RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 CHMP4AQ9BY43 222 aa16.67■□□□□ 0.26
CPNE1-225ENST00000483495 CCT4P50991 539 aaKnown RBP16.67■□□□□ 0.26
CPNE1-225ENST00000483495 FLIIQ13045 1269 aa16.67■□□□□ 0.26
CPNE1-225ENST00000483495 CHRNA2Q15822 529 aa16.67■□□□□ 0.26
CPNE1-225ENST00000483495 C1orf115Q9H7X2 142 aa16.67■□□□□ 0.26
CPNE1-225ENST00000483495 BTBD11A6QL63 1104 aa16.66■□□□□ 0.26
CPNE1-225ENST00000483495 TATP17735 454 aaPredicted RBP16.66■□□□□ 0.26
CPNE1-225ENST00000483495 CACNA1FO60840 1977 aa16.66■□□□□ 0.26
CPNE1-225ENST00000483495 MEGF6O75095 1541 aa16.66■□□□□ 0.26
CPNE1-225ENST00000483495 HDGFL1Q5TGJ6 251 aa16.65■□□□□ 0.26
CPNE1-225ENST00000483495 HEG1Q9ULI3 1381 aa16.65■□□□□ 0.26
CPNE1-225ENST00000483495 ATP10DQ9P241 1426 aa16.65■□□□□ 0.26
CPNE1-225ENST00000483495 NHSL1Q5SYE7 1610 aa16.65■□□□□ 0.26
CPNE1-225ENST00000483495 SPG7Q9UQ90 795 aa16.65■□□□□ 0.26
CPNE1-225ENST00000483495 VIRMAQ69YN4 1812 aaKnown RBP16.64■□□□□ 0.25
CPNE1-225ENST00000483495 SIPA1L3O60292 1781 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-225ENST00000483495 CSB-PGBD3P0DP91 1061 aa16.64■□□□□ 0.25
CPNE1-225ENST00000483495 PXDNLA1KZ92 1463 aa16.63■□□□□ 0.25
CPNE1-225ENST00000483495 KCNQ3O43525 872 aa16.63■□□□□ 0.25
CPNE1-225ENST00000483495 CHD1LQ86WJ1 897 aa16.63■□□□□ 0.25
CPNE1-225ENST00000483495 RPAP2Q8IXW5 612 aaPredicted RBP16.63■□□□□ 0.25
CPNE1-225ENST00000483495 ANKRD44Q8N8A2 993 aa16.63■□□□□ 0.25
CPNE1-225ENST00000483495 F6X3S4 739 aa16.63■□□□□ 0.25
CPNE1-225ENST00000483495 PHKG2P15735 406 aa16.63■□□□□ 0.25
CPNE1-225ENST00000483495 KDM6AO15550 1401 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-225ENST00000483495 FKBP5Q13451 457 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-225ENST00000483495 NPM2Q86SE8 214 aaKnown RBP16.62■□□□□ 0.25
CPNE1-225ENST00000483495 MEIS3Q99687 375 aa16.62■□□□□ 0.25
CPNE1-225ENST00000483495 PKD1L3Q7Z443 1732 aa16.62■□□□□ 0.25
CPNE1-225ENST00000483495 ABCA3Q99758 1704 aa16.62■□□□□ 0.25
CPNE1-225ENST00000483495 MYT1Q01538 1121 aa16.61■□□□□ 0.25
CPNE1-225ENST00000483495 CEP85Q6P2H3 762 aa16.61■□□□□ 0.25
CPNE1-225ENST00000483495 NECTIN2Q92692 538 aa16.61■□□□□ 0.25
CPNE1-225ENST00000483495 PRDM11Q9NQV5 511 aa16.61■□□□□ 0.25
CPNE1-225ENST00000483495 WDR17Q8IZU2 1322 aa16.61■□□□□ 0.25
CPNE1-225ENST00000483495 IFNL2Q8IZJ0 200 aa16.61■□□□□ 0.25
CPNE1-225ENST00000483495 DCTPP1Q9H773 170 aa16.61■□□□□ 0.25
CPNE1-225ENST00000483495 N4BP2Q86UW6 1770 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-225ENST00000483495 COL5A2P05997 1499 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-225ENST00000483495 SLC4A10Q6U841 1118 aa16.6■□□□□ 0.25
CPNE1-225ENST00000483495 MRC1P22897 1456 aa16.59■□□□□ 0.25
CPNE1-225ENST00000483495 SCN11AQ9UI33 1791 aa16.59■□□□□ 0.25
CPNE1-225ENST00000483495 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
CPNE1-225ENST00000483495 LNPKQ9C0E8 428 aa16.59■□□□□ 0.25
CPNE1-225ENST00000483495 SLC52A2Q9HAB3 445 aa16.59■□□□□ 0.25
CPNE1-225ENST00000483495 NOP58Q9Y2X3 529 aaKnown RBP16.59■□□□□ 0.25
CPNE1-225ENST00000483495 CYP27B1O15528 508 aa16.58■□□□□ 0.24
CPNE1-225ENST00000483495 ANKRD45Q5TZF3 282 aa16.58■□□□□ 0.24
CPNE1-225ENST00000483495 DCAF5Q96JK2 942 aa16.58■□□□□ 0.24
CPNE1-225ENST00000483495 HSP90AB1P08238 724 aaKnown RBP16.57■□□□□ 0.24
CPNE1-225ENST00000483495 EIF2S2P20042 333 aaKnown RBP16.57■□□□□ 0.24
CPNE1-225ENST00000483495 PHAXQ9H814 394 aaKnown RBP16.57■□□□□ 0.24
CPNE1-225ENST00000483495 CHPF2Q9P2E5 772 aa16.57■□□□□ 0.24
CPNE1-225ENST00000483495 GNAI3P08754 354 aa16.56■□□□□ 0.24
CPNE1-225ENST00000483495 DDRGK1Q96HY6 314 aa16.56■□□□□ 0.24
CPNE1-225ENST00000483495 DBF4Q9UBU7 674 aaPredicted RBP16.56■□□□□ 0.24
CPNE1-225ENST00000483495 ZBTB47Q9UFB7 747 aaPredicted RBP16.56■□□□□ 0.24
CPNE1-225ENST00000483495 SEC24BO95487 1268 aa16.55■□□□□ 0.24
CPNE1-225ENST00000483495 GNAI2P04899 355 aa16.55■□□□□ 0.24
CPNE1-225ENST00000483495 ZNF790Q6PG37 636 aa16.55■□□□□ 0.24
CPNE1-225ENST00000483495 CARD10Q9BWT7 1032 aa16.55■□□□□ 0.24
CPNE1-225ENST00000483495 PARP4Q9UKK3 1724 aaKnown RBP16.55■□□□□ 0.24
CPNE1-225ENST00000483495 HMMRO75330 724 aa16.54■□□□□ 0.24
CPNE1-225ENST00000483495 TOM1L2Q6ZVM7 507 aa16.54■□□□□ 0.24
CPNE1-225ENST00000483495 BMP2KLQ5H9B9 411 aa16.53■□□□□ 0.24
CPNE1-225ENST00000483495 NFATC2IPQ8NCF5 419 aa16.53■□□□□ 0.24
CPNE1-225ENST00000483495 ANP32EQ9BTT0 268 aa16.52■□□□□ 0.24
CPNE1-225ENST00000483495 USP44Q9H0E7 712 aa16.52■□□□□ 0.24
CPNE1-225ENST00000483495 AHDC1Q5TGY3 1603 aaPredicted RBP16.52■□□□□ 0.24
CPNE1-225ENST00000483495 LTBP4Q8N2S1 1624 aa16.52■□□□□ 0.23
CPNE1-225ENST00000483495 ERICH6Q7L0X2 663 aa16.52■□□□□ 0.23
CPNE1-225ENST00000483495 DNAAF4Q8WXU2 420 aa16.52■□□□□ 0.23
CPNE1-225ENST00000483495 PCDH11XQ9BZA7 1347 aa16.52■□□□□ 0.23
CPNE1-225ENST00000483495 PCDH11YQ9BZA8 1340 aa16.52■□□□□ 0.23
CPNE1-225ENST00000483495 ADCY9O60503 1353 aa16.51■□□□□ 0.23
CPNE1-225ENST00000483495 BEND3Q5T5X7 828 aa16.51■□□□□ 0.23
CPNE1-225ENST00000483495 ZCRB1Q8TBF4 217 aaKnown RBP16.51■□□□□ 0.23
CPNE1-225ENST00000483495 SRCIN1Q9C0H9 1055 aa16.51■□□□□ 0.23
CPNE1-225ENST00000483495 HYPKQ9NX55 129 aa16.51■□□□□ 0.23
CPNE1-225ENST00000483495 PRAMEF22A3QJZ6 481 aa16.5■□□□□ 0.23
CPNE1-225ENST00000483495 PI4KAP2A4QPH2 592 aa16.5■□□□□ 0.23
CPNE1-225ENST00000483495 SLC39A6Q13433 755 aa16.5■□□□□ 0.23
CPNE1-225ENST00000483495 NKX1-1Q15270 411 aaPredicted RBP16.5■□□□□ 0.23
CPNE1-225ENST00000483495 PI4KAP1Q8N8J0 262 aa16.5■□□□□ 0.23
CPNE1-225ENST00000483495 DDX21Q9NR30 783 aaKnown RBP eCLIP16.5■□□□□ 0.23
CPNE1-225ENST00000483495 IL2RBP14784 551 aa16.5■□□□□ 0.23
CPNE1-225ENST00000483495 ATP8B2P98198 1209 aa16.5■□□□□ 0.23
CPNE1-225ENST00000483495 ROBO1Q9Y6N7 1651 aa16.5■□□□□ 0.23
CPNE1-225ENST00000483495 ANXA1P04083 346 aa16.49■□□□□ 0.23
CPNE1-225ENST00000483495 PDIA6Q15084 440 aa16.49■□□□□ 0.23
CPNE1-225ENST00000483495 PROSER3Q2NL68 480 aa16.49■□□□□ 0.23
CPNE1-225ENST00000483495 LARP1Q6PKG0 1096 aaKnown RBP16.49■□□□□ 0.23
CPNE1-225ENST00000483495 UPF2Q9HAU5 1272 aaKnown RBP16.49■□□□□ 0.23
CPNE1-225ENST00000483495 UBTFL1P0CB47 393 aaPredicted RBP16.48■□□□□ 0.23
CPNE1-225ENST00000483495 PLEKHM2Q8IWE5 1019 aa16.48■□□□□ 0.23
CPNE1-225ENST00000483495 TBC1D32Q96NH3 1257 aa16.48■□□□□ 0.23
CPNE1-225ENST00000483495 COL22A1Q8NFW1 1626 aaPredicted RBP16.48■□□□□ 0.23
CPNE1-225ENST00000483495 CABP4P57796 275 aa16.48■□□□□ 0.23
CPNE1-225ENST00000483495 KSR2Q6VAB6 950 aa16.48■□□□□ 0.23
CPNE1-225ENST00000483495 ZNF496Q96IT1 587 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms