RNA–Protein interactions for RNA: ENST00000483645.5

MSL3-216, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-216ENST00000483645 TIMMDC1Q9NPL8 285 aa8.49□□□□□ -1.05
MSL3-216ENST00000483645 TFIP11Q9UBB9 837 aaKnown RBP8.49□□□□□ -1.05
MSL3-216ENST00000483645 SERTAD1Q9UHV2 236 aa8.49□□□□□ -1.05
MSL3-216ENST00000483645 DYRK1BQ9Y463 629 aa8.49□□□□□ -1.05
MSL3-216ENST00000483645 PCDHGA11Q9Y5H2 935 aa8.49□□□□□ -1.05
MSL3-216ENST00000483645 STAU1O95793 577 aaKnown RBP8.48□□□□□ -1.05
MSL3-216ENST00000483645 VSIG8P0DPA2 414 aa8.48□□□□□ -1.05
MSL3-216ENST00000483645 RIPOR1Q6ZS17 1223 aa8.48□□□□□ -1.05
MSL3-216ENST00000483645 GAS2L1Q99501 681 aaPredicted RBP8.48□□□□□ -1.05
MSL3-216ENST00000483645 MKRN1Q9UHC7 482 aaKnown RBP8.48□□□□□ -1.05
MSL3-216ENST00000483645 HRH3Q9Y5N1 445 aa8.48□□□□□ -1.05
MSL3-216ENST00000483645 SENP3-EIF4A1A0A087X0R7 540 aa8.47□□□□□ -1.05
MSL3-216ENST00000483645 PALM3A6NDB9 673 aaPredicted RBP8.47□□□□□ -1.05
MSL3-216ENST00000483645 H7C1W4 665 aa8.47□□□□□ -1.05
MSL3-216ENST00000483645 SMTNP53814 917 aa8.47□□□□□ -1.05
MSL3-216ENST00000483645 SV2AQ7L0J3 742 aa8.47□□□□□ -1.05
MSL3-216ENST00000483645 RHBDD1Q8TEB9 315 aa8.47□□□□□ -1.05
MSL3-216ENST00000483645 PPP1R12CQ9BZL4 782 aa8.47□□□□□ -1.05
MSL3-216ENST00000483645 FHDC1Q9C0D6 1143 aaPredicted RBP8.47□□□□□ -1.05
MSL3-216ENST00000483645 ERBB4Q15303 1308 aa8.47□□□□□ -1.05
MSL3-216ENST00000483645 WIPF1O43516 503 aa8.46□□□□□ -1.06
MSL3-216ENST00000483645 GMPRP36959 345 aa8.46□□□□□ -1.06
MSL3-216ENST00000483645 PHKA2P46019 1235 aa8.46□□□□□ -1.06
MSL3-216ENST00000483645 INSM1Q01101 510 aaPredicted RBP8.46□□□□□ -1.06
MSL3-216ENST00000483645 FOXR1Q6PIV2 292 aa8.46□□□□□ -1.06
MSL3-216ENST00000483645 PPARGC1BQ86YN6 1023 aaKnown RBP8.46□□□□□ -1.06
MSL3-216ENST00000483645 NANOS1Q8WY41 292 aaKnown RBP8.46□□□□□ -1.06
MSL3-216ENST00000483645 GMCL1Q96IK5 515 aa8.46□□□□□ -1.06
MSL3-216ENST00000483645 DNAAF2Q9NVR5 837 aaKnown RBP8.46□□□□□ -1.06
MSL3-216ENST00000483645 MAFBQ9Y5Q3 323 aaPredicted RBP8.46□□□□□ -1.06
MSL3-216ENST00000483645 A0A1B0GTH6 734 aa8.45□□□□□ -1.06
MSL3-216ENST00000483645 TMEM229AB2RXF0 380 aa8.45□□□□□ -1.06
MSL3-216ENST00000483645 VWA5B2Q8N398 1253 aa8.45□□□□□ -1.06
MSL3-216ENST00000483645 LARGE2Q8N3Y3 721 aa8.45□□□□□ -1.06
MSL3-216ENST00000483645 OGFOD1Q8N543 542 aa8.45□□□□□ -1.06
MSL3-216ENST00000483645 SLC4A9Q96Q91 983 aa8.45□□□□□ -1.06
MSL3-216ENST00000483645 A6NJY4 79 aa8.44□□□□□ -1.06
MSL3-216ENST00000483645 F11P03951 625 aa8.44□□□□□ -1.06
MSL3-216ENST00000483645 CSB-PGBD3P0DP91 1061 aa8.44□□□□□ -1.06
MSL3-216ENST00000483645 RASA1P20936 1047 aa8.44□□□□□ -1.06
MSL3-216ENST00000483645 CCDC102BQ68D86 513 aa8.44□□□□□ -1.06
MSL3-216ENST00000483645 LARP1Q6PKG0 1096 aaKnown RBP8.44□□□□□ -1.06
MSL3-216ENST00000483645 PGBD3Q8N328 593 aa8.44□□□□□ -1.06
MSL3-216ENST00000483645 TPCN2Q8NHX9 752 aa8.44□□□□□ -1.06
MSL3-216ENST00000483645 NIFKQ9BYG3 293 aaKnown RBP8.44□□□□□ -1.06
MSL3-216ENST00000483645 LMOD1P29536 600 aaPredicted RBP8.43□□□□□ -1.06
MSL3-216ENST00000483645 C4orf17Q53FE4 359 aa8.43□□□□□ -1.06
MSL3-216ENST00000483645 TRIM22Q8IYM9 498 aa8.43□□□□□ -1.06
MSL3-216ENST00000483645 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.43□□□□□ -1.06
MSL3-216ENST00000483645 ZNF358Q9NW07 568 aa8.43□□□□□ -1.06
MSL3-216ENST00000483645 CDK2AP1O14519 115 aa8.42□□□□□ -1.06
MSL3-216ENST00000483645 PLA2G4AP47712 749 aa8.42□□□□□ -1.06
MSL3-216ENST00000483645 CLDN10P78369 228 aa8.42□□□□□ -1.06
MSL3-216ENST00000483645 LCE2CQ5TA81 110 aa8.42□□□□□ -1.06
MSL3-216ENST00000483645 C14orf37Q86TY3 774 aa8.42□□□□□ -1.06
MSL3-216ENST00000483645 ZNF594Q96JF6 807 aaPredicted RBP8.42□□□□□ -1.06
MSL3-216ENST00000483645 VRTNQ9H8Y1 702 aa8.42□□□□□ -1.06
MSL3-216ENST00000483645 MTFR1Q15390 333 aa8.41□□□□□ -1.06
MSL3-216ENST00000483645 NBPF1Q3BBV0 1214 aa8.41□□□□□ -1.06
MSL3-216ENST00000483645 TRERF1Q96PN7 1200 aa8.41□□□□□ -1.06
MSL3-216ENST00000483645 GPAMQ9HCL2 828 aa8.41□□□□□ -1.06
MSL3-216ENST00000483645 CABP1Q9NZU7 370 aa8.41□□□□□ -1.06
MSL3-216ENST00000483645 SIX5Q8N196 739 aa8.4□□□□□ -1.06
MSL3-216ENST00000483645 AIDAQ96BJ3 306 aa8.4□□□□□ -1.06
MSL3-216ENST00000483645 NUCKS1Q9H1E3 243 aaKnown RBP8.4□□□□□ -1.06
MSL3-216ENST00000483645 CHMP3Q9Y3E7 222 aa8.4□□□□□ -1.06
MSL3-216ENST00000483645 ZBTB7BO15156 539 aaPredicted RBP8.39□□□□□ -1.07
MSL3-216ENST00000483645 EFHC2Q5JST6 749 aa8.39□□□□□ -1.07
MSL3-216ENST00000483645 ERICH6Q7L0X2 663 aa8.39□□□□□ -1.07
MSL3-216ENST00000483645 C1orf216Q8TAB5 229 aa8.39□□□□□ -1.07
MSL3-216ENST00000483645 ZNF837Q96EG3 531 aaPredicted RBP8.39□□□□□ -1.07
MSL3-216ENST00000483645 CCDC97Q96F63 343 aaPredicted RBP8.39□□□□□ -1.07
MSL3-216ENST00000483645 COL25A1Q9BXS0 654 aaPredicted RBP8.39□□□□□ -1.07
MSL3-216ENST00000483645 CUEDC1Q9NWM3 386 aaPredicted RBP8.39□□□□□ -1.07
MSL3-216ENST00000483645 KIAA1024Q9UPX6 916 aa8.39□□□□□ -1.07
MSL3-216ENST00000483645 M0R2N6 131 aa8.38□□□□□ -1.07
MSL3-216ENST00000483645 TATP17735 454 aaPredicted RBP8.38□□□□□ -1.07
MSL3-216ENST00000483645 MSX1P28360 303 aa8.38□□□□□ -1.07
MSL3-216ENST00000483645 SEC13P55735 322 aa8.38□□□□□ -1.07
MSL3-216ENST00000483645 DBN1Q16643 649 aa8.38□□□□□ -1.07
MSL3-216ENST00000483645 GPR161Q8N6U8 529 aaKnown RBP8.38□□□□□ -1.07
MSL3-216ENST00000483645 SCHIP1Q9P0W5 487 aaPredicted RBP8.38□□□□□ -1.07
MSL3-216ENST00000483645 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
MSL3-216ENST00000483645 LBRQ14739 615 aaKnown RBP8.37□□□□□ -1.07
MSL3-216ENST00000483645 TNS4Q8IZW8 715 aa8.37□□□□□ -1.07
MSL3-216ENST00000483645 CNTNAP3BQ96NU0 1288 aa8.37□□□□□ -1.07
MSL3-216ENST00000483645 CNTNAP3Q9BZ76 1288 aa8.37□□□□□ -1.07
MSL3-216ENST00000483645 FAM196BA6NMK8 535 aa8.36□□□□□ -1.07
MSL3-216ENST00000483645 SFI1A8K8P3 1242 aa8.36□□□□□ -1.07
MSL3-216ENST00000483645 RFX1P22670 979 aa8.36□□□□□ -1.07
MSL3-216ENST00000483645 CFAP70Q5T0N1 1121 aa8.36□□□□□ -1.07
MSL3-216ENST00000483645 KANK4Q5T7N3 995 aaPredicted RBP8.36□□□□□ -1.07
MSL3-216ENST00000483645 SLC9A9Q8IVB4 645 aa8.36□□□□□ -1.07
MSL3-216ENST00000483645 ZSCAN1Q8NBB4 408 aa8.36□□□□□ -1.07
MSL3-216ENST00000483645 GTPBP3Q969Y2 492 aaKnown RBP8.36□□□□□ -1.07
MSL3-216ENST00000483645 RUBCNLQ9H714 662 aa8.36□□□□□ -1.07
MSL3-216ENST00000483645 ZNF232Q9UNY5 417 aa8.36□□□□□ -1.07
MSL3-216ENST00000483645 IQSEC3Q9UPP2 1182 aaPredicted RBP8.36□□□□□ -1.07
MSL3-216ENST00000483645 PHF24Q9UPV7 400 aa8.36□□□□□ -1.07
MSL3-216ENST00000483645 USP17L15C9J2P7 530 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms