RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 VIRMAQ69YN4 1812 aaKnown RBP13.45□□□□□ -0.26
HLA-DQA1-206ENST00000482745 LOC102724428A0A0B4J2F2 783 aa13.45□□□□□ -0.26
HLA-DQA1-206ENST00000482745 SIK1P57059 783 aa13.45□□□□□ -0.26
HLA-DQA1-206ENST00000482745 CABP4P57796 275 aa13.45□□□□□ -0.26
HLA-DQA1-206ENST00000482745 CFAP53Q96M91 514 aa13.44□□□□□ -0.26
HLA-DQA1-206ENST00000482745 ATG3Q9NT62 314 aa13.44□□□□□ -0.26
HLA-DQA1-206ENST00000482745 HMGB2P26583 209 aaKnown RBP13.43□□□□□ -0.26
HLA-DQA1-206ENST00000482745 AK7Q96M32 723 aa13.43□□□□□ -0.26
HLA-DQA1-206ENST00000482745 PPP2R1AP30153 589 aa13.43□□□□□ -0.26
HLA-DQA1-206ENST00000482745 AKAP4Q5JQC9 854 aa13.43□□□□□ -0.26
HLA-DQA1-206ENST00000482745 SLC16A10Q8TF71 515 aa13.43□□□□□ -0.26
HLA-DQA1-206ENST00000482745 SGIP1Q9BQI5 828 aa13.43□□□□□ -0.26
HLA-DQA1-206ENST00000482745 UBR3Q6ZT12 1888 aa13.43□□□□□ -0.26
HLA-DQA1-206ENST00000482745 ATP6V1AP38606 617 aa13.42□□□□□ -0.26
HLA-DQA1-206ENST00000482745 RBM42Q9BTD8 480 aaKnown RBP13.42□□□□□ -0.26
HLA-DQA1-206ENST00000482745 RBM19Q9Y4C8 960 aaKnown RBP13.42□□□□□ -0.26
HLA-DQA1-206ENST00000482745 COL23A1Q86Y22 540 aaPredicted RBP13.42□□□□□ -0.26
HLA-DQA1-206ENST00000482745 LINC00116Q8NCU8 138 aa13.42□□□□□ -0.26
HLA-DQA1-206ENST00000482745 COL24A1Q17RW2 1714 aa13.41□□□□□ -0.26
HLA-DQA1-206ENST00000482745 ITPK1Q13572 414 aa13.41□□□□□ -0.26
HLA-DQA1-206ENST00000482745 MTHFSDQ2M296 383 aaKnown RBP13.41□□□□□ -0.26
HLA-DQA1-206ENST00000482745 NFATC2IPQ8NCF5 419 aa13.41□□□□□ -0.26
HLA-DQA1-206ENST00000482745 ARXQ96QS3 562 aa13.41□□□□□ -0.26
HLA-DQA1-206ENST00000482745 PHF14O94880 888 aa13.4□□□□□ -0.26
HLA-DQA1-206ENST00000482745 POLD1P28340 1107 aa13.4□□□□□ -0.26
HLA-DQA1-206ENST00000482745 FHDC1Q9C0D6 1143 aaPredicted RBP13.4□□□□□ -0.26
HLA-DQA1-206ENST00000482745 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.27
HLA-DQA1-206ENST00000482745 COL5A3P25940 1745 aaPredicted RBP13.39□□□□□ -0.27
HLA-DQA1-206ENST00000482745 MSL1Q68DK7 614 aa13.39□□□□□ -0.27
HLA-DQA1-206ENST00000482745 SMIM5Q71RC9 77 aa13.39□□□□□ -0.27
HLA-DQA1-206ENST00000482745 AMIGO3Q86WK7 504 aa13.39□□□□□ -0.27
HLA-DQA1-206ENST00000482745 KLHL34Q8N239 644 aa13.39□□□□□ -0.27
HLA-DQA1-206ENST00000482745 LGR6Q9HBX8 967 aa13.39□□□□□ -0.27
HLA-DQA1-206ENST00000482745 MRC1P22897 1456 aa13.39□□□□□ -0.27
HLA-DQA1-206ENST00000482745 GNPATO15228 680 aa13.39□□□□□ -0.27
HLA-DQA1-206ENST00000482745 PTCD1O75127 700 aaKnown RBP13.39□□□□□ -0.27
HLA-DQA1-206ENST00000482745 FLAD1Q8NFF5 587 aa13.39□□□□□ -0.27
HLA-DQA1-206ENST00000482745 SLC4A9Q96Q91 983 aa13.39□□□□□ -0.27
HLA-DQA1-206ENST00000482745 NUDCQ9Y266 331 aa13.39□□□□□ -0.27
HLA-DQA1-206ENST00000482745 ADAMTS7Q9UKP4 1686 aa13.38□□□□□ -0.27
HLA-DQA1-206ENST00000482745 RNMTO43148 476 aaKnown RBP13.38□□□□□ -0.27
HLA-DQA1-206ENST00000482745 FKBP8Q14318 412 aa13.38□□□□□ -0.27
HLA-DQA1-206ENST00000482745 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.37□□□□□ -0.27
HLA-DQA1-206ENST00000482745 NEFLP07196 543 aa13.37□□□□□ -0.27
HLA-DQA1-206ENST00000482745 U2AF1L5P0DN76 240 aaPredicted RBP13.37□□□□□ -0.27
HLA-DQA1-206ENST00000482745 PRKAR2BP31323 418 aa13.37□□□□□ -0.27
HLA-DQA1-206ENST00000482745 U2AF1Q01081 240 aaKnown RBP eCLIP13.37□□□□□ -0.27
HLA-DQA1-206ENST00000482745 SYT17Q9BSW7 474 aa13.37□□□□□ -0.27
HLA-DQA1-206ENST00000482745 SLC52A2Q9HAB3 445 aa13.37□□□□□ -0.27
HLA-DQA1-206ENST00000482745 GAS2L2Q8NHY3 880 aa13.37□□□□□ -0.27
HLA-DQA1-206ENST00000482745 MAP3K5Q99683 1374 aa13.36□□□□□ -0.27
HLA-DQA1-206ENST00000482745 DCAF8L1A6NGE4 600 aa13.36□□□□□ -0.27
HLA-DQA1-206ENST00000482745 SSFA2P28290 1259 aa13.36□□□□□ -0.27
HLA-DQA1-206ENST00000482745 TJP1Q07157 1748 aa13.36□□□□□ -0.27
HLA-DQA1-206ENST00000482745 DDX10Q13206 875 aaKnown RBP13.36□□□□□ -0.27
HLA-DQA1-206ENST00000482745 RSPH6AQ9H0K4 717 aa13.36□□□□□ -0.27
HLA-DQA1-206ENST00000482745 SLC39A6Q13433 755 aa13.34□□□□□ -0.27
HLA-DQA1-206ENST00000482745 PHACTR3Q96KR7 559 aa13.34□□□□□ -0.27
HLA-DQA1-206ENST00000482745 CICQ96RK0 1608 aaPredicted RBP13.34□□□□□ -0.27
HLA-DQA1-206ENST00000482745 MYH14Q7Z406 1995 aaKnown RBP13.34□□□□□ -0.27
HLA-DQA1-206ENST00000482745 GNAT3A8MTJ3 354 aa13.34□□□□□ -0.27
HLA-DQA1-206ENST00000482745 RTCBQ9Y3I0 505 aaKnown RBP13.34□□□□□ -0.27
HLA-DQA1-206ENST00000482745 CNTNAP4Q9C0A0 1308 aa13.33□□□□□ -0.28
HLA-DQA1-206ENST00000482745 C4AP0C0L4 1744 aa13.33□□□□□ -0.28
HLA-DQA1-206ENST00000482745 SIPA1L3O60292 1781 aaPredicted RBP13.33□□□□□ -0.28
HLA-DQA1-206ENST00000482745 TEFQ10587 303 aa13.33□□□□□ -0.28
HLA-DQA1-206ENST00000482745 KCPQ6ZWJ8 1503 aa13.32□□□□□ -0.28
HLA-DQA1-206ENST00000482745 UBR2Q8IWV8 1755 aa13.32□□□□□ -0.28
HLA-DQA1-206ENST00000482745 FANCIQ9NVI1 1328 aa13.32□□□□□ -0.28
HLA-DQA1-206ENST00000482745 FCHSD2O94868 740 aa13.31□□□□□ -0.28
HLA-DQA1-206ENST00000482745 CRKLP46109 303 aaKnown RBP13.31□□□□□ -0.28
HLA-DQA1-206ENST00000482745 TRAPPC3LQ5T215 181 aa13.31□□□□□ -0.28
HLA-DQA1-206ENST00000482745 RC3H1Q5TC82 1133 aaKnown RBP13.31□□□□□ -0.28
HLA-DQA1-206ENST00000482745 IL17REQ8NFR9 667 aa13.31□□□□□ -0.28
HLA-DQA1-206ENST00000482745 DNAJC10Q8IXB1 793 aa13.31□□□□□ -0.28
HLA-DQA1-206ENST00000482745 TTC5Q8N0Z6 440 aa13.31□□□□□ -0.28
HLA-DQA1-206ENST00000482745 RPS6KA4O75676 772 aa13.3□□□□□ -0.28
HLA-DQA1-206ENST00000482745 RALBP1Q15311 655 aa13.3□□□□□ -0.28
HLA-DQA1-206ENST00000482745 NLGN2Q8NFZ4 835 aa13.3□□□□□ -0.28
HLA-DQA1-206ENST00000482745 UTRNP46939 3433 aa13.3□□□□□ -0.28
HLA-DQA1-206ENST00000482745 ADRA2BP18089 450 aa13.3□□□□□ -0.28
HLA-DQA1-206ENST00000482745 RFC4P35249 363 aa13.29□□□□□ -0.28
HLA-DQA1-206ENST00000482745 ARHGEF1Q92888 912 aaKnown RBP13.29□□□□□ -0.28
HLA-DQA1-206ENST00000482745 CEMIPQ8WUJ3 1361 aa13.29□□□□□ -0.28
HLA-DQA1-206ENST00000482745 NEFMP07197 916 aa13.28□□□□□ -0.28
HLA-DQA1-206ENST00000482745 RTF1Q92541 710 aaKnown RBP13.28□□□□□ -0.28
HLA-DQA1-206ENST00000482745 MCM10Q7L590 875 aa13.28□□□□□ -0.28
HLA-DQA1-206ENST00000482745 CCDC87Q9NVE4 849 aa13.28□□□□□ -0.28
HLA-DQA1-206ENST00000482745 DLG5Q8TDM6 1919 aa13.28□□□□□ -0.28
HLA-DQA1-206ENST00000482745 GOLGB1Q14789 3259 aaKnown RBP13.27□□□□□ -0.28
HLA-DQA1-206ENST00000482745 GPR162Q16538 588 aa13.27□□□□□ -0.28
HLA-DQA1-206ENST00000482745 MYBBP1AQ9BQG0 1328 aaKnown RBP13.27□□□□□ -0.29
HLA-DQA1-206ENST00000482745 MMP10P09238 476 aa13.27□□□□□ -0.29
HLA-DQA1-206ENST00000482745 INTS5Q6P9B9 1019 aaKnown RBP13.27□□□□□ -0.29
HLA-DQA1-206ENST00000482745 ZNF790Q6PG37 636 aa13.27□□□□□ -0.29
HLA-DQA1-206ENST00000482745 BTBD11A6QL63 1104 aa13.26□□□□□ -0.29
HLA-DQA1-206ENST00000482745 CYP19A1P11511 503 aaPredicted RBP13.26□□□□□ -0.29
HLA-DQA1-206ENST00000482745 YY1P25490 414 aa13.26□□□□□ -0.29
HLA-DQA1-206ENST00000482745 DCTN1Q14203 1278 aa13.26□□□□□ -0.29
HLA-DQA1-206ENST00000482745 VSIG10Q8N0Z9 540 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms