RNA–Protein interactions for RNA: ENST00000484081.1

CUL3-210, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-210ENST00000484081 SFI1A8K8P3 1242 aa10.13□□□□□ -0.79
CUL3-210ENST00000484081 UPP2O95045 317 aa10.13□□□□□ -0.79
CUL3-210ENST00000484081 SEC13P55735 322 aa10.13□□□□□ -0.79
CUL3-210ENST00000484081 FAM69CQ0P6D2 419 aa10.13□□□□□ -0.79
CUL3-210ENST00000484081 ZFP42Q96MM3 310 aa10.13□□□□□ -0.79
CUL3-210ENST00000484081 PURBQ96QR8 312 aaKnown RBP10.13□□□□□ -0.79
CUL3-210ENST00000484081 INSM2Q96T92 566 aaPredicted RBP10.13□□□□□ -0.79
CUL3-210ENST00000484081 ACIN1Q9UKV3 1341 aaKnown RBP10.12□□□□□ -0.79
CUL3-210ENST00000484081 BMP2P12643 396 aa10.12□□□□□ -0.79
CUL3-210ENST00000484081 EPHA4P54764 986 aa10.12□□□□□ -0.79
CUL3-210ENST00000484081 C6orf118Q5T5N4 469 aa10.12□□□□□ -0.79
CUL3-210ENST00000484081 TMEM164Q5U3C3 297 aa10.12□□□□□ -0.79
CUL3-210ENST00000484081 FOXD4L5Q5VV16 416 aaPredicted RBP10.12□□□□□ -0.79
CUL3-210ENST00000484081 FHDC1Q9C0D6 1143 aaPredicted RBP10.12□□□□□ -0.79
CUL3-210ENST00000484081 TMEM88BA6NKF7 163 aa10.11□□□□□ -0.79
CUL3-210ENST00000484081 CTSOP43234 321 aaPredicted RBP10.11□□□□□ -0.79
CUL3-210ENST00000484081 RNF144AP50876 292 aaPredicted RBP10.11□□□□□ -0.79
CUL3-210ENST00000484081 SCARF1Q14162 830 aa10.11□□□□□ -0.79
CUL3-210ENST00000484081 MTFR1Q15390 333 aa10.11□□□□□ -0.79
CUL3-210ENST00000484081 FAM200AQ8TCP9 573 aa10.11□□□□□ -0.79
CUL3-210ENST00000484081 SOS2Q07890 1332 aaPredicted RBP10.1□□□□□ -0.79
CUL3-210ENST00000484081 MEN1O00255 615 aa10.1□□□□□ -0.79
CUL3-210ENST00000484081 GPC1P35052 558 aa10.1□□□□□ -0.79
CUL3-210ENST00000484081 RETREG2Q8NC44 543 aa10.1□□□□□ -0.79
CUL3-210ENST00000484081 BACH1O14867 736 aa10.09□□□□□ -0.79
CUL3-210ENST00000484081 CENPCQ03188 943 aa10.09□□□□□ -0.79
CUL3-210ENST00000484081 TSEN2Q8NCE0 465 aaKnown RBP10.09□□□□□ -0.79
CUL3-210ENST00000484081 GRIP2Q9C0E4 1043 aa10.09□□□□□ -0.79
CUL3-210ENST00000484081 SERTAD1Q9UHV2 236 aa10.09□□□□□ -0.79
CUL3-210ENST00000484081 SMTNP53814 917 aa10.08□□□□□ -0.8
CUL3-210ENST00000484081 RNF217Q8TC41 542 aa10.08□□□□□ -0.8
CUL3-210ENST00000484081 NLRP3Q96P20 1036 aa10.08□□□□□ -0.8
CUL3-210ENST00000484081 IQSEC3Q9UPP2 1182 aaPredicted RBP10.08□□□□□ -0.8
CUL3-210ENST00000484081 A6NJY4 79 aa10.07□□□□□ -0.8
CUL3-210ENST00000484081 FOXK2Q01167 660 aa10.07□□□□□ -0.8
CUL3-210ENST00000484081 SWI5Q1ZZU3 235 aa10.07□□□□□ -0.8
CUL3-210ENST00000484081 ZNF295-AS1Q8N0V1 137 aa10.07□□□□□ -0.8
CUL3-210ENST00000484081 POLMQ9NP87 494 aaPredicted RBP10.07□□□□□ -0.8
CUL3-210ENST00000484081 SLAIN2Q9P270 581 aa10.07□□□□□ -0.8
CUL3-210ENST00000484081 USTQ9Y2C2 406 aa10.07□□□□□ -0.8
CUL3-210ENST00000484081 RBM19Q9Y4C8 960 aaKnown RBP10.07□□□□□ -0.8
CUL3-210ENST00000484081 TTLL8A6PVC2 850 aa10.06□□□□□ -0.8
CUL3-210ENST00000484081 CSB-PGBD3P0DP91 1061 aa10.06□□□□□ -0.8
CUL3-210ENST00000484081 TLR1Q15399 786 aa10.06□□□□□ -0.8
CUL3-210ENST00000484081 TNS4Q8IZW8 715 aa10.06□□□□□ -0.8
CUL3-210ENST00000484081 SCHIP1Q9P0W5 487 aaPredicted RBP10.06□□□□□ -0.8
CUL3-210ENST00000484081 USP3Q9Y6I4 520 aa10.06□□□□□ -0.8
CUL3-210ENST00000484081 TRIM47Q96LD4 638 aa10.05□□□□□ -0.8
CUL3-210ENST00000484081 GMPR2Q9P2T1 348 aaKnown RBP10.05□□□□□ -0.8
CUL3-210ENST00000484081 CARNS1A5YM72 827 aa10.04□□□□□ -0.8
CUL3-210ENST00000484081 CDK2AP1O14519 115 aa10.04□□□□□ -0.8
CUL3-210ENST00000484081 PPARGC1BQ86YN6 1023 aaKnown RBP10.04□□□□□ -0.8
CUL3-210ENST00000484081 CLP1Q92989 425 aaKnown RBP10.04□□□□□ -0.8
CUL3-210ENST00000484081 DNMT3LQ9UJW3 386 aa10.04□□□□□ -0.8
CUL3-210ENST00000484081 SPATA31C2B4DYI2 1134 aa10.03□□□□□ -0.8
CUL3-210ENST00000484081 C21orf2O43822 256 aa10.03□□□□□ -0.8
CUL3-210ENST00000484081 ZSCAN10Q96SZ4 725 aaPredicted RBP10.03□□□□□ -0.8
CUL3-210ENST00000484081 SENP2Q9HC62 589 aa10.03□□□□□ -0.8
CUL3-210ENST00000484081 WEE1P30291 646 aa10.02□□□□□ -0.81
CUL3-210ENST00000484081 OCLNQ16625 522 aa10.02□□□□□ -0.81
CUL3-210ENST00000484081 KIFC2Q96AC6 838 aa10.02□□□□□ -0.81
CUL3-210ENST00000484081 TSPAN10Q9H1Z9 355 aaPredicted RBP10.02□□□□□ -0.81
CUL3-210ENST00000484081 LGR5O75473 907 aa10.01□□□□□ -0.81
CUL3-210ENST00000484081 SLC27A3Q5K4L6 730 aa10.01□□□□□ -0.81
CUL3-210ENST00000484081 POTEAQ6S8J7 498 aa10.01□□□□□ -0.81
CUL3-210ENST00000484081 LYSMD3Q7Z3D4 306 aa10.01□□□□□ -0.81
CUL3-210ENST00000484081 SLC9A9Q8IVB4 645 aa10.01□□□□□ -0.81
CUL3-210ENST00000484081 HINFPQ9BQA5 517 aa10.01□□□□□ -0.81
CUL3-210ENST00000484081 POTECB2RU33 542 aa10□□□□□ -0.81
CUL3-210ENST00000484081 RHBDD1Q8TEB9 315 aa10□□□□□ -0.81
CUL3-210ENST00000484081 FIGNL2A6NMB9 653 aa9.99□□□□□ -0.81
CUL3-210ENST00000484081 SNRPBP14678 240 aaKnown RBP9.99□□□□□ -0.81
CUL3-210ENST00000484081 IGFBP4P22692 258 aa9.99□□□□□ -0.81
CUL3-210ENST00000484081 PRICKLE2Q7Z3G6 844 aa9.99□□□□□ -0.81
CUL3-210ENST00000484081 SOBPA7XYQ1 873 aa9.98□□□□□ -0.81
CUL3-210ENST00000484081 C4orf17Q53FE4 359 aa9.98□□□□□ -0.81
CUL3-210ENST00000484081 WDR44Q5JSH3 913 aa9.98□□□□□ -0.81
CUL3-210ENST00000484081 TBCELQ5QJ74 424 aa9.98□□□□□ -0.81
CUL3-210ENST00000484081 TMEM214Q6NUQ4 689 aaKnown RBP9.98□□□□□ -0.81
CUL3-210ENST00000484081 NBPF15Q8N660 670 aa9.98□□□□□ -0.81
CUL3-210ENST00000484081 GAS2L2Q8NHY3 880 aa9.98□□□□□ -0.81
CUL3-210ENST00000484081 ZDHHC1Q8WTX9 485 aa9.98□□□□□ -0.81
CUL3-210ENST00000484081 ATAD2Q6PL18 1390 aa9.98□□□□□ -0.81
CUL3-210ENST00000484081 PRMT3O60678 531 aa9.97□□□□□ -0.81
CUL3-210ENST00000484081 POU4F2Q12837 409 aa9.97□□□□□ -0.81
CUL3-210ENST00000484081 TEAD4Q15561 434 aa9.97□□□□□ -0.81
CUL3-210ENST00000484081 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.97□□□□□ -0.81
CUL3-210ENST00000484081 NBPF10Q6P3W6 841 aaKnown RBP9.97□□□□□ -0.81
CUL3-210ENST00000484081 STAG2Q8N3U4 1231 aa9.97□□□□□ -0.81
CUL3-210ENST00000484081 SCG3Q8WXD2 468 aaKnown RBP9.97□□□□□ -0.81
CUL3-210ENST00000484081 CXXC1Q9P0U4 656 aaPredicted RBP9.97□□□□□ -0.81
CUL3-210ENST00000484081 MAN1A2O60476 641 aa9.96□□□□□ -0.82
CUL3-210ENST00000484081 SSFA2P28290 1259 aa9.96□□□□□ -0.82
CUL3-210ENST00000484081 PSMA6P60900 246 aaKnown RBP9.96□□□□□ -0.82
CUL3-210ENST00000484081 PDE4CQ08493 712 aa9.96□□□□□ -0.82
CUL3-210ENST00000484081 PHLDB3Q6NSJ2 640 aa9.96□□□□□ -0.82
CUL3-210ENST00000484081 TAS1R3Q7RTX0 852 aa9.96□□□□□ -0.82
CUL3-210ENST00000484081 PRIMPOLQ96LW4 560 aa9.96□□□□□ -0.82
CUL3-210ENST00000484081 TRAIPQ9BWF2 469 aa9.96□□□□□ -0.82
CUL3-210ENST00000484081 NIFKQ9BYG3 293 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms