RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 NUTM2AQ8IVF1 878 aaPredicted RBP9.26□□□□□ -0.93
SEMA3D-204ENST00000484038 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.26□□□□□ -0.93
SEMA3D-204ENST00000484038 IL27Q8NEV9 243 aa9.26□□□□□ -0.93
SEMA3D-204ENST00000484038 THAP11Q96EK4 314 aa9.26□□□□□ -0.93
SEMA3D-204ENST00000484038 POLR3EQ9NVU0 708 aa9.26□□□□□ -0.93
SEMA3D-204ENST00000484038 ADAMTS13Q76LX8 1427 aa9.25□□□□□ -0.93
SEMA3D-204ENST00000484038 E9PCH4 1651 aa9.25□□□□□ -0.93
SEMA3D-204ENST00000484038 UNC13BO14795 1591 aa9.25□□□□□ -0.93
SEMA3D-204ENST00000484038 TRPM2O94759 1503 aa9.25□□□□□ -0.93
SEMA3D-204ENST00000484038 USB1Q9BQ65 265 aaKnown RBP9.25□□□□□ -0.93
SEMA3D-204ENST00000484038 C19orf44Q9H6X5 657 aa9.25□□□□□ -0.93
SEMA3D-204ENST00000484038 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.25□□□□□ -0.93
SEMA3D-204ENST00000484038 PCDHGC3Q9UN70 934 aa9.25□□□□□ -0.93
SEMA3D-204ENST00000484038 SALL2Q9Y467 1007 aaPredicted RBP9.25□□□□□ -0.93
SEMA3D-204ENST00000484038 RXRBP28702 533 aa9.24□□□□□ -0.93
SEMA3D-204ENST00000484038 CLK2P49760 499 aaKnown RBP9.24□□□□□ -0.93
SEMA3D-204ENST00000484038 PRDM9Q9NQV7 894 aa9.24□□□□□ -0.93
SEMA3D-204ENST00000484038 ASXL1Q8IXJ9 1541 aa9.23□□□□□ -0.93
SEMA3D-204ENST00000484038 PIK3R4Q99570 1358 aa9.23□□□□□ -0.93
SEMA3D-204ENST00000484038 BRINP3Q76B58 766 aa9.23□□□□□ -0.93
SEMA3D-204ENST00000484038 PLEKHG3A1L390 1219 aa9.22□□□□□ -0.93
SEMA3D-204ENST00000484038 SPTLC1O15269 473 aa9.22□□□□□ -0.93
SEMA3D-204ENST00000484038 MTMR2Q13614 643 aa9.22□□□□□ -0.93
SEMA3D-204ENST00000484038 AMOTL2Q9Y2J4 779 aa9.22□□□□□ -0.93
SEMA3D-204ENST00000484038 IQGAP3Q86VI3 1631 aa9.22□□□□□ -0.93
SEMA3D-204ENST00000484038 PTPRUQ92729 1446 aa9.22□□□□□ -0.93
SEMA3D-204ENST00000484038 PPEF1O14829 653 aaPredicted RBP9.21□□□□□ -0.93
SEMA3D-204ENST00000484038 LIMD1Q9UGP4 676 aa9.21□□□□□ -0.93
SEMA3D-204ENST00000484038 PCDHB15Q9Y5E8 787 aa9.21□□□□□ -0.93
SEMA3D-204ENST00000484038 AFF2P51816 1311 aa9.21□□□□□ -0.93
SEMA3D-204ENST00000484038 DCCP43146 1447 aa9.21□□□□□ -0.94
SEMA3D-204ENST00000484038 XRN1Q8IZH2 1706 aaKnown RBP9.21□□□□□ -0.94
SEMA3D-204ENST00000484038 CDK12Q9NYV4 1490 aaPredicted RBP9.21□□□□□ -0.94
SEMA3D-204ENST00000484038 MSS51Q4VC12 460 aa9.21□□□□□ -0.94
SEMA3D-204ENST00000484038 RETREG3Q86VR2 466 aa9.21□□□□□ -0.94
SEMA3D-204ENST00000484038 FAM160A2Q8N612 972 aaPredicted RBP9.21□□□□□ -0.94
SEMA3D-204ENST00000484038 ZBTB3Q9H5J0 574 aa9.21□□□□□ -0.94
SEMA3D-204ENST00000484038 NHSL1Q5SYE7 1610 aa9.2□□□□□ -0.94
SEMA3D-204ENST00000484038 NRXN3Q9Y4C0 1643 aa9.2□□□□□ -0.94
SEMA3D-204ENST00000484038 RNF223E7ERA6 249 aa9.2□□□□□ -0.94
SEMA3D-204ENST00000484038 GJA5P36382 358 aa9.2□□□□□ -0.94
SEMA3D-204ENST00000484038 SH3D19Q5HYK7 790 aa9.2□□□□□ -0.94
SEMA3D-204ENST00000484038 TSC1Q92574 1164 aa9.2□□□□□ -0.94
SEMA3D-204ENST00000484038 C8orf37Q96NL8 207 aa9.2□□□□□ -0.94
SEMA3D-204ENST00000484038 MST1RQ04912 1400 aa9.19□□□□□ -0.94
SEMA3D-204ENST00000484038 SETD5Q9C0A6 1442 aa9.19□□□□□ -0.94
SEMA3D-204ENST00000484038 CABLES1Q8TDN4 633 aa9.19□□□□□ -0.94
SEMA3D-204ENST00000484038 RGS12O14924 1447 aa9.19□□□□□ -0.94
SEMA3D-204ENST00000484038 SETBP1Q9Y6X0 1596 aa9.18□□□□□ -0.94
SEMA3D-204ENST00000484038 HRCP23327 699 aa9.18□□□□□ -0.94
SEMA3D-204ENST00000484038 SKIV2LQ15477 1246 aaKnown RBP9.18□□□□□ -0.94
SEMA3D-204ENST00000484038 DDX17Q92841 729 aaKnown RBP9.18□□□□□ -0.94
SEMA3D-204ENST00000484038 FCF1Q9Y324 198 aaKnown RBP9.18□□□□□ -0.94
SEMA3D-204ENST00000484038 NUP155O75694 1391 aa9.18□□□□□ -0.94
SEMA3D-204ENST00000484038 QPCTQ16769 361 aa9.17□□□□□ -0.94
SEMA3D-204ENST00000484038 ZNF326Q5BKZ1 582 aaKnown RBP9.17□□□□□ -0.94
SEMA3D-204ENST00000484038 PRR7Q8TB68 274 aa9.17□□□□□ -0.94
SEMA3D-204ENST00000484038 LRRC59Q96AG4 307 aaKnown RBP9.17□□□□□ -0.94
SEMA3D-204ENST00000484038 SPHKAPQ2M3C7 1700 aa9.17□□□□□ -0.94
SEMA3D-204ENST00000484038 NALCNQ8IZF0 1738 aa9.17□□□□□ -0.94
SEMA3D-204ENST00000484038 ADGRL3Q9HAR2 1447 aa9.16□□□□□ -0.94
SEMA3D-204ENST00000484038 METP08581 1390 aa9.16□□□□□ -0.94
SEMA3D-204ENST00000484038 PNPLA6Q8IY17 1366 aa9.16□□□□□ -0.94
SEMA3D-204ENST00000484038 SPDYE5A6NIY4 337 aa9.16□□□□□ -0.94
SEMA3D-204ENST00000484038 PRPF38BQ5VTL8 546 aaKnown RBP9.16□□□□□ -0.94
SEMA3D-204ENST00000484038 CCDC24Q8N4L8 307 aa9.16□□□□□ -0.94
SEMA3D-204ENST00000484038 ANKLE1Q8NAG6 615 aa9.16□□□□□ -0.94
SEMA3D-204ENST00000484038 PCMTD1Q96MG8 357 aaPredicted RBP9.16□□□□□ -0.94
SEMA3D-204ENST00000484038 QTRT2Q9H974 415 aaKnown RBP9.16□□□□□ -0.94
SEMA3D-204ENST00000484038 SRCAPQ6ZRS2 3230 aa9.16□□□□□ -0.94
SEMA3D-204ENST00000484038 ROCK1Q13464 1354 aa9.16□□□□□ -0.94
SEMA3D-204ENST00000484038 ADAMTS2O95450 1211 aa9.15□□□□□ -0.94
SEMA3D-204ENST00000484038 JUNDP17535 347 aa9.15□□□□□ -0.94
SEMA3D-204ENST00000484038 ITGAEP38570 1179 aa9.15□□□□□ -0.94
SEMA3D-204ENST00000484038 RBM6P78332 1123 aaKnown RBP9.15□□□□□ -0.94
SEMA3D-204ENST00000484038 PROCA1Q8NCQ7 364 aaPredicted RBP9.15□□□□□ -0.95
SEMA3D-204ENST00000484038 PRKD2Q9BZL6 878 aa9.15□□□□□ -0.95
SEMA3D-204ENST00000484038 NGLY1Q96IV0 654 aa9.14□□□□□ -0.95
SEMA3D-204ENST00000484038 DXOO77932 396 aaKnown RBP9.13□□□□□ -0.95
SEMA3D-204ENST00000484038 MMP16P51512 607 aa9.13□□□□□ -0.95
SEMA3D-204ENST00000484038 TUSC1Q2TAM9 212 aa9.13□□□□□ -0.95
SEMA3D-204ENST00000484038 NEXMIFQ5QGS0 1516 aa9.13□□□□□ -0.95
SEMA3D-204ENST00000484038 C1orf167Q5SNV9 1468 aa9.13□□□□□ -0.95
SEMA3D-204ENST00000484038 CLTCL1P53675 1640 aa9.12□□□□□ -0.95
SEMA3D-204ENST00000484038 ATAD2Q6PL18 1390 aa9.12□□□□□ -0.95
SEMA3D-204ENST00000484038 CFAP99D6REC4 459 aa9.12□□□□□ -0.95
SEMA3D-204ENST00000484038 LILRB3O75022 631 aa9.12□□□□□ -0.95
SEMA3D-204ENST00000484038 ZBTB24O43167 697 aaPredicted RBP9.11□□□□□ -0.95
SEMA3D-204ENST00000484038 RGS20O76081 388 aa9.11□□□□□ -0.95
SEMA3D-204ENST00000484038 HELBQ8NG08 1087 aaPredicted RBP9.11□□□□□ -0.95
SEMA3D-204ENST00000484038 NUDT12Q9BQG2 462 aa9.11□□□□□ -0.95
SEMA3D-204ENST00000484038 USP21Q9UK80 565 aa9.11□□□□□ -0.95
SEMA3D-204ENST00000484038 EP400Q96L91 3159 aa9.11□□□□□ -0.95
SEMA3D-204ENST00000484038 RTL5Q5HYW3 569 aaPredicted RBP9.1□□□□□ -0.95
SEMA3D-204ENST00000484038 LAMC1P11047 1609 aa9.1□□□□□ -0.95
SEMA3D-204ENST00000484038 SLC19A1P41440 591 aa9.1□□□□□ -0.95
SEMA3D-204ENST00000484038 PTCH1Q13635 1447 aa9.1□□□□□ -0.95
SEMA3D-204ENST00000484038 PLA2G2CQ5R387 149 aa9.1□□□□□ -0.95
SEMA3D-204ENST00000484038 ORAI2Q96SN7 254 aa9.1□□□□□ -0.95
SEMA3D-204ENST00000484038 GOPCQ9HD26 462 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms