RNA–Protein interactions for RNA: ENST00000484476.5

LDLRAP1-205, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 1 (best)

Gene LDLRAP1, Length 657 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-205ENST00000484476 SGIP1Q9BQI5 828 aa18.7■□□□□ 0.58
LDLRAP1-205ENST00000484476 GNPATO15228 680 aa18.69■□□□□ 0.58
LDLRAP1-205ENST00000484476 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.68■□□□□ 0.58
LDLRAP1-205ENST00000484476 SSFA2P28290 1259 aa18.68■□□□□ 0.58
LDLRAP1-205ENST00000484476 RTCBQ9Y3I0 505 aaKnown RBP18.68■□□□□ 0.58
LDLRAP1-205ENST00000484476 PTCD1O75127 700 aaKnown RBP18.67■□□□□ 0.58
LDLRAP1-205ENST00000484476 TRAPPC3LQ5T215 181 aa18.67■□□□□ 0.58
LDLRAP1-205ENST00000484476 LINC00116Q8NCU8 138 aa18.67■□□□□ 0.58
LDLRAP1-205ENST00000484476 GAS2L2Q8NHY3 880 aa18.67■□□□□ 0.58
LDLRAP1-205ENST00000484476 NEFMP07197 916 aa18.66■□□□□ 0.58
LDLRAP1-205ENST00000484476 MSL1Q68DK7 614 aa18.66■□□□□ 0.58
LDLRAP1-205ENST00000484476 ITGB4P16144 1822 aa18.65■□□□□ 0.58
LDLRAP1-205ENST00000484476 ITPK1Q13572 414 aa18.65■□□□□ 0.58
LDLRAP1-205ENST00000484476 GPR162Q16538 588 aa18.65■□□□□ 0.58
LDLRAP1-205ENST00000484476 MTHFSDQ2M296 383 aaKnown RBP18.65■□□□□ 0.58
LDLRAP1-205ENST00000484476 U2AF1L5P0DN76 240 aaPredicted RBP18.64■□□□□ 0.57
LDLRAP1-205ENST00000484476 YY1P25490 414 aa18.64■□□□□ 0.57
LDLRAP1-205ENST00000484476 PPP2R1AP30153 589 aa18.64■□□□□ 0.57
LDLRAP1-205ENST00000484476 U2AF1Q01081 240 aaKnown RBP eCLIP18.64■□□□□ 0.57
LDLRAP1-205ENST00000484476 RC3H1Q5TC82 1133 aaKnown RBP18.64■□□□□ 0.57
LDLRAP1-205ENST00000484476 SLC52A2Q9HAB3 445 aa18.64■□□□□ 0.57
LDLRAP1-205ENST00000484476 TOGARAM1Q9Y4F4 1720 aa18.63■□□□□ 0.57
LDLRAP1-205ENST00000484476 GNAT3A8MTJ3 354 aa18.63■□□□□ 0.57
LDLRAP1-205ENST00000484476 RNMTO43148 476 aaKnown RBP18.63■□□□□ 0.57
LDLRAP1-205ENST00000484476 RFC4P35249 363 aa18.63■□□□□ 0.57
LDLRAP1-205ENST00000484476 TEFQ10587 303 aa18.63■□□□□ 0.57
LDLRAP1-205ENST00000484476 PELP1Q8IZL8 1130 aaKnown RBP18.63■□□□□ 0.57
LDLRAP1-205ENST00000484476 MAP3K5Q99683 1374 aa18.63■□□□□ 0.57
LDLRAP1-205ENST00000484476 KDM6AO15550 1401 aaPredicted RBP18.63■□□□□ 0.57
LDLRAP1-205ENST00000484476 ADRA2BP18089 450 aa18.62■□□□□ 0.57
LDLRAP1-205ENST00000484476 TTC5Q8N0Z6 440 aa18.62■□□□□ 0.57
LDLRAP1-205ENST00000484476 LGR6Q9HBX8 967 aa18.62■□□□□ 0.57
LDLRAP1-205ENST00000484476 C5P01031 1676 aa18.62■□□□□ 0.57
LDLRAP1-205ENST00000484476 QSER1Q2KHR3 1735 aa18.61■□□□□ 0.57
LDLRAP1-205ENST00000484476 C4BP0C0L5 1744 aa18.6■□□□□ 0.57
LDLRAP1-205ENST00000484476 NLGN1Q8N2Q7 840 aa18.6■□□□□ 0.57
LDLRAP1-205ENST00000484476 RTF1Q92541 710 aaKnown RBP18.6■□□□□ 0.57
LDLRAP1-205ENST00000484476 CD2APQ9Y5K6 639 aa18.6■□□□□ 0.57
LDLRAP1-205ENST00000484476 CNTNAP4Q9C0A0 1308 aa18.59■□□□□ 0.57
LDLRAP1-205ENST00000484476 RPS6KA4O75676 772 aa18.59■□□□□ 0.57
LDLRAP1-205ENST00000484476 FCHSD2O94868 740 aa18.59■□□□□ 0.57
LDLRAP1-205ENST00000484476 PRKAR2BP31323 418 aa18.59■□□□□ 0.57
LDLRAP1-205ENST00000484476 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
LDLRAP1-205ENST00000484476 SLC4A9Q96Q91 983 aa18.57■□□□□ 0.56
LDLRAP1-205ENST00000484476 GRIN3BO60391 1043 aa18.56■□□□□ 0.56
LDLRAP1-205ENST00000484476 CRKLP46109 303 aaKnown RBP18.56■□□□□ 0.56
LDLRAP1-205ENST00000484476 SMIM5Q71RC9 77 aa18.56■□□□□ 0.56
LDLRAP1-205ENST00000484476 NPM2Q86SE8 214 aaKnown RBP18.56■□□□□ 0.56
LDLRAP1-205ENST00000484476 ARHGEF1Q92888 912 aaKnown RBP18.56■□□□□ 0.56
LDLRAP1-205ENST00000484476 STARD3NLO95772 234 aa18.55■□□□□ 0.56
LDLRAP1-205ENST00000484476 SLC39A6Q13433 755 aa18.55■□□□□ 0.56
LDLRAP1-205ENST00000484476 VSIG10Q8N0Z9 540 aa18.55■□□□□ 0.56
LDLRAP1-205ENST00000484476 RSPH6AQ9H0K4 717 aa18.55■□□□□ 0.56
LDLRAP1-205ENST00000484476 ZPR1O75312 459 aa18.54■□□□□ 0.56
LDLRAP1-205ENST00000484476 RALBP1Q15311 655 aa18.54■□□□□ 0.56
LDLRAP1-205ENST00000484476 AMIGO3Q86WK7 504 aa18.54■□□□□ 0.56
LDLRAP1-205ENST00000484476 TEX13AQ9BXU3 409 aaPredicted RBP18.54■□□□□ 0.56
LDLRAP1-205ENST00000484476 CCDC87Q9NVE4 849 aa18.54■□□□□ 0.56
LDLRAP1-205ENST00000484476 TAF1LQ8IZX4 1826 aa18.53■□□□□ 0.56
LDLRAP1-205ENST00000484476 COL3A1P02461 1466 aaPredicted RBP18.53■□□□□ 0.56
LDLRAP1-205ENST00000484476 MMP10P09238 476 aa18.53■□□□□ 0.56
LDLRAP1-205ENST00000484476 ZEB1P37275 1124 aaPredicted RBP18.53■□□□□ 0.56
LDLRAP1-205ENST00000484476 DDX10Q13206 875 aaKnown RBP18.53■□□□□ 0.56
LDLRAP1-205ENST00000484476 PHACTR3Q96KR7 559 aa18.53■□□□□ 0.56
LDLRAP1-205ENST00000484476 PARP3Q9Y6F1 533 aa18.53■□□□□ 0.56
LDLRAP1-205ENST00000484476 DNAJC10Q8IXB1 793 aa18.52■□□□□ 0.56
LDLRAP1-205ENST00000484476 IL17REQ8NFR9 667 aa18.52■□□□□ 0.56
LDLRAP1-205ENST00000484476 NLGN2Q8NFZ4 835 aa18.52■□□□□ 0.56
LDLRAP1-205ENST00000484476 TUBGCP6Q96RT7 1819 aa18.51■□□□□ 0.55
LDLRAP1-205ENST00000484476 BTBD11A6QL63 1104 aa18.51■□□□□ 0.55
LDLRAP1-205ENST00000484476 HTATSF1O43719 755 aaKnown RBP18.5■□□□□ 0.55
LDLRAP1-205ENST00000484476 ZNF790Q6PG37 636 aa18.5■□□□□ 0.55
LDLRAP1-205ENST00000484476 FMNL2Q96PY5 1086 aa18.5■□□□□ 0.55
LDLRAP1-205ENST00000484476 MAPK8IP3Q9UPT6 1336 aa18.49■□□□□ 0.55
LDLRAP1-205ENST00000484476 CYP19A1P11511 503 aaPredicted RBP18.49■□□□□ 0.55
LDLRAP1-205ENST00000484476 SCN11AQ9UI33 1791 aa18.48■□□□□ 0.55
LDLRAP1-205ENST00000484476 ZNF831Q5JPB2 1677 aa18.48■□□□□ 0.55
LDLRAP1-205ENST00000484476 INTS5Q6P9B9 1019 aaKnown RBP18.48■□□□□ 0.55
LDLRAP1-205ENST00000484476 A0A087WZG4 1122 aa18.47■□□□□ 0.55
LDLRAP1-205ENST00000484476 GYS1P13807 737 aa18.47■□□□□ 0.55
LDLRAP1-205ENST00000484476 UBR3Q6ZT12 1888 aa18.47■□□□□ 0.55
LDLRAP1-205ENST00000484476 CANXP27824 592 aaKnown RBP18.46■□□□□ 0.55
LDLRAP1-205ENST00000484476 MRC1P22897 1456 aa18.46■□□□□ 0.54
LDLRAP1-205ENST00000484476 TGFB2P61812 414 aa18.45■□□□□ 0.54
LDLRAP1-205ENST00000484476 ZNF496Q96IT1 587 aaPredicted RBP18.45■□□□□ 0.54
LDLRAP1-205ENST00000484476 COL24A1Q17RW2 1714 aa18.45■□□□□ 0.54
LDLRAP1-205ENST00000484476 USP42Q9H9J4 1324 aaKnown RBP18.45■□□□□ 0.54
LDLRAP1-205ENST00000484476 MCM10Q7L590 875 aa18.44■□□□□ 0.54
LDLRAP1-205ENST00000484476 SRP68Q9UHB9 627 aaKnown RBP18.44■□□□□ 0.54
LDLRAP1-205ENST00000484476 ZNF330Q9Y3S2 320 aaPredicted RBP18.44■□□□□ 0.54
LDLRAP1-205ENST00000484476 TAF7Q15545 349 aaPredicted RBP18.43■□□□□ 0.54
LDLRAP1-205ENST00000484476 PNISRQ8TF01 805 aaKnown RBP18.43■□□□□ 0.54
LDLRAP1-205ENST00000484476 NARFQ9UHQ1 456 aa18.43■□□□□ 0.54
LDLRAP1-205ENST00000484476 SOS1Q07889 1333 aaPredicted RBP18.43■□□□□ 0.54
LDLRAP1-205ENST00000484476 CEMIPQ8WUJ3 1361 aa18.42■□□□□ 0.54
LDLRAP1-205ENST00000484476 HEG1Q9ULI3 1381 aa18.42■□□□□ 0.54
LDLRAP1-205ENST00000484476 FKBP8Q14318 412 aa18.42■□□□□ 0.54
LDLRAP1-205ENST00000484476 USPL1Q5W0Q7 1092 aa18.42■□□□□ 0.54
LDLRAP1-205ENST00000484476 ZBTB1Q9Y2K1 713 aa18.42■□□□□ 0.54
LDLRAP1-205ENST00000484476 SNRPA1P09661 255 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms