RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 TAF1LQ8IZX4 1826 aa16.17■□□□□ 0.18
SNRNP200-206ENST00000484372 GNPATO15228 680 aa16.17■□□□□ 0.18
SNRNP200-206ENST00000484372 AEBP1Q8IUX7 1158 aa16.17■□□□□ 0.18
SNRNP200-206ENST00000484372 LINC00116Q8NCU8 138 aa16.17■□□□□ 0.18
SNRNP200-206ENST00000484372 RBM42Q9BTD8 480 aaKnown RBP16.17■□□□□ 0.18
SNRNP200-206ENST00000484372 COL24A1Q17RW2 1714 aa16.16■□□□□ 0.18
SNRNP200-206ENST00000484372 CC2D1BQ5T0F9 858 aaKnown RBP16.16■□□□□ 0.18
SNRNP200-206ENST00000484372 CD2APQ9Y5K6 639 aa16.16■□□□□ 0.18
SNRNP200-206ENST00000484372 KDRP35968 1356 aa16.15■□□□□ 0.18
SNRNP200-206ENST00000484372 UTRNP46939 3433 aa16.15■□□□□ 0.18
SNRNP200-206ENST00000484372 PER1O15534 1290 aaPredicted RBP16.15■□□□□ 0.18
SNRNP200-206ENST00000484372 GRIN3BO60391 1043 aa16.15■□□□□ 0.18
SNRNP200-206ENST00000484372 ITPK1Q13572 414 aa16.15■□□□□ 0.18
SNRNP200-206ENST00000484372 RTCBQ9Y3I0 505 aaKnown RBP16.15■□□□□ 0.18
SNRNP200-206ENST00000484372 DIAPH1O60610 1272 aaKnown RBP16.14■□□□□ 0.17
SNRNP200-206ENST00000484372 NLGN2Q8NFZ4 835 aa16.14■□□□□ 0.17
SNRNP200-206ENST00000484372 AKAP4Q5JQC9 854 aa16.13■□□□□ 0.17
SNRNP200-206ENST00000484372 TRAPPC3LQ5T215 181 aa16.13■□□□□ 0.17
SNRNP200-206ENST00000484372 RC3H1Q5TC82 1133 aaKnown RBP16.12■□□□□ 0.17
SNRNP200-206ENST00000484372 NFATC2IPQ8NCF5 419 aa16.12■□□□□ 0.17
SNRNP200-206ENST00000484372 NPC1L1Q9UHC9 1359 aa16.12■□□□□ 0.17
SNRNP200-206ENST00000484372 KDM6AO15550 1401 aaPredicted RBP16.11■□□□□ 0.17
SNRNP200-206ENST00000484372 HMOX1P09601 288 aa16.11■□□□□ 0.17
SNRNP200-206ENST00000484372 ADRA2BP18089 450 aa16.11■□□□□ 0.17
SNRNP200-206ENST00000484372 ZNF784Q8NCA9 323 aaPredicted RBP16.11■□□□□ 0.17
SNRNP200-206ENST00000484372 CHD4Q14839 1912 aa16.11■□□□□ 0.17
SNRNP200-206ENST00000484372 UBR3Q6ZT12 1888 aa16.1■□□□□ 0.17
SNRNP200-206ENST00000484372 PTCD1O75127 700 aaKnown RBP16.1■□□□□ 0.17
SNRNP200-206ENST00000484372 CNGB1Q14028 1251 aaPredicted RBP16.1■□□□□ 0.17
SNRNP200-206ENST00000484372 AMIGO3Q86WK7 504 aa16.1■□□□□ 0.17
SNRNP200-206ENST00000484372 NLGN1Q8N2Q7 840 aa16.1■□□□□ 0.17
SNRNP200-206ENST00000484372 CNTNAP4Q9C0A0 1308 aa16.1■□□□□ 0.17
SNRNP200-206ENST00000484372 RFC4P35249 363 aa16.09■□□□□ 0.17
SNRNP200-206ENST00000484372 SMIM5Q71RC9 77 aa16.09■□□□□ 0.17
SNRNP200-206ENST00000484372 RPS6KA4O75676 772 aa16.08■□□□□ 0.16
SNRNP200-206ENST00000484372 SLC4A9Q96Q91 983 aa16.08■□□□□ 0.16
SNRNP200-206ENST00000484372 SLC52A2Q9HAB3 445 aa16.08■□□□□ 0.16
SNRNP200-206ENST00000484372 U2SURPO15042 1029 aaKnown RBP16.07■□□□□ 0.16
SNRNP200-206ENST00000484372 ZEB1P37275 1124 aaPredicted RBP16.07■□□□□ 0.16
SNRNP200-206ENST00000484372 CFAP53Q96M91 514 aa16.07■□□□□ 0.16
SNRNP200-206ENST00000484372 ZNF831Q5JPB2 1677 aa16.06■□□□□ 0.16
SNRNP200-206ENST00000484372 RNMTO43148 476 aaKnown RBP16.06■□□□□ 0.16
SNRNP200-206ENST00000484372 MMP10P09238 476 aa16.06■□□□□ 0.16
SNRNP200-206ENST00000484372 ARHGEF1Q92888 912 aaKnown RBP16.06■□□□□ 0.16
SNRNP200-206ENST00000484372 YBX3P16989 372 aaKnown RBP eCLIP16.05■□□□□ 0.162e-11■□□□□ 10.5
SNRNP200-206ENST00000484372 MTHFSDQ2M296 383 aaKnown RBP16.05■□□□□ 0.16
SNRNP200-206ENST00000484372 CRKLP46109 303 aaKnown RBP16.04■□□□□ 0.16
SNRNP200-206ENST00000484372 GAS2L2Q8NHY3 880 aa16.04■□□□□ 0.16
SNRNP200-206ENST00000484372 LGR6Q9HBX8 967 aa16.04■□□□□ 0.16
SNRNP200-206ENST00000484372 NUDCQ9Y266 331 aa16.04■□□□□ 0.16
SNRNP200-206ENST00000484372 GOLGB1Q14789 3259 aaKnown RBP16.04■□□□□ 0.16
SNRNP200-206ENST00000484372 CCDC87Q9NVE4 849 aa16.03■□□□□ 0.16
SNRNP200-206ENST00000484372 PARP3Q9Y6F1 533 aa16.03■□□□□ 0.16
SNRNP200-206ENST00000484372 TTC5Q8N0Z6 440 aa16.02■□□□□ 0.16
SNRNP200-206ENST00000484372 SCN11AQ9UI33 1791 aa16.02■□□□□ 0.15
SNRNP200-206ENST00000484372 GYS1P13807 737 aa16.01■□□□□ 0.15
SNRNP200-206ENST00000484372 TGFB2P61812 414 aa16.01■□□□□ 0.15
SNRNP200-206ENST00000484372 TEFQ10587 303 aa16.01■□□□□ 0.15
SNRNP200-206ENST00000484372 COL5A3P25940 1745 aaPredicted RBP16■□□□□ 0.15
SNRNP200-206ENST00000484372 GNAT3A8MTJ3 354 aa16■□□□□ 0.15
SNRNP200-206ENST00000484372 ZPR1O75312 459 aa16■□□□□ 0.15
SNRNP200-206ENST00000484372 SLC39A6Q13433 755 aa16■□□□□ 0.15
SNRNP200-206ENST00000484372 DNAJC10Q8IXB1 793 aa16■□□□□ 0.15
SNRNP200-206ENST00000484372 VSIG10Q8N0Z9 540 aa15.99■□□□□ 0.15
SNRNP200-206ENST00000484372 USP42Q9H9J4 1324 aaKnown RBP15.98■□□□□ 0.15
SNRNP200-206ENST00000484372 MRC1P22897 1456 aa15.98■□□□□ 0.15
SNRNP200-206ENST00000484372 GIGYF1O75420 1035 aaPredicted RBP15.98■□□□□ 0.15
SNRNP200-206ENST00000484372 WWC3Q9ULE0 1092 aa15.98■□□□□ 0.15
SNRNP200-206ENST00000484372 COL3A1P02461 1466 aaPredicted RBP15.97■□□□□ 0.15
SNRNP200-206ENST00000484372 STARD3NLO95772 234 aa15.97■□□□□ 0.15
SNRNP200-206ENST00000484372 CYP19A1P11511 503 aaPredicted RBP15.97■□□□□ 0.15
SNRNP200-206ENST00000484372 INTS5Q6P9B9 1019 aaKnown RBP15.97■□□□□ 0.15
SNRNP200-206ENST00000484372 MYH14Q7Z406 1995 aaKnown RBP15.96■□□□□ 0.15
SNRNP200-206ENST00000484372 U2AF1L5P0DN76 240 aaPredicted RBP15.96■□□□□ 0.15
SNRNP200-206ENST00000484372 PRKAR2BP31323 418 aa15.96■□□□□ 0.15
SNRNP200-206ENST00000484372 U2AF1Q01081 240 aaKnown RBP eCLIP15.96■□□□□ 0.15
SNRNP200-206ENST00000484372 TEX13AQ9BXU3 409 aaPredicted RBP15.96■□□□□ 0.15
SNRNP200-206ENST00000484372 SRP68Q9UHB9 627 aaKnown RBP15.96■□□□□ 0.15
SNRNP200-206ENST00000484372 CICQ96RK0 1608 aaPredicted RBP15.96■□□□□ 0.15
SNRNP200-206ENST00000484372 PPP2R1AP30153 589 aa15.95■□□□□ 0.14
SNRNP200-206ENST00000484372 C1QTNF8P60827 252 aa15.95■□□□□ 0.14
SNRNP200-206ENST00000484372 NPM2Q86SE8 214 aaKnown RBP15.95■□□□□ 0.14
SNRNP200-206ENST00000484372 BCS1LQ9Y276 419 aa15.95■□□□□ 0.14
SNRNP200-206ENST00000484372 SOS1Q07889 1333 aaPredicted RBP15.94■□□□□ 0.14
SNRNP200-206ENST00000484372 C10orf71Q711Q0 1435 aa15.94■□□□□ 0.14
SNRNP200-206ENST00000484372 A0A0G2JLW4 131 aa15.94■□□□□ 0.14
SNRNP200-206ENST00000484372 NEFMP07197 916 aa15.94■□□□□ 0.14
SNRNP200-206ENST00000484372 FKBP8Q14318 412 aa15.94■□□□□ 0.14
SNRNP200-206ENST00000484372 RTF1Q92541 710 aaKnown RBP15.94■□□□□ 0.14
SNRNP200-206ENST00000484372 TJP1Q07157 1748 aa15.94■□□□□ 0.14
SNRNP200-206ENST00000484372 PXDNLA1KZ92 1463 aa15.93■□□□□ 0.14
SNRNP200-206ENST00000484372 A0A087WZG4 1122 aa15.93■□□□□ 0.14
SNRNP200-206ENST00000484372 FCHSD2O94868 740 aa15.93■□□□□ 0.14
SNRNP200-206ENST00000484372 USPL1Q5W0Q7 1092 aa15.93■□□□□ 0.14
SNRNP200-206ENST00000484372 ZNF790Q6PG37 636 aa15.93■□□□□ 0.14
SNRNP200-206ENST00000484372 IL17REQ8NFR9 667 aa15.93■□□□□ 0.14
SNRNP200-206ENST00000484372 RSPH6AQ9H0K4 717 aa15.93■□□□□ 0.14
SNRNP200-206ENST00000484372 GPBP1L1Q9HC44 474 aaPredicted RBP15.93■□□□□ 0.14
SNRNP200-206ENST00000484372 NARFQ9UHQ1 456 aa15.93■□□□□ 0.14
SNRNP200-206ENST00000484372 C4AP0C0L4 1744 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms