RNA–Protein interactions for RNA: ENST00000484031.5

TRO-222, Transcript of trophinin, human

TSL 5

Gene TRO, Length 650 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-222	ENST00000484031	FBLN1	P23142	703 aa		18.55	■□□□□ 0.56
TRO-222	ENST00000484031	SIK1	P57059	783 aa		18.55	■□□□□ 0.56
TRO-222	ENST00000484031	PIGB	Q92521	554 aa		18.55	■□□□□ 0.56
TRO-222	ENST00000484031	SIN3A	Q96ST3	1273 aa		18.55	■□□□□ 0.56
TRO-222	ENST00000484031	RNF181	Q9P0P0	153 aa		18.55	■□□□□ 0.56
TRO-222	ENST00000484031	DCAF5	Q96JK2	942 aa		18.54	■□□□□ 0.56
TRO-222	ENST00000484031	ITPK1	Q13572	414 aa		18.53	■□□□□ 0.56
TRO-222	ENST00000484031	NLGN1	Q8N2Q7	840 aa		18.53	■□□□□ 0.56
TRO-222	ENST00000484031	PCGF6	Q9BYE7	350 aa		18.53	■□□□□ 0.56
TRO-222	ENST00000484031	CCDC87	Q9NVE4	849 aa		18.53	■□□□□ 0.56
TRO-222	ENST00000484031	RTL1	A6NKG5	1358 aa		18.53	■□□□□ 0.56
TRO-222	ENST00000484031	ROCK2	O75116	1388 aa	Known RBP	18.53	■□□□□ 0.56
TRO-222	ENST00000484031	TERF2IP	Q9NYB0	399 aa		18.52	■□□□□ 0.56
TRO-222	ENST00000484031	TMF1	P82094	1093 aa		18.51	■□□□□ 0.55
TRO-222	ENST00000484031	NEUROD1	Q13562	356 aa		18.51	■□□□□ 0.55
TRO-222	ENST00000484031	L3MBTL2	Q969R5	705 aa		18.51	■□□□□ 0.55
TRO-222	ENST00000484031	COG3	Q96JB2	828 aa		18.51	■□□□□ 0.55
TRO-222	ENST00000484031	C4A	P0C0L4	1744 aa		18.51	■□□□□ 0.55
TRO-222	ENST00000484031	SBF1	O95248	1867 aa		18.5	■□□□□ 0.55
TRO-222	ENST00000484031	PIM2	Q9P1W9	311 aa		18.5	■□□□□ 0.55
TRO-222	ENST00000484031	ATP6V1A	P38606	617 aa		18.48	■□□□□ 0.55
TRO-222	ENST00000484031	NKX1-1	Q15270	411 aa	Predicted RBP	18.48	■□□□□ 0.55
TRO-222	ENST00000484031	DALRD3	Q5D0E6	543 aa	Known RBP	18.48	■□□□□ 0.55
TRO-222	ENST00000484031	TRAPPC3L	Q5T215	181 aa		18.48	■□□□□ 0.55
TRO-222	ENST00000484031	ZC3H4	Q9UPT8	1303 aa	Known RBP	18.48	■□□□□ 0.55
TRO-222	ENST00000484031	GYS1	P13807	737 aa		18.47	■□□□□ 0.55
TRO-222	ENST00000484031	VEGFA	P15692	232 aa	Predicted RBP	18.47	■□□□□ 0.55
TRO-222	ENST00000484031	SMG6	Q86US8	1419 aa	Known RBP	18.47	■□□□□ 0.55
TRO-222	ENST00000484031	RRS1	Q15050	365 aa	Known RBP	18.46	■□□□□ 0.55
TRO-222	ENST00000484031	PRDM10	Q9NQV6	1147 aa		18.46	■□□□□ 0.55
TRO-222	ENST00000484031	ASAP1	Q9ULH1	1129 aa		18.46	■□□□□ 0.55
TRO-222	ENST00000484031	RTCB	Q9Y3I0	505 aa	Known RBP	18.46	■□□□□ 0.55
TRO-222	ENST00000484031	PARP3	Q9Y6F1	533 aa		18.46	■□□□□ 0.55
TRO-222	ENST00000484031	FOXN1	O15353	648 aa		18.45	■□□□□ 0.54
TRO-222	ENST00000484031	ARHGEF1	Q92888	912 aa	Known RBP	18.45	■□□□□ 0.54
TRO-222	ENST00000484031	KDM6A	O15550	1401 aa	Predicted RBP	18.44	■□□□□ 0.54
TRO-222	ENST00000484031	GLTPD2	A6NH11	291 aa		18.44	■□□□□ 0.54
TRO-222	ENST00000484031	ADRA2B	P18089	450 aa		18.43	■□□□□ 0.54
TRO-222	ENST00000484031	PUS7	Q96PZ0	661 aa	Known RBP	18.43	■□□□□ 0.54
TRO-222	ENST00000484031	FAM161A	Q3B820	660 aa		18.42	■□□□□ 0.54
TRO-222	ENST00000484031	TMOD3	Q9NYL9	352 aa		18.42	■□□□□ 0.54
TRO-222	ENST00000484031	INSR	P06213	1382 aa		18.42	■□□□□ 0.54
TRO-222	ENST00000484031	KDR	P35968	1356 aa		18.42	■□□□□ 0.54
TRO-222	ENST00000484031	HSP90AB2P	Q58FF8	381 aa		18.41	■□□□□ 0.54
TRO-222	ENST00000484031	ATG3	Q9NT62	314 aa		18.41	■□□□□ 0.54
TRO-222	ENST00000484031	RFC4	P35249	363 aa		18.4	■□□□□ 0.54
TRO-222	ENST00000484031	RASSF7	Q02833	373 aa		18.4	■□□□□ 0.54
TRO-222	ENST00000484031	RC3H1	Q5TC82	1133 aa	Known RBP	18.4	■□□□□ 0.54
TRO-222	ENST00000484031	CREBZF	Q9NS37	354 aa		18.4	■□□□□ 0.54
TRO-222	ENST00000484031	MKRN1	Q9UHC7	482 aa	Known RBP	18.4	■□□□□ 0.54
TRO-222	ENST00000484031	POTEC	B2RU33	542 aa		18.39	■□□□□ 0.53
TRO-222	ENST00000484031	CHRNA5	P30532	468 aa		18.39	■□□□□ 0.53
TRO-222	ENST00000484031	SLC4A9	Q96Q91	983 aa		18.39	■□□□□ 0.53
TRO-222	ENST00000484031	RPS6KA4	O75676	772 aa		18.38	■□□□□ 0.53
TRO-222	ENST00000484031	LMNB1	P20700	586 aa		18.38	■□□□□ 0.53
TRO-222	ENST00000484031	TONSL	Q96HA7	1378 aa		18.38	■□□□□ 0.53
TRO-222	ENST00000484031	CTCF	P49711	727 aa	Predicted RBP	18.37	■□□□□ 0.53
TRO-222	ENST00000484031	SPG7	Q9UQ90	795 aa		18.37	■□□□□ 0.53
TRO-222	ENST00000484031	CNTNAP4	Q9C0A0	1308 aa		18.37	■□□□□ 0.53
TRO-222	ENST00000484031	NCAPD2	Q15021	1401 aa		18.37	■□□□□ 0.53
TRO-222	ENST00000484031	ZNF831	Q5JPB2	1677 aa		18.37	■□□□□ 0.53
TRO-222	ENST00000484031	FLT4	P35916	1363 aa		18.36	■□□□□ 0.53
TRO-222	ENST00000484031	DDR1	Q08345	913 aa		18.36	■□□□□ 0.53
TRO-222	ENST00000484031	COL5A3	P25940	1745 aa	Predicted RBP	18.35	■□□□□ 0.53
TRO-222	ENST00000484031	KIF24	Q5T7B8	1368 aa		18.35	■□□□□ 0.53
TRO-222	ENST00000484031	ABHD8	Q96I13	439 aa		18.35	■□□□□ 0.53
TRO-222	ENST00000484031	CNTNAP1	P78357	1384 aa		18.34	■□□□□ 0.53
TRO-222	ENST00000484031	FYB1	O15117	783 aa		18.34	■□□□□ 0.53
TRO-222	ENST00000484031	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	18.34	■□□□□ 0.53	2e-6	■■■■■ 28.2
TRO-222	ENST00000484031	MYH14	Q7Z406	1995 aa	Known RBP	18.33	■□□□□ 0.53
TRO-222	ENST00000484031	FKBP8	Q14318	412 aa		18.33	■□□□□ 0.52
TRO-222	ENST00000484031	GGNBP2	Q9H3C7	697 aa		18.33	■□□□□ 0.52
TRO-222	ENST00000484031	TIAM2	Q8IVF5	1701 aa		18.32	■□□□□ 0.52
TRO-222	ENST00000484031	PHKG2	P15735	406 aa		18.32	■□□□□ 0.52
TRO-222	ENST00000484031	AIDA	Q96BJ3	306 aa		18.32	■□□□□ 0.52
TRO-222	ENST00000484031	CARD11	Q9BXL7	1154 aa		18.32	■□□□□ 0.52
TRO-222	ENST00000484031	SRP68	Q9UHB9	627 aa	Known RBP	18.32	■□□□□ 0.52
TRO-222	ENST00000484031	LBX1	P52954	281 aa		18.31	■□□□□ 0.52
TRO-222	ENST00000484031	CHADL	Q6NUI6	762 aa		18.31	■□□□□ 0.52
TRO-222	ENST00000484031	IFNL2	Q8IZJ0	200 aa		18.31	■□□□□ 0.52
TRO-222	ENST00000484031	RBM42	Q9BTD8	480 aa	Known RBP	18.31	■□□□□ 0.52
TRO-222	ENST00000484031	WBP1L	Q9NX94	342 aa		18.31	■□□□□ 0.52
TRO-222	ENST00000484031	USP42	Q9H9J4	1324 aa	Known RBP	18.3	■□□□□ 0.52
TRO-222	ENST00000484031	POLRMT	O00411	1230 aa	Known RBP	18.3	■□□□□ 0.52
TRO-222	ENST00000484031	RGS19	P49795	217 aa		18.3	■□□□□ 0.52
TRO-222	ENST00000484031	CCDC88A	Q3V6T2	1871 aa		18.29	■□□□□ 0.52
TRO-222	ENST00000484031	TM4SF1	P30408	202 aa		18.29	■□□□□ 0.52
TRO-222	ENST00000484031	MLLT1	Q03111	559 aa	Predicted RBP	18.29	■□□□□ 0.52
TRO-222	ENST00000484031	VEGFB	P49765	207 aa		18.28	■□□□□ 0.52
TRO-222	ENST00000484031	DPY19L2	Q6NUT2	758 aa		18.28	■□□□□ 0.52
TRO-222	ENST00000484031	NFKBIE	O00221	500 aa		18.27	■□□□□ 0.52
TRO-222	ENST00000484031	POTEI	P0CG38	1075 aa		18.27	■□□□□ 0.52
TRO-222	ENST00000484031	POTEJ	P0CG39	1038 aa		18.27	■□□□□ 0.52
TRO-222	ENST00000484031	PASK	Q96RG2	1323 aa		18.26	■□□□□ 0.51
TRO-222	ENST00000484031	VIRMA	Q69YN4	1812 aa	Known RBP	18.26	■□□□□ 0.51
TRO-222	ENST00000484031	ERVV-2	B6SEH9	535 aa		18.25	■□□□□ 0.51
TRO-222	ENST00000484031	HSPA8	P11142	646 aa	Known RBP	18.25	■□□□□ 0.51
TRO-222	ENST00000484031	TESK2	Q96S53	571 aa		18.25	■□□□□ 0.51
TRO-222	ENST00000484031	EMILIN1	Q9Y6C2	1016 aa		18.25	■□□□□ 0.51
TRO-222	ENST00000484031	DLEC1	Q9Y238	1755 aa		18.25	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms