.37■■□□□ 1.17
NELFA-214ENST00000484545 FCHSD2O94868 740 aa22.37■■□□□ 1.17
NELFA-214ENST00000484545 U2AF1L5P0DN76 240 aaPredicted RBP22.37■■□□□ 1.17
NELFA-214ENST00000484545 PRKAR2BP31323 418 aa22.37■■□□□ 1.17
NELFA-214ENST00000484545 U2AF1Q01081 240 aaKnown RBP eCLIP22.37■■□□□ 1.17
NELFA-214ENST00000484545 PHACTR3Q96KR7 559 aa22.37■■□□□ 1.17
NELFA-214ENST00000484545 RPS6KA4O75676 772 aa22.36■■□□□ 1.17
NELFA-214ENST00000484545 ADRA2BP18089 450 aa22.36■■□□□ 1.17
NELFA-214ENST00000484545 IL17REQ8NFR9 667 aa22.36■■□□□ 1.17
NELFA-214ENST00000484545 UBR3Q6ZT12 1888 aa22.36■■□□□ 1.17
NELFA-214ENST00000484545 TRAPPC3LQ5T215 181 aa22.35■■□□□ 1.17
NELFA-214ENST00000484545 SLC39A6Q13433 755 aa22.33■■□□□ 1.17
NELFA-214ENST00000484545 CRKLP46109 303 aaKnown RBP22.32■■□□□ 1.16
NELFA-214ENST00000484545 DDX10Q13206 875 aaKnown RBP22.32■■□□□ 1.16
NELFA-214ENST00000484545 KLHL34Q8N239 644 aa22.32■■□□□ 1.16
NELFA-214ENST00000484545 ARHGEF1Q92888 912 aaKnown RBP22.32■■□□□ 1.16
NELFA-214ENST00000484545 RALBP1Q15311 655 aa22.31■■□□□ 1.16
NELFA-214ENST00000484545 VSIG10Q8N0Z9 540 aa22.31■■□□□ 1.16
NELFA-214ENST00000484545 CD2APQ9Y5K6 639 aa22.31■■□□□ 1.16
NELFA-214ENST00000484545 CEMIPQ8WUJ3 1361 aa22.3■■□□□ 1.16
NELFA-214ENST00000484545 TEFQ10587 303 aa22.3■■□□□ 1.16
NELFA-214ENST00000484545 COL5A3P25940 1745 aaPredicted RBP22.3■■□□□ 1.16
NELFA-214ENST00000484545 CICQ96RK0 1608 aaPredicted RBP22.3■■□□□ 1.16
NELFA-214ENST00000484545 INTS5Q6P9B9 1019 aaKnown RBP22.29■■□□□ 1.16
NELFA-214ENST00000484545 DNAJC10Q8IXB1 793 aa22.29■■□□□ 1.16
NELFA-214ENST00000484545 NLGN1Q8N2Q7 840 aa22.29■■□□□ 1.16
NELFA-214ENST00000484545 NLGN2Q8NFZ4 835 aa22.29■■□□□ 1.16
NELFA-214ENST00000484545 KCPQ6ZWJ8 1503 aa22.28■■□□□ 1.16
NELFA-214ENST00000484545 CYP19A1P11511 503 aaPredicted RBP22.28■■□□□ 1.16
NELFA-214ENST00000484545 RFC4P35249 363 aa22.28■■□□□ 1.16
NELFA-214ENST00000484545 HTATSF1O43719 755 aaKnown RBP22.27■■□□□ 1.16
NELFA-214ENST00000484545 TTC5Q8N0Z6 440 aa22.27■■□□□ 1.16
NELFA-214ENST00000484545 ZNF790Q6PG37 636 aa22.26■■□□□ 1.15
NELFA-214ENST00000484545 CCDC87Q9NVE4 849 aa22.26■■□□□ 1.15
NELFA-214ENST00000484545 TJP1Q07157 1748 aa22.26■■□□□ 1.15
NELFA-214ENST00000484545 GYS1P13807 737 aa22.25■■□□□ 1.15
NELFA-214ENST00000484545 YY1P25490 414 aa22.25■■□□□ 1.15
NELFA-214ENST00000484545 MMP10P09238 476 aa22.24■■□□□ 1.15
NELFA-214ENST00000484545 ZEB1P37275 1124 aaPredicted RBP22.24■■□□□ 1.15
NELFA-214ENST00000484545 GPR162Q16538 588 aa22.24■■□□□ 1.15
NELFA-214ENST00000484545 RTF1Q92541 710 aaKnown RBP22.23■■□□□ 1.15
NELFA-214ENST00000484545 ZNF496Q96IT1 587 aaPredicted RBP22.23■■□□□ 1.15
NELFA-214ENST00000484545 PLEKHF1Q96S99 279 aa22.23■■□□□ 1.15
NELFA-214ENST00000484545 MYH14Q7Z406 1995 aaKnown RBP22.23■■□□□ 1.15
NELFA-214ENST00000484545 TEX13AQ9BXU3 409 aaPredicted RBP22.22■■□□□ 1.15
NELFA-214ENST00000484545 SOS1Q07889 1333 aaPredicted RBP22.22■■□□□ 1.15
NELFA-214ENST00000484545 BTBD11A6QL63 1104 aa22.21■■□□□ 1.15
NELFA-214ENST00000484545 STARD3NLO95772 234 aa22.21■■□□□ 1.15
NELFA-214ENST00000484545 NEFMP07197 916 aa22.21■■□□□ 1.15
NELFA-214ENST00000484545 PNNQ9H307 717 aaKnown RBP22.21■■□□□ 1.15
NELFA-214ENST00000484545 USP42Q9H9J4 1324 aaKnown RBP22.21■■□□□ 1.15
NELFA-214ENST00000484545 HEG1Q9ULI3 1381 aa22.21■■□□□ 1.15
NELFA-214ENST00000484545 MCM10Q7L590 875 aa22.2■■□□□ 1.14
NELFA-214ENST00000484545 FMNL2Q96PY5 1086 aa22.2■■□□□ 1.14
NELFA-214ENST00000484545 VIRMAQ69YN4 1812 aaKnown RBP22.2■■□□□ 1.14
NELFA-214ENST00000484545 SRP68Q9UHB9 627 aaKnown RBP22.19■■□□□ 1.14
NELFA-214ENST00000484545 ZBTB1Q9Y2K1 713 aa22.19■■□□□ 1.14
NELFA-214ENST00000484545 MYBBP1AQ9BQG0 1328 aaKnown RBP22.19■■□□□ 1.14
NELFA-214ENST00000484545 UBR2Q8IWV8 1755 aa22.18■■□□□ 1.14
NELFA-214ENST00000484545 SIPA1L3O60292 1781 aaPredicted RBP22.17■■□□□ 1.14
NELFA-214ENST00000484545 KCNQ3O43525 872 aa22.17■■□□□ 1.14
NELFA-214ENST00000484545 GRIN3BO60391 1043 aa22.17■■□□□ 1.14
NELFA-214ENST00000484545 DCTN1Q14203 1278 aa22.17■■□□□ 1.14
NELFA-214ENST00000484545 FKBP8Q14318 412 aa22.17■■□□□ 1.14
NELFA-214ENST00000484545 YBX3P16989 372 aaKnown RBP eCLIP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms