RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 NPC1L1Q9UHC9 1359 aa16.44■□□□□ 0.22
FAM3D-202ENST00000482623 ITPK1Q13572 414 aa16.44■□□□□ 0.22
FAM3D-202ENST00000482623 NLGN1Q8N2Q7 840 aa16.44■□□□□ 0.22
FAM3D-202ENST00000482623 TRAPPC3LQ5T215 181 aa16.43■□□□□ 0.22
FAM3D-202ENST00000482623 SULT6B1Q6IMI4 303 aa16.43■□□□□ 0.22
FAM3D-202ENST00000482623 KLHL34Q8N239 644 aa16.43■□□□□ 0.22
FAM3D-202ENST00000482623 NLGN2Q8NFZ4 835 aa16.43■□□□□ 0.22
FAM3D-202ENST00000482623 RTCBQ9Y3I0 505 aaKnown RBP16.43■□□□□ 0.22
FAM3D-202ENST00000482623 C5P01031 1676 aa16.43■□□□□ 0.22
FAM3D-202ENST00000482623 AKAP4Q5JQC9 854 aa16.42■□□□□ 0.22
FAM3D-202ENST00000482623 ITGB4P16144 1822 aa16.42■□□□□ 0.22
FAM3D-202ENST00000482623 C4BP0C0L5 1744 aa16.42■□□□□ 0.22
FAM3D-202ENST00000482623 TOGARAM1Q9Y4F4 1720 aa16.42■□□□□ 0.22
FAM3D-202ENST00000482623 GNPATO15228 680 aa16.41■□□□□ 0.22
FAM3D-202ENST00000482623 RPS6KA4O75676 772 aa16.41■□□□□ 0.22
FAM3D-202ENST00000482623 MSL1Q68DK7 614 aa16.41■□□□□ 0.22
FAM3D-202ENST00000482623 CNTNAP4Q9C0A0 1308 aa16.41■□□□□ 0.22
FAM3D-202ENST00000482623 GOLGB1Q14789 3259 aaKnown RBP16.4■□□□□ 0.22
FAM3D-202ENST00000482623 AMIGO3Q86WK7 504 aa16.4■□□□□ 0.22
FAM3D-202ENST00000482623 NFATC2IPQ8NCF5 419 aa16.4■□□□□ 0.22
FAM3D-202ENST00000482623 TAF1LQ8IZX4 1826 aa16.4■□□□□ 0.22
FAM3D-202ENST00000482623 TUBGCP6Q96RT7 1819 aa16.4■□□□□ 0.22
FAM3D-202ENST00000482623 PHF14O94880 888 aa16.39■□□□□ 0.21
FAM3D-202ENST00000482623 AEBP1Q8IUX7 1158 aa16.39■□□□□ 0.21
FAM3D-202ENST00000482623 SLC4A9Q96Q91 983 aa16.39■□□□□ 0.21
FAM3D-202ENST00000482623 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
FAM3D-202ENST00000482623 ZNF831Q5JPB2 1677 aa16.39■□□□□ 0.21
FAM3D-202ENST00000482623 TGFB2P61812 414 aa16.38■□□□□ 0.21
FAM3D-202ENST00000482623 KDM6AO15550 1401 aaPredicted RBP16.37■□□□□ 0.21
FAM3D-202ENST00000482623 CHD4Q14839 1912 aa16.37■□□□□ 0.21
FAM3D-202ENST00000482623 DIAPH1O60610 1272 aaKnown RBP16.37■□□□□ 0.21
FAM3D-202ENST00000482623 YBX3P16989 372 aaKnown RBP eCLIP16.37■□□□□ 0.21
FAM3D-202ENST00000482623 PELP1Q8IZL8 1130 aaKnown RBP16.37■□□□□ 0.21
FAM3D-202ENST00000482623 RFC4P35249 363 aa16.36■□□□□ 0.21
FAM3D-202ENST00000482623 ARHGEF1Q92888 912 aaKnown RBP16.36■□□□□ 0.21
FAM3D-202ENST00000482623 SLC52A2Q9HAB3 445 aa16.36■□□□□ 0.21
FAM3D-202ENST00000482623 UBR3Q6ZT12 1888 aa16.34■□□□□ 0.21
FAM3D-202ENST00000482623 MMP10P09238 476 aa16.34■□□□□ 0.21
FAM3D-202ENST00000482623 VSIG10Q8N0Z9 540 aa16.34■□□□□ 0.21
FAM3D-202ENST00000482623 GYS1P13807 737 aa16.33■□□□□ 0.2
FAM3D-202ENST00000482623 C1QTNF8P60827 252 aa16.33■□□□□ 0.2
FAM3D-202ENST00000482623 RNMTO43148 476 aaKnown RBP16.32■□□□□ 0.2
FAM3D-202ENST00000482623 PTCD1O75127 700 aaKnown RBP16.32■□□□□ 0.2
FAM3D-202ENST00000482623 CRKLP46109 303 aaKnown RBP16.32■□□□□ 0.2
FAM3D-202ENST00000482623 CCDC87Q9NVE4 849 aa16.32■□□□□ 0.2
FAM3D-202ENST00000482623 CC2D1BQ5T0F9 858 aaKnown RBP16.31■□□□□ 0.2
FAM3D-202ENST00000482623 SMIM5Q71RC9 77 aa16.31■□□□□ 0.2
FAM3D-202ENST00000482623 MTHFSDQ2M296 383 aaKnown RBP16.3■□□□□ 0.2
FAM3D-202ENST00000482623 LGR6Q9HBX8 967 aa16.3■□□□□ 0.2
FAM3D-202ENST00000482623 PARP3Q9Y6F1 533 aa16.3■□□□□ 0.2
FAM3D-202ENST00000482623 GIGYF1O75420 1035 aaPredicted RBP16.29■□□□□ 0.2
FAM3D-202ENST00000482623 HMOX1P09601 288 aa16.29■□□□□ 0.2
FAM3D-202ENST00000482623 INTS5Q6P9B9 1019 aaKnown RBP16.29■□□□□ 0.2
FAM3D-202ENST00000482623 GAS2L2Q8NHY3 880 aa16.29■□□□□ 0.2
FAM3D-202ENST00000482623 TEX13AQ9BXU3 409 aaPredicted RBP16.28■□□□□ 0.2
FAM3D-202ENST00000482623 USP42Q9H9J4 1324 aaKnown RBP16.27■□□□□ 0.2
FAM3D-202ENST00000482623 CYP19A1P11511 503 aaPredicted RBP16.27■□□□□ 0.2
FAM3D-202ENST00000482623 CFAP53Q96M91 514 aa16.27■□□□□ 0.2
FAM3D-202ENST00000482623 GNAT3A8MTJ3 354 aa16.26■□□□□ 0.19
FAM3D-202ENST00000482623 ZPR1O75312 459 aa16.26■□□□□ 0.19
FAM3D-202ENST00000482623 TM4SF1P30408 202 aa16.26■□□□□ 0.19
FAM3D-202ENST00000482623 NUDCQ9Y266 331 aa16.26■□□□□ 0.19
FAM3D-202ENST00000482623 MRC1P22897 1456 aa16.25■□□□□ 0.19
FAM3D-202ENST00000482623 STARD3NLO95772 234 aa16.25■□□□□ 0.19
FAM3D-202ENST00000482623 CICQ96RK0 1608 aaPredicted RBP16.25■□□□□ 0.19
FAM3D-202ENST00000482623 C10orf71Q711Q0 1435 aa16.25■□□□□ 0.19
FAM3D-202ENST00000482623 ADCY9O60503 1353 aa16.25■□□□□ 0.19
FAM3D-202ENST00000482623 DNAJC10Q8IXB1 793 aa16.24■□□□□ 0.19
FAM3D-202ENST00000482623 NARFQ9UHQ1 456 aa16.24■□□□□ 0.19
FAM3D-202ENST00000482623 SOS1Q07889 1333 aaPredicted RBP16.23■□□□□ 0.19
FAM3D-202ENST00000482623 A0A087WZG4 1122 aa16.23■□□□□ 0.19
FAM3D-202ENST00000482623 U2SURPO15042 1029 aaKnown RBP16.23■□□□□ 0.19
FAM3D-202ENST00000482623 FKBP8Q14318 412 aa16.23■□□□□ 0.19
FAM3D-202ENST00000482623 TTC5Q8N0Z6 440 aa16.23■□□□□ 0.19
FAM3D-202ENST00000482623 GPBP1L1Q9HC44 474 aaPredicted RBP16.23■□□□□ 0.19
FAM3D-202ENST00000482623 PIM2Q9P1W9 311 aa16.23■□□□□ 0.19
FAM3D-202ENST00000482623 PXDNLA1KZ92 1463 aa16.22■□□□□ 0.19
FAM3D-202ENST00000482623 COL5A3P25940 1745 aaPredicted RBP16.22■□□□□ 0.19
FAM3D-202ENST00000482623 A0A0G2JLW4 131 aa16.22■□□□□ 0.19
FAM3D-202ENST00000482623 FCHSD2O94868 740 aa16.22■□□□□ 0.19
FAM3D-202ENST00000482623 TEFQ10587 303 aa16.22■□□□□ 0.19
FAM3D-202ENST00000482623 IL17REQ8NFR9 667 aa16.22■□□□□ 0.19
FAM3D-202ENST00000482623 COL3A1P02461 1466 aaPredicted RBP16.22■□□□□ 0.19
FAM3D-202ENST00000482623 ATP10DQ9P241 1426 aa16.21■□□□□ 0.19
FAM3D-202ENST00000482623 SCN11AQ9UI33 1791 aa16.21■□□□□ 0.19
FAM3D-202ENST00000482623 HTATSF1O43719 755 aaKnown RBP16.21■□□□□ 0.19
FAM3D-202ENST00000482623 DPEP1P16444 411 aa16.21■□□□□ 0.19
FAM3D-202ENST00000482623 KCNA3P22001 575 aa16.21■□□□□ 0.19
FAM3D-202ENST00000482623 SLC39A6Q13433 755 aa16.21■□□□□ 0.19
FAM3D-202ENST00000482623 ZNF790Q6PG37 636 aa16.21■□□□□ 0.19
FAM3D-202ENST00000482623 POLRMTO00411 1230 aaKnown RBP16.2■□□□□ 0.18
FAM3D-202ENST00000482623 SRP68Q9UHB9 627 aaKnown RBP16.2■□□□□ 0.18
FAM3D-202ENST00000482623 PDZRN3Q9UPQ7 1066 aa16.2■□□□□ 0.18
FAM3D-202ENST00000482623 CEMIPQ8WUJ3 1361 aa16.2■□□□□ 0.18
FAM3D-202ENST00000482623 ADAMTS7Q9UKP4 1686 aa16.2■□□□□ 0.18
FAM3D-202ENST00000482623 MYH14Q7Z406 1995 aaKnown RBP16.2■□□□□ 0.18
FAM3D-202ENST00000482623 EIF5P55010 431 aaKnown RBP16.19■□□□□ 0.18
FAM3D-202ENST00000482623 DALRD3Q5D0E6 543 aaKnown RBP16.19■□□□□ 0.18
FAM3D-202ENST00000482623 USPL1Q5W0Q7 1092 aa16.19■□□□□ 0.18
FAM3D-202ENST00000482623 RSPH6AQ9H0K4 717 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms